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Items: 1 to 50 of 103

1.

Makes caterpillars floppy-like effector-containing MARTX toxins require host ADP-ribosylation factor (ARF) proteins for systemic pathogenicity.

Lee Y, Kim BS, Choi S, Lee EY, Park S, Hwang J, Kwon Y, Hyun J, Lee C, Kim JF, Eom SH, Kim MH.

Proc Natl Acad Sci U S A. 2019 Sep 3;116(36):18031-18040. doi: 10.1073/pnas.1905095116. Epub 2019 Aug 19.

2.

Consent insufficient for data release-Response.

Amann RI, Baichoo S, Blencowe BJ, Bork P, Borodovsky M, Brooksbank C, Chain PSG, Colwell RR, Daffonchio DG, Danchin A, de Lorenzo V, Dorrestein PC, Finn RD, Fraser CM, Gilbert JA, Hallam SJ, Hugenholtz P, Ioannidis JPA, Jansson JK, Kim JF, Klenk HP, Klotz MG, Knight R, Konstantinidis KT, Kyrpides NC, Mason CE, McHardy AC, Meyer F, Ouzounis CA, Patrinos AAN, Podar M, Pollard KS, Ravel J, Muñoz AR, Roberts RJ, Rosselló-Móra R, Sansone SA, Schloss PD, Schriml LM, Setubal JC, Sorek R, Stevens RL, Tiedje JM, Turjanski A, Tyson GW, Ussery DW, Weinstock GM, White O, Whitman WB, Xenarios I.

Science. 2019 May 3;364(6439):446. doi: 10.1126/science.aax7509. No abstract available.

PMID:
31048484
3.

Correction to Polyethylene Battery Separator as a Porous Support for Thin Film Composite Organic Solvent Nanofiltration Membranes.

Park SH, Kim YJ, Kwon SJ, Shin MG, Nam SE, Cho YH, Park YI, Kim JF, Lee JH.

ACS Appl Mater Interfaces. 2019 Feb 20;11(7):7636. doi: 10.1021/acsami.9b01231. Epub 2019 Feb 5. No abstract available.

PMID:
30721019
4.

Toward unrestricted use of public genomic data.

Amann RI, Baichoo S, Blencowe BJ, Bork P, Borodovsky M, Brooksbank C, Chain PSG, Colwell RR, Daffonchio DG, Danchin A, de Lorenzo V, Dorrestein PC, Finn RD, Fraser CM, Gilbert JA, Hallam SJ, Hugenholtz P, Ioannidis JPA, Jansson JK, Kim JF, Klenk HP, Klotz MG, Knight R, Konstantinidis KT, Kyrpides NC, Mason CE, McHardy AC, Meyer F, Ouzounis CA, Patrinos AAN, Podar M, Pollard KS, Ravel J, Muñoz AR, Roberts RJ, Rosselló-Móra R, Sansone SA, Schloss PD, Schriml LM, Setubal JC, Sorek R, Stevens RL, Tiedje JM, Turjanski A, Tyson GW, Ussery DW, Weinstock GM, White O, Whitman WB, Xenarios I.

Science. 2019 Jan 25;363(6425):350-352. doi: 10.1126/science.aaw1280. No abstract available.

5.

Bio-Inspired Robust Membranes Nanoengineered from Interpenetrating Polymer Networks of Polybenzimidazole/Polydopamine.

Zhao D, Kim JF, Ignacz G, Pogany P, Lee YM, Szekely G.

ACS Nano. 2019 Jan 22;13(1):125-133. doi: 10.1021/acsnano.8b04123. Epub 2019 Jan 8.

PMID:
30605324
6.

Polyethylene Battery Separator as a Porous Support for Thin Film Composite Organic Solvent Nanofiltration Membranes.

Park SH, Kim YJ, Kwon SJ, Shin MG, Nam SE, Cho YH, Park YI, Kim JF, Lee JH.

ACS Appl Mater Interfaces. 2018 Dec 19;10(50):44050-44058. doi: 10.1021/acsami.8b16403. Epub 2018 Dec 5. Erratum in: ACS Appl Mater Interfaces. 2019 Feb 20;11(7):7636.

PMID:
30462483
7.

Author Correction: Rhizosphere microbiome structure alters to enable wilt resistance in tomato.

Kwak MJ, Kong HG, Choi K, Kwon SK, Song JY, Lee J, Lee PA, Choi SY, Seo M, Lee HJ, Jung EJ, Park H, Roy N, Kim H, Lee MM, Rubin EM, Lee SW, Kim JF.

Nat Biotechnol. 2018 Nov 9;36(11):1117. doi: 10.1038/nbt1118-1117. No abstract available.

PMID:
30412196
8.

Rhizosphere microbiome structure alters to enable wilt resistance in tomato.

Kwak MJ, Kong HG, Choi K, Kwon SK, Song JY, Lee J, Lee PA, Choi SY, Seo M, Lee HJ, Jung EJ, Park H, Roy N, Kim H, Lee MM, Rubin EM, Lee SW, Kim JF.

Nat Biotechnol. 2018 Oct 8. doi: 10.1038/nbt.4232. [Epub ahead of print]

PMID:
30295674
9.

Complete genome sequence of the sand-sediment actinobacterium Nocardioides dokdonensis FR1436T.

Kwak MJ, Kwon SK, Kim JF.

Stand Genomic Sci. 2017 Jul 25;12:44. doi: 10.1186/s40793-017-0257-z. eCollection 2017.

10.

Tunable Control of an Escherichia coli Expression System for the Overproduction of Membrane Proteins by Titrated Expression of a Mutant lac Repressor.

Kim SK, Lee DH, Kim OC, Kim JF, Yoon SH.

ACS Synth Biol. 2017 Sep 15;6(9):1766-1773. doi: 10.1021/acssynbio.7b00102. Epub 2017 May 31.

PMID:
28524655
11.

Genome characteristics of the proteorhodopsin-containing marine flavobacterium Polaribacter dokdonensis DSW-5.

Yoon K, Song JY, Kwak MJ, Kwon SK, Kim JF.

J Microbiol. 2017 Jul;55(7):561-567. doi: 10.1007/s12275-017-6427-2. Epub 2017 Apr 22.

PMID:
28432541
12.

Genomic and transcriptomic landscape of Escherichia coli BL21(DE3).

Kim S, Jeong H, Kim EY, Kim JF, Lee SY, Yoon SH.

Nucleic Acids Res. 2017 May 19;45(9):5285-5293. doi: 10.1093/nar/gkx228.

13.

Exploring and Exploiting the Effect of Solvent Treatment in Membrane Separations.

Razali M, Didaskalou C, Kim JF, Babaei M, Drioli E, Lee YM, Szekely G.

ACS Appl Mater Interfaces. 2017 Mar 29;9(12):11279-11289. doi: 10.1021/acsami.7b01879. Epub 2017 Mar 20.

PMID:
28276673
14.

Gut-Specific Delivery of T-Helper 17 Cells Reduces Obesity and Insulin Resistance in Mice.

Hong CP, Park A, Yang BG, Yun CH, Kwak MJ, Lee GW, Kim JH, Jang MS, Lee EJ, Jeun EJ, You G, Kim KS, Choi Y, Park JH, Hwang D, Im SH, Kim JF, Kim YK, Seoh JY, Surh CD, Kim YM, Jang MH.

Gastroenterology. 2017 Jun;152(8):1998-2010. doi: 10.1053/j.gastro.2017.02.016. Epub 2017 Feb 27.

PMID:
28246016
15.

Investigating the accuracy, risk impact, and cost-effectiveness of component-resolved diagnostic test for food allergy: a systematic review protocol.

Kim JF, Nwaru BI, McCleary N, Stoddart A, Sheikh A.

NPJ Prim Care Respir Med. 2017 Feb 9;27(1):10. doi: 10.1038/s41533-017-0015-0. No abstract available.

16.

Long-Term Exposure to Imatinib Mesylate Downregulates Hippo Pathway and Activates YAP in a Model of Chronic Myelogenous Leukemia.

Chorzalska A, Kim JF, Roder K, Tepper A, Ahsan N, Rao RSP, Olszewski AJ, Yu X, Terentyev D, Morgan J, Treaba DO, Zhao TC, Liang O, Gruppuso PA, Dubielecka PM.

Stem Cells Dev. 2017 May 1;26(9):656-677. doi: 10.1089/scd.2016.0262. Epub 2017 Feb 27.

17.

Genome Information of Maribacter dokdonensis DSW-8 and Comparative Analysis with Other Maribacter Genomes.

Kwak MJ, Lee J, Kwon SK, Kim JF.

J Microbiol Biotechnol. 2017 Mar 28;27(3):591-597. doi: 10.4014/jmb.1608.08044.

18.

Genome Sequence of Porphyrobacter dokdonensis DSW-74T, Isolated from Seawater off Dokdo in the East Sea (Sea of Korea).

Song JY, Hong J, Kwak MJ, Kwon SK, Kim JF.

Genome Announc. 2016 Sep 1;4(5). pii: e00903-16. doi: 10.1128/genomeA.00903-16.

19.

Crystal structure and functional characterization of a light-driven chloride pump having an NTQ motif.

Kim K, Kwon SK, Jun SH, Cha JS, Kim H, Lee W, Kim JF, Cho HS.

Nat Commun. 2016 Aug 24;7:12677. doi: 10.1038/ncomms12677.

20.

Evolutionary architecture of the infant-adapted group of Bifidobacterium species associated with the probiotic function.

Kwak MJ, Kwon SK, Yoon JK, Song JY, Seo JG, Chung MJ, Kim JF.

Syst Appl Microbiol. 2016 Oct;39(7):429-439. doi: 10.1016/j.syapm.2016.07.004. Epub 2016 Jul 29.

PMID:
27524178
21.
22.

Does the intestinal microbial community of Korean Crohn's disease patients differ from that of western patients?

Eun CS, Kwak MJ, Han DS, Lee AR, Park DI, Yang SK, Kim YS, Kim JF.

BMC Gastroenterol. 2016 Feb 29;16:28. doi: 10.1186/s12876-016-0437-0.

23.

Genome sequence of Escherichia coli NCCP15653, a group D strain isolated from a diarrhea patient.

Kwak MJ, Kim MS, Kwon SK, Cho SH, Kim JF.

Gut Pathog. 2016 Feb 23;8:7. doi: 10.1186/s13099-016-0084-6. eCollection 2016.

24.

Complete genome sequence of Streptomyces venezuelae ATCC 15439, a promising cell factory for production of secondary metabolites.

Song JY, Yoo YJ, Lim SK, Cha SH, Kim JE, Roe JH, Kim JF, Yoon YJ.

J Biotechnol. 2016 Feb 10;219:57-8. doi: 10.1016/j.jbiotec.2015.12.028. Epub 2015 Dec 21.

PMID:
26718561
25.

Genome sequence of Lysobacter dokdonensis DS-58(T), a gliding bacterium isolated from soil in Dokdo, Korea.

Kwak MJ, Kwon SK, Yoon JH, Kim JF.

Stand Genomic Sci. 2015 Dec 9;10:123. doi: 10.1186/s40793-015-0116-8. eCollection 2015.

26.

Genome sequence of the marine flavobacterium Croceitalea dokdonensis DOKDO 023 that contains proton- and sodium-pumping rhodopsins.

Kwon SK, Lee HG, Kwak MJ, Kim JF.

Mar Genomics. 2016 Apr;26:1-3. doi: 10.1016/j.margen.2015.11.011. Epub 2015 Nov 26.

PMID:
26631417
28.

Complete genome sequence of the probiotic bacterium Bifidobacterium breve KCTC 12201BP isolated from a healthy infant.

Kwak MJ, Yoon JK, Kwon SK, Chung MJ, Seo JG, Kim JF.

J Biotechnol. 2015 Nov 20;214:156-7. doi: 10.1016/j.jbiotec.2015.09.035. Epub 2015 Oct 8.

PMID:
26439429
29.

Complete genome sequence of Bifidobacterium longum KCTC 12200BP, a probiotic strain promoting the intestinal health.

Kwon SK, Kwak MJ, Seo JG, Chung MJ, Kim JF.

J Biotechnol. 2015 Nov 20;214:169-70. doi: 10.1016/j.jbiotec.2015.09.039. Epub 2015 Oct 8.

PMID:
26439427
30.

Microbial and biochemical basis of a Fusarium wilt-suppressive soil.

Cha JY, Han S, Hong HJ, Cho H, Kim D, Kwon Y, Kwon SK, Crüsemann M, Bok Lee Y, Kim JF, Giaever G, Nislow C, Moore BS, Thomashow LS, Weller DM, Kwak YS.

ISME J. 2016 Jan;10(1):119-29. doi: 10.1038/ismej.2015.95. Epub 2015 Jun 9.

31.

Liquid-Phase Synthesis of 2'-Methyl-RNA on a Homostar Support through Organic-Solvent Nanofiltration.

Gaffney PR, Kim JF, Valtcheva IB, Williams GD, Anson MS, Buswell AM, Livingston AG.

Chemistry. 2015 Jun 22;21(26):9535-43. doi: 10.1002/chem.201501001. Epub 2015 May 26.

32.

Genome sequences of the Shiga-like toxin-producing Escherichia coli NCCP15655 and NCCP15656.

Kwak MJ, Kwon SK, Cho SH, Kim JF.

Gut Pathog. 2015 May 12;7:13. doi: 10.1186/s13099-015-0060-6. eCollection 2015.

33.

Growth retardation of Escherichia coli by artificial increase of intracellular ATP.

Na YA, Lee JY, Bang WJ, Lee HJ, Choi SI, Kwon SK, Jung KH, Kim JF, Kim P.

J Ind Microbiol Biotechnol. 2015 Jun;42(6):915-24. doi: 10.1007/s10295-015-1609-6. Epub 2015 Apr 3.

PMID:
25838237
34.

PAIDB v2.0: exploration and analysis of pathogenicity and resistance islands.

Yoon SH, Park YK, Kim JF.

Nucleic Acids Res. 2015 Jan;43(Database issue):D624-30. doi: 10.1093/nar/gku985. Epub 2014 Oct 21.

35.

Genome information of Methylobacterium oryzae, a plant-probiotic methylotroph in the phyllosphere.

Kwak MJ, Jeong H, Madhaiyan M, Lee Y, Sa TM, Oh TK, Kim JF.

PLoS One. 2014 Sep 11;9(9):e106704. doi: 10.1371/journal.pone.0106704. eCollection 2014.

36.

Sulfitobacter geojensis sp. nov., Sulfitobacter noctilucae sp. nov., and Sulfitobacter noctilucicola sp. nov., isolated from coastal seawater.

Kwak MJ, Lee JS, Lee KC, Kim KK, Eom MK, Kim BK, Kim JF.

Int J Syst Evol Microbiol. 2014 Nov;64(Pt 11):3760-7. doi: 10.1099/ijs.0.065961-0. Epub 2014 Aug 13.

PMID:
25122614
37.

Differences in gastric mucosal microbiota profiling in patients with chronic gastritis, intestinal metaplasia, and gastric cancer using pyrosequencing methods.

Eun CS, Kim BK, Han DS, Kim SY, Kim KM, Choi BY, Song KS, Kim YS, Kim JF.

Helicobacter. 2014 Dec;19(6):407-16. doi: 10.1111/hel.12145. Epub 2014 Jul 23.

PMID:
25052961
38.

An expansin from the marine bacterium Hahella chejuensis acts synergistically with xylanase and enhances xylan hydrolysis.

Lee HJ, Kim IJ, Kim JF, Choi IG, Kim KH.

Bioresour Technol. 2013 Dec;149:516-9. doi: 10.1016/j.biortech.2013.09.086. Epub 2013 Sep 29.

PMID:
24140897
39.

Isolation and characterization of a novel agar-degrading marine bacterium, Gayadomonas joobiniege gen, nov, sp. nov., from the Southern Sea, Korea.

Chi WJ, Park JS, Kwak MJ, Kim JF, Chang YK, Hong SK.

J Microbiol Biotechnol. 2013 Nov 28;23(11):1509-18.

40.

Charting microbial phenotypes in multiplex nanoliter batch bioreactors.

Dai J, Yoon SH, Sim HY, Yang YS, Oh TK, Kim JF, Hong JW.

Anal Chem. 2013 Jun 18;85(12):5892-9. doi: 10.1021/ac400648z. Epub 2013 May 24.

PMID:
23581968
41.

Genomic makeup of the marine flavobacterium Nonlabens (Donghaeana) dokdonensis and identification of a novel class of rhodopsins.

Kwon SK, Kim BK, Song JY, Kwak MJ, Lee CH, Yoon JH, Oh TK, Kim JF.

Genome Biol Evol. 2013;5(1):187-99. doi: 10.1093/gbe/evs134.

42.

Genome sequence of the agar-degrading marine bacterium Alteromonadaceae sp. strain G7.

Kwak MJ, Song JY, Kim BK, Chi WJ, Kwon SK, Choi S, Chang YK, Hong SK, Kim JF.

J Bacteriol. 2012 Dec;194(24):6961-2. doi: 10.1128/JB.01931-12.

43.

Genome sequence of the thermotolerant yeast Kluyveromyces marxianus var. marxianus KCTC 17555.

Jeong H, Lee DH, Kim SH, Kim HJ, Lee K, Song JY, Kim BK, Sung BH, Park JC, Sohn JH, Koo HM, Kim JF.

Eukaryot Cell. 2012 Dec;11(12):1584-5. doi: 10.1128/EC.00260-12.

44.

Draft genome sequence of the antifungal-producing plant-benefiting bacterium Burkholderia pyrrocinia CH-67.

Song JY, Kwak MJ, Lee KY, Kong HG, Kim BK, Kwon SK, Lee SW, Kim JF.

J Bacteriol. 2012 Dec;194(23):6649-50. doi: 10.1128/JB.01779-12.

45.

Complete genome sequence of the probiotic bacterium Bifidobacterium bifidum strain BGN4.

Yu DS, Jeong H, Lee DH, Kwon SK, Song JY, Kim BK, Park MS, Ji GE, Oh TK, Kim JF.

J Bacteriol. 2012 Sep;194(17):4757-8. doi: 10.1128/JB.00988-12.

46.

Complete genome sequence of the endophytic bacterium Burkholderia sp. strain KJ006.

Kwak MJ, Song JY, Kim SY, Jeong H, Kang SG, Kim BK, Kwon SK, Lee CH, Yu DS, Park SH, Kim JF.

J Bacteriol. 2012 Aug;194(16):4432-3. doi: 10.1128/JB.00821-12.

47.

Genome sequence of an oligohaline hyperthermophilic archaeon, Thermococcus zilligii AN1, isolated from a terrestrial geothermal freshwater spring.

Kim BK, Lee SH, Kim SY, Jeong H, Kwon SK, Lee CH, Song JY, Yu DS, Kang SG, Kim JF.

J Bacteriol. 2012 Jul;194(14):3765-6. doi: 10.1128/JB.00655-12.

48.

Genome sequence of the plant growth-promoting rhizobacterium Bacillus sp. strain JS.

Song JY, Kim HA, Kim JS, Kim SY, Jeong H, Kang SG, Kim BK, Kwon SK, Lee CH, Yu DS, Kim BS, Kim SH, Kwon SY, Kim JF.

J Bacteriol. 2012 Jul;194(14):3760-1. doi: 10.1128/JB.00676-12.

49.

Genome sequence of the leaf-colonizing Bacterium Bacillus sp. strain 5B6, isolated from a cherry tree.

Kim BK, Chung JH, Kim SY, Jeong H, Kang SG, Kwon SK, Lee CH, Song JY, Yu DS, Ryu CM, Kim JF.

J Bacteriol. 2012 Jul;194(14):3758-9. doi: 10.1128/JB.00682-12.

50.

Genome sequence of the Shiga toxin-producing Escherichia coli strain NCCP15657.

Kim BK, Song GC, Hong GH, Seong WK, Kim SY, Jeong H, Kang SG, Kwon SK, Lee CH, Song JY, Yu DS, Park MS, Cho SH, Kim JF.

J Bacteriol. 2012 Jul;194(14):3751-2. doi: 10.1128/JB.00654-12.

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