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Items: 1 to 50 of 538

1.

Role of Musa paradisiaca ascorbate peroxidase in the transformation of methyl phenyl sulfide to its sulfoxide.

Yadav KS, Yadav P, Sharma S, Khare SK.

Int J Biol Macromol. 2018 Nov 5. pii: S0141-8130(18)34475-1. doi: 10.1016/j.ijbiomac.2018.11.014. [Epub ahead of print]

PMID:
30408454
2.

18F-Fluorodeoxyglucose Positron Emission Tomography/Computed Tomography Features in Locally Advanced Breast Cancer and Their Correlation with Molecular Subtypes.

Khare S, Singh SS, Irrinki S, Sakaray Y, Mittal BR, Bal A, Singh G.

Indian J Nucl Med. 2018 Oct-Dec;33(4):290-294. doi: 10.4103/ijnm.IJNM_77_18.

3.

An Algorithm Using Botox Injections for Facial Scar Improvement in Fitzpatrick Type IV-VI Skin.

Shome D, Khare S, Kapoor R.

Plast Reconstr Surg Glob Open. 2018 Aug 8;6(8):e1888. doi: 10.1097/GOX.0000000000001888. eCollection 2018 Aug.

4.

Systematic Comparison of Amber and Rosetta Energy Functions for Protein Structure Evaluation.

Rubenstein AB, Blacklock K, Nguyen H, Case DA, Khare SD.

J Chem Theory Comput. 2018 Nov 13;14(11):6015-6025. doi: 10.1021/acs.jctc.8b00303. Epub 2018 Oct 12.

PMID:
30240210
5.

In vitro test systems to determine tetracycline residue binding to human feces.

Ahn Y, Jung JY, Veach BT, Khare S, Gokulan K, Piñeiro SA, Cerniglia CE.

Regul Toxicol Pharmacol. 2018 Nov;99:105-115. doi: 10.1016/j.yrtph.2018.09.013. Epub 2018 Sep 15.

PMID:
30227174
6.

Irreversible effects of trichloroethylene on the gut microbial community and gut-associated immune responses in autoimmune-prone mice.

Khare S, Gokulan K, Williams K, Bai S, Gilbert KM, Blossom SJ.

J Appl Toxicol. 2018 Sep 5. doi: 10.1002/jat.3708. [Epub ahead of print]

PMID:
30187502
7.

Current insight and futuristic vistas of microbial transglutaminase in nutraceutical industry.

Fatima SW, Khare SK.

Microbiol Res. 2018 Oct;215:7-14. doi: 10.1016/j.micres.2018.06.001. Epub 2018 Jun 4. Review.

PMID:
30172311
8.

Asparaginase conjugated magnetic nanoparticles used for reducing acrylamide formation in food model system.

Alam S, Ahmad R, Pranaw K, Mishra P, Khare SK.

Bioresour Technol. 2018 Dec;269:121-126. doi: 10.1016/j.biortech.2018.08.095. Epub 2018 Aug 22.

PMID:
30157443
9.

Exposure to Arsenite in CD-1 Mice during Juvenile and Adult Stages: Effects on Intestinal Microbiota and Gut-Associated Immune Status.

Gokulan K, Arnold MG, Jensen J, Vanlandingham M, Twaddle NC, Doerge DR, Cerniglia CE, Khare S.

MBio. 2018 Aug 14;9(4). pii: e01418-18. doi: 10.1128/mBio.01418-18.

10.

Prothrombotic state in HIV: A study on protein C, protein S, homocysteine and correlation with CD4 counts.

Khare S, Kushwaha R, Kumar A, Venkatesh V, Reddy HD, Jain M, Yusuf M, Singh US.

Indian J Med Microbiol. 2018 Apr-Jun;36(2):201-206. doi: 10.4103/ijmm.IJMM_15_414.

11.

Halophilic lipase does forms catalytically active aggregates: Evidence from Marinobacter sp. EMB5 lipase (LipEMB5).

Hemamalini R, Khare SK.

Int J Biol Macromol. 2018 Nov;119:172-179. doi: 10.1016/j.ijbiomac.2018.07.097. Epub 2018 Jul 17.

PMID:
30026099
12.

Isolation and purification of antibacterial compound from Streptomyces levis collected from soil sample of north India.

Singh V, Haque S, Khare S, Tiwari AK, Katiyar D, Banerjee B, Kumari K, Tripathi CKM.

PLoS One. 2018 Jul 10;13(7):e0200500. doi: 10.1371/journal.pone.0200500. eCollection 2018.

13.

C-terminal proline deletions in KCNC3 cause delayed channel inactivation and an adult-onset progressive SCA13 with spasticity.

Khare S, Galeano K, Zhang Y, Nick JA, Nick HS, Subramony SH, Sampson J, Kaczmarek LK, Waters MF.

Cerebellum. 2018 Oct;17(5):692-697. doi: 10.1007/s12311-018-0950-5.

PMID:
29949095
14.

Responses of intestinal virome to silver nanoparticles: safety assessment by classical virology, whole-genome sequencing and bioinformatics approaches.

Gokulan K, Bekele AZ, Drake KL, Khare S.

Int J Nanomedicine. 2018 May 16;13:2857-2867. doi: 10.2147/IJN.S161379. eCollection 2018.

15.

Synthetic analogues of the parasitic worm product ES-62 reduce disease development in in vivo models of lung fibrosis.

Suckling CJ, Mukherjee S, Khalaf AI, Narayan A, Scott FJ, Khare S, Dhakshinamoorthy S, Harnett MM, Harnett W.

Acta Trop. 2018 Sep;185:212-218. doi: 10.1016/j.actatropica.2018.05.015. Epub 2018 May 23.

PMID:
29802846
16.

Rosa damascena restrains Plasmodium falciparum progression in vitro and impedes malaria pathogenesis in murine model.

Khare S, Gupta M, Cheema HS, Maurya AK, Rout P, Darokar MP, Pal A.

Biomed Pharmacother. 2018 Jan;97:1654-1662. doi: 10.1016/j.biopha.2017.11.130. Epub 2017 Dec 8.

PMID:
29793328
17.

Multi-Pronged Interactions Underlie Inhibition of α-Synuclein Aggregation by β-Synuclein.

Williams JK, Yang X, Atieh TB, Olson MP, Khare SD, Baum J.

J Mol Biol. 2018 Aug 3;430(16):2360-2371. doi: 10.1016/j.jmb.2018.05.024. Epub 2018 May 18.

PMID:
29782835
18.

Arginase 2 Suppresses Renal Carcinoma Progression via Biosynthetic Cofactor Pyridoxal Phosphate Depletion and Increased Polyamine Toxicity.

Ochocki JD, Khare S, Hess M, Ackerman D, Qiu B, Daisak JI, Worth AJ, Lin N, Lee P, Xie H, Li B, Wubbenhorst B, Maguire TG, Nathanson KL, Alwine JC, Blair IA, Nissim I, Keith B, Simon MC.

Cell Metab. 2018 Jun 5;27(6):1263-1280.e6. doi: 10.1016/j.cmet.2018.04.009. Epub 2018 May 10.

PMID:
29754953
19.

Rapid Mapping of Protein Binding Sites and Conformational Epitopes by Coupling Yeast Surface Display to Chemical Labeling and Deep Sequencing.

Najar TA, Khare S, Varadarajan R.

Methods Mol Biol. 2018;1785:77-88. doi: 10.1007/978-1-4939-7841-0_6.

PMID:
29714013
20.

Opposing Actions of Developmental Trichloroethylene and High-Fat Diet Coexposure on Markers of Lipogenesis and Inflammation in Autoimmune-Prone Mice.

Blossom SJ, Fernandes L, Bai S, Khare S, Gokulan K, Yuan Y, Dewall M, Simmen FA, Gilbert KM.

Toxicol Sci. 2018 Jul 1;164(1):313-327. doi: 10.1093/toxsci/kfy091.

PMID:
29669109
21.

PR Toxin - Biosynthesis, Genetic Regulation, Toxicological Potential, Prevention and Control Measures: Overview and Challenges.

Dubey MK, Aamir M, Kaushik MS, Khare S, Meena M, Singh S, Upadhyay RS.

Front Pharmacol. 2018 Mar 29;9:288. doi: 10.3389/fphar.2018.00288. eCollection 2018. Review.

22.

Harnessing the bio-mineralization ability of urease producing Serratia marcescens and Enterobacter cloacae EMB19 for remediation of heavy metal cadmium (II).

Bhattacharya A, Naik SN, Khare SK.

J Environ Manage. 2018 Jun 1;215:143-152. doi: 10.1016/j.jenvman.2018.03.055. Epub 2018 Mar 20.

PMID:
29567554
23.

Structure and Inhibitor Specificity of L,D-Transpeptidase (LdtMt2) from Mycobacterium tuberculosis and Antibiotic Resistance: Calcium Binding Promotes Dimer Formation.

Gokulan K, Khare S, Cerniglia CE, Foley SL, Varughese KI.

AAPS J. 2018 Mar 9;20(2):44. doi: 10.1208/s12248-018-0193-x.

PMID:
29524047
24.

Bioprospecting microbes for single-cell oil production from starchy wastes.

Chaturvedi S, Kumari A, Nain L, Khare SK.

Prep Biochem Biotechnol. 2018 Mar 16;48(3):296-302. doi: 10.1080/10826068.2018.1431783. Epub 2018 Mar 5.

PMID:
29424627
25.

Computational assessment of thioether isosteres.

Barrows RD, Blacklock KM, Rablen PR, Khare SD, Knapp S.

J Mol Graph Model. 2018 Mar;80:282-292. doi: 10.1016/j.jmgm.2018.01.018. Epub 2018 Feb 1.

PMID:
29414047
26.

Cholesterol-oxidase-magnetic nanobioconjugates for the production of 4-cholesten-3-one and 4-cholesten-3, 7-dione.

Ghosh S, Ahmad R, Gautam VK, Khare SK.

Bioresour Technol. 2018 Apr;254:91-96. doi: 10.1016/j.biortech.2018.01.030. Epub 2018 Jan 9.

PMID:
29413944
27.

Immobilization of Aspergillus niger cellulase on multiwall carbon nanotubes for cellulose hydrolysis.

Ahmad R, Khare SK.

Bioresour Technol. 2018 Mar;252:72-75. doi: 10.1016/j.biortech.2017.12.082. Epub 2017 Dec 27.

PMID:
29306133
28.

An in vitro study to assess the impact of tetracycline on the human intestinal microbiome.

Jung JY, Ahn Y, Khare S, Gokulan K, Piñeiro SA, Cerniglia CE.

Anaerobe. 2018 Feb;49:85-94. doi: 10.1016/j.anaerobe.2017.12.011. Epub 2017 Dec 30.

PMID:
29294359
29.

One-pot bioprocess for lactic acid production from lignocellulosic agro-wastes by using ionic liquid stable Lactobacillus brevis.

Grewal J, Khare SK.

Bioresour Technol. 2018 Mar;251:268-273. doi: 10.1016/j.biortech.2017.12.056. Epub 2017 Dec 20.

PMID:
29288954
30.

Primary Antiphospholipid Antibody Syndrome Presenting as Unilateral Adrenal Hemorrhage.

Khare S, Patel H, Sutaria G, Sharma R.

Indian J Endocrinol Metab. 2017 Nov-Dec;21(6):932-933. doi: 10.4103/ijem.IJEM_474_17. No abstract available.

31.

A new method for removal of eyelid margin molluscum.

Khare S, Dubey S, Nagar R.

J Am Acad Dermatol. 2018 Jun;78(6):e151-e152. doi: 10.1016/j.jaad.2017.12.036. Epub 2017 Dec 20. No abstract available.

PMID:
29274346
32.

Computational Design of a Photocontrolled Cytosine Deaminase.

Blacklock KM, Yachnin BJ, Woolley GA, Khare SD.

J Am Chem Soc. 2018 Jan 10;140(1):14-17. doi: 10.1021/jacs.7b08709. Epub 2017 Dec 28.

PMID:
29251923
33.

A computational method for the design of nested proteins by loop-directed domain insertion.

Blacklock KM, Yang L, Mulligan VK, Khare SD.

Proteins. 2018 Mar;86(3):354-369. doi: 10.1002/prot.25445. Epub 2018 Jan 24.

PMID:
29250820
34.

New Delhi metallo-β-lactamase - type carbapenemases producing Escherichia coli isolates from hospitalized patients: A pilot study.

Grover SS, Doda A, Gupta N, Gandhoke I, Batra J, Hans C, Khare S.

Indian J Med Res. 2017 Jul;146(1):105-110. doi: 10.4103/ijmr.IJMR_594_15.

35.

Enzyme stabilization via computationally guided protein stapling.

Moore EJ, Zorine D, Hansen WA, Khare SD, Fasan R.

Proc Natl Acad Sci U S A. 2017 Nov 21;114(47):12472-12477. doi: 10.1073/pnas.1708907114. Epub 2017 Nov 6.

36.

Epidemiological Profile of Acute Viral Encephalitis.

Kumar R, Kumar P, Singh MK, Agarwal D, Jamir B, Khare S, Narayan S.

Indian J Pediatr. 2018 May;85(5):358-363. doi: 10.1007/s12098-017-2481-3. Epub 2017 Oct 27.

PMID:
29076102
37.

Potential of ionic liquids for inhibiting the growth and β-lactamase production by Bacillus cereus EMB20.

Sadaf A, Kumari A, Khare SK.

Int J Biol Macromol. 2018 Feb;107(Pt B):1915-1921. doi: 10.1016/j.ijbiomac.2017.10.053. Epub 2017 Oct 13.

PMID:
29030198
38.

Structures of the peptide-modifying radical SAM enzyme SuiB elucidate the basis of substrate recognition.

Davis KM, Schramma KR, Hansen WA, Bacik JP, Khare SD, Seyedsayamdost MR, Ando N.

Proc Natl Acad Sci U S A. 2017 Sep 26;114(39):10420-10425. doi: 10.1073/pnas.1703663114. Epub 2017 Sep 11.

39.

Effects of residual levels of tetracycline on the barrier functions of human intestinal epithelial cells.

Gokulan K, Cerniglia CE, Thomas C, Pineiro SA, Khare S.

Food Chem Toxicol. 2017 Nov;109(Pt 1):253-263. doi: 10.1016/j.fct.2017.09.004. Epub 2017 Sep 4.

PMID:
28882639
40.

Strengthening laboratory surveillance of antimicrobial resistance in South East Asia.

Shah AS, Karunaratne K, Shakya G, Barreto I, Khare S, Paveenkittiporn W, Wangchuk S, Tin HH, Muhsin MA, Aung L, Bhatia R, Srivastava R, Maryandi DA.

BMJ. 2017 Sep 5;358:j3474. doi: 10.1136/bmj.j3474. No abstract available.

41.

Seroprevalence of transplacentally acquired measles antibodies in HIV-exposed versus HIV-unexposed infants at six months of age.

Jain S, Seth A, Khare S, Chandra J.

Indian J Med Res. 2017 Apr;145(4):536-542. doi: 10.4103/ijmr.IJMR_44_16.

42.

Computation-Guided Design of a Stimulus-Responsive Multienzyme Supramolecular Assembly.

Yang L, Dolan EM, Tan SK, Lin T, Sontag ED, Khare SD.

Chembiochem. 2017 Oct 18;18(20):2000-2006. doi: 10.1002/cbic.201700425. Epub 2017 Sep 1.

PMID:
28799209
43.

Systems Biology Analysis of Temporal In vivo Brucella melitensis and Bovine Transcriptomes Predicts host:Pathogen Protein-Protein Interactions.

Rossetti CA, Drake KL, Lawhon SD, Nunes JS, Gull T, Khare S, Adams LG.

Front Microbiol. 2017 Jul 27;8:1275. doi: 10.3389/fmicb.2017.01275. eCollection 2017.

44.

Design and Evolution of a Macrocyclic Peptide Inhibitor of the Sonic Hedgehog/Patched Interaction.

Owens AE, de Paola I, Hansen WA, Liu YW, Khare SD, Fasan R.

J Am Chem Soc. 2017 Sep 13;139(36):12559-12568. doi: 10.1021/jacs.7b06087. Epub 2017 Aug 30.

45.

A pH-dependent switch promotes β-synuclein fibril formation via glutamate residues.

Moriarty GM, Olson MP, Atieh TB, Janowska MK, Khare SD, Baum J.

J Biol Chem. 2017 Sep 29;292(39):16368-16379. doi: 10.1074/jbc.M117.780528. Epub 2017 Jul 14.

46.

Structure and Functional Characterisation of a Distinctive β-Lactamase from an Environmental Strain EMB20 of Bacillus cereus.

Sadaf A, Sinha R, Khare SK.

Appl Biochem Biotechnol. 2018 Jan;184(1):197-211. doi: 10.1007/s12010-017-2539-8. Epub 2017 Jun 29.

PMID:
28664525
47.

MFPred: Rapid and accurate prediction of protein-peptide recognition multispecificity using self-consistent mean field theory.

Rubenstein AB, Pethe MA, Khare SD.

PLoS Comput Biol. 2017 Jun 26;13(6):e1005614. doi: 10.1371/journal.pcbi.1005614. eCollection 2017 Jun.

48.

The PYRIN domain-only protein POP2 inhibits inflammasome priming and activation.

Ratsimandresy RA, Chu LH, Khare S, de Almeida L, Gangopadhyay A, Indramohan M, Misharin AV, Greaves DR, Perlman H, Dorfleutner A, Stehlik C.

Nat Commun. 2017 Jun 5;8:15556. doi: 10.1038/ncomms15556.

49.

Biodegradation of 7-Ketocholesterol by Rhodococcus erythropolis MTCC 3951: Process optimization and enzymatic insights.

Ghosh S, Khare SK.

Chem Phys Lipids. 2017 Oct;207(Pt B):253-259. doi: 10.1016/j.chemphyslip.2017.05.008. Epub 2017 May 29.

PMID:
28571786
50.

Benchmarking a computational design method for the incorporation of metal ion-binding sites at symmetric protein interfaces.

Hansen WA, Khare SD.

Protein Sci. 2017 Aug;26(8):1584-1594. doi: 10.1002/pro.3194. Epub 2017 May 31.

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