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Items: 21

1.

A community-developed open-source computational ecosystem for big neuro data.

Vogelstein JT, Perlman E, Falk B, Baden A, Gray Roncal W, Chandrashekhar V, Collman F, Seshamani S, Patsolic JL, Lillaney K, Kazhdan M, Hider R Jr, Pryor D, Matelsky J, Gion T, Manavalan P, Wester B, Chevillet M, Trautman ET, Khairy K, Bridgeford E, Kleissas DM, Tward DJ, Crow AK, Hsueh B, Wright MA, Miller MI, Smith SJ, Vogelstein RJ, Deisseroth K, Burns R.

Nat Methods. 2018 Nov;15(11):846-847. doi: 10.1038/s41592-018-0181-1. No abstract available.

2.

A Complete Electron Microscopy Volume of the Brain of Adult Drosophila melanogaster.

Zheng Z, Lauritzen JS, Perlman E, Robinson CG, Nichols M, Milkie D, Torrens O, Price J, Fisher CB, Sharifi N, Calle-Schuler SA, Kmecova L, Ali IJ, Karsh B, Trautman ET, Bogovic JA, Hanslovsky P, Jefferis GSXE, Kazhdan M, Khairy K, Saalfeld S, Fetter RD, Bock DD.

Cell. 2018 Jul 26;174(3):730-743.e22. doi: 10.1016/j.cell.2018.06.019. Epub 2018 Jul 19.

3.

A Preferred Curvature-Based Continuum Mechanics Framework for Modeling Embryogenesis.

Khairy K, Lemon W, Amat F, Keller PJ.

Biophys J. 2018 Jan 23;114(2):267-277. doi: 10.1016/j.bpj.2017.11.015.

4.

Light sheet-based imaging and analysis of early embryogenesis in the fruit fly.

Khairy K, Lemon WC, Amat F, Keller PJ.

Methods Mol Biol. 2015;1189:79-97. doi: 10.1007/978-1-4939-1164-6_6.

PMID:
25245688
5.

MRI anatomy of anteriorly displaced anus: what obstructs defecation?

AbouZeid AA, Mohammad SA, Khairy KT.

Pediatr Radiol. 2014 Jul;44(7):831-8. doi: 10.1007/s00247-014-2897-0. Epub 2014 Apr 23.

PMID:
24756250
6.

Light sheet microscopy in cell biology.

Tomer R, Khairy K, Keller PJ.

Methods Mol Biol. 2013;931:123-37. doi: 10.1007/978-1-62703-056-4_7. Review.

PMID:
23027001
7.

Quantitative high-speed imaging of entire developing embryos with simultaneous multiview light-sheet microscopy.

Tomer R, Khairy K, Amat F, Keller PJ.

Nat Methods. 2012 Jun 3;9(7):755-63. doi: 10.1038/nmeth.2062.

PMID:
22660741
8.

Shedding light on the system: studying embryonic development with light sheet microscopy.

Tomer R, Khairy K, Keller PJ.

Curr Opin Genet Dev. 2011 Oct;21(5):558-65. doi: 10.1016/j.gde.2011.07.003. Epub 2011 Aug 19. Review.

PMID:
21862314
9.

Reconstructing embryonic development.

Khairy K, Keller PJ.

Genesis. 2011 Jul;49(7):488-513. doi: 10.1002/dvg.20698. Epub 2011 Jan 24. Review.

PMID:
21140407
10.

Shapes of Red Blood Cells: Comparison of 3D Confocal Images with the Bilayer-Couple Model.

Khairy K, Foo J, Howard J.

Cell Mol Bioeng. 2010 Sep 1;1(2-3):173-181.

11.

Membrane invaginations reveal cortical sites that pull on mitotic spindles in one-cell C. elegans embryos.

Redemann S, Pecreaux J, Goehring NW, Khairy K, Stelzer EH, Hyman AA, Howard J.

PLoS One. 2010 Aug 20;5(8):e12301. doi: 10.1371/journal.pone.0012301.

12.

Fast, high-contrast imaging of animal development with scanned light sheet-based structured-illumination microscopy.

Keller PJ, Schmidt AD, Santella A, Khairy K, Bao Z, Wittbrodt J, Stelzer EH.

Nat Methods. 2010 Aug;7(8):637-42. doi: 10.1038/nmeth.1476. Epub 2010 Jul 4.

13.

Detection of deformable objects in 3D images using Markov-Chain Monte Carlo and spherical harmonics.

Khairy K, Reynaud E, Stelzer E.

Med Image Comput Comput Assist Interv. 2008;11(Pt 2):1075-82.

PMID:
18982711
14.

Spherical harmonics-based parametric deconvolution of 3D surface images using bending energy minimization.

Khairy K, Howard J.

Med Image Anal. 2008 Apr;12(2):217-27. Epub 2007 Oct 30.

PMID:
18055248
15.

Erythrocyte membrane proteins in healthy Saudis and patients with hereditary spherocytosis and hereditary elliptocytosis.

Al Khairy KS, Al Zahrani K, Al-Saleh SS, Oluboyede OA.

Ann Saudi Med. 2003 May-Jul;23(3-4):152-7.

16.

Nonlinear-least-squares analysis of slow motional regime EPR spectra.

Khairy K, Budil D, Fajer P.

J Magn Reson. 2006 Nov;183(1):152-9. Epub 2006 Aug 24.

PMID:
16934507
17.

Calculating slow-motional electron paramagnetic resonance spectra from molecular dynamics using a diffusion operator approach.

Budil DE, Sale KL, Khairy KA, Fajer PG.

J Phys Chem A. 2006 Mar 16;110(10):3703-13.

PMID:
16526654
18.

Molecular-scale topographic cues induce the orientation and directional movement of fibroblasts on two-dimensional collagen surfaces.

Poole K, Khairy K, Friedrichs J, Franz C, Cisneros DA, Howard J, Mueller D.

J Mol Biol. 2005 Jun 3;349(2):380-6. Epub 2005 Apr 9.

PMID:
15890202
19.

Creating nanoscopic collagen matrices using atomic force microscopy.

Jiang F, Khairy K, Poole K, Howard J, Müller DJ.

Microsc Res Tech. 2004 Aug;64(5-6):435-40.

PMID:
15549696
20.

HIV-1 p24 antigen testing in blood banks: results from Saudi Arabia.

Alamawi S, Abutaleb A, Qasem L, Masoud S, Memish Z, Al Khairy K, Kheir O, Bernvil S, Hajeer AH.

Br J Biomed Sci. 2003;60(2):102-4.

PMID:
12866919
21.

Immunophenotyping of peripheral blood lymphocytes in Saudi men.

Al Qouzi A, Al Salamah A, Al Rasheed R, Al Musalam A, Al Khairy K, Kheir O, Al Ajaji S, Hajeer AH.

Clin Diagn Lab Immunol. 2002 Mar;9(2):279-81.

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