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Items: 41

1.

Viral and Bacterial Fecal Indicators in Untreated Wastewater Across the Contiguous United States Exhibit Geospatial Trends.

Korajkic A, McMinn B, Herrmann MP, Sivaganesan M, Kelty CA, Clinton P, Nash MS, Shanks OC.

Appl Environ Microbiol. 2020 Feb 14. pii: AEM.02967-19. doi: 10.1128/AEM.02967-19. [Epub ahead of print]

PMID:
32060019
2.

Evidence of Genetic Fecal Marker Interactions between Water Column and Periphyton in Artificial Streams.

Li X, Peed L, Sivaganesan M, Kelty CA, Nietch C, Shanks OC.

ACS Omega. 2018 Aug 29;3(8):10107-10113. doi: 10.1021/acsomega.8b01785. eCollection 2018 Aug 31.

3.

Large-scale implementation of standardized quantitative real-time PCR fecal source identification procedures in the Tillamook Bay Watershed.

Li X, Sivaganesan M, Kelty CA, Zimmer-Faust A, Clinton P, Reichman JR, Johnson Y, Matthews W, Bailey S, Shanks OC.

PLoS One. 2019 Jun 6;14(6):e0216827. doi: 10.1371/journal.pone.0216827. eCollection 2019.

4.

Incidence of somatic and F+ coliphage in Great Lake Basin recreational waters.

Wanjugi P, Sivaganesan M, Korajkic A, McMinn B, Kelty CA, Rhodes E, Cyterski M, Zepp R, Oshima K, Stachler E, Kinzelman J, Kurdas SR, Citriglia M, Hsu FC, Acrey B, Shanks OC.

Water Res. 2018 Sep 1;140:200-210. doi: 10.1016/j.watres.2018.04.055. Epub 2018 Apr 25.

PMID:
29715644
5.

A human fecal contamination score for ranking recreational sites using the HF183/BacR287 quantitative real-time PCR method.

Cao Y, Sivaganesan M, Kelty CA, Wang D, Boehm AB, Griffith JF, Weisberg SB, Shanks OC.

Water Res. 2018 Jan 1;128:148-156. doi: 10.1016/j.watres.2017.10.071. Epub 2017 Oct 31.

PMID:
29101858
6.

Integrated preservation and sample clean up procedures for studying water ingestion by recreational swimmers via urinary biomarker determination.

CantĂș R, Shoemaker JA, Kelty CA, Wymer LJ, Behymer TD, Dufour AP, Magnuson ML.

Anal Chim Acta. 2017 Aug 22;982:104-111. doi: 10.1016/j.aca.2017.06.012. Epub 2017 Jun 19.

7.

Differential decomposition of bacterial and viral fecal indicators in common human pollution types.

Wanjugi P, Sivaganesan M, Korajkic A, Kelty CA, McMinn B, Ulrich R, Harwood VJ, Shanks OC.

Water Res. 2016 Nov 15;105:591-601. doi: 10.1016/j.watres.2016.09.041. Epub 2016 Sep 21.

PMID:
27693971
8.

Data Acceptance Criteria for Standardized Human-Associated Fecal Source Identification Quantitative Real-Time PCR Methods.

Shanks OC, Kelty CA, Oshiro R, Haugland RA, Madi T, Brooks L, Field KG, Sivaganesan M.

Appl Environ Microbiol. 2016 Apr 18;82(9):2773-2782. doi: 10.1128/AEM.03661-15. Print 2016 May.

9.

Development of rapid canine fecal source identification PCR-based assays.

Green HC, White KM, Kelty CA, Shanks OC.

Environ Sci Technol. 2014 Oct 7;48(19):11453-61. doi: 10.1021/es502637b. Epub 2014 Sep 24.

PMID:
25203917
10.

Factors affecting the presence of human-associated and fecal indicator real-time quantitative PCR genetic markers in urban-impacted recreational beaches.

Molina M, Hunter S, Cyterski M, Peed LA, Kelty CA, Sivaganesan M, Mooney T, Prieto L, Shanks OC.

Water Res. 2014 Nov 1;64:196-208. doi: 10.1016/j.watres.2014.06.036. Epub 2014 Jul 9.

PMID:
25061692
11.

Improved HF183 quantitative real-time PCR assay for characterization of human fecal pollution in ambient surface water samples.

Green HC, Haugland RA, Varma M, Millen HT, Borchardt MA, Field KG, Walters WA, Knight R, Sivaganesan M, Kelty CA, Shanks OC.

Appl Environ Microbiol. 2014 May;80(10):3086-94. doi: 10.1128/AEM.04137-13. Epub 2014 Mar 7.

12.

Age-related shifts in the density and distribution of genetic marker water quality indicators in cow and calf feces.

Shanks OC, Kelty CA, Peed L, Sivaganesan M, Mooney T, Jenkins M.

Appl Environ Microbiol. 2014 Mar;80(5):1588-94. doi: 10.1128/AEM.03581-13. Epub 2013 Dec 20.

13.

Evaluation of the repeatability and reproducibility of a suite of qPCR-based microbial source tracking methods.

Ebentier DL, Hanley KT, Cao Y, Badgley BD, Boehm AB, Ervin JS, Goodwin KD, Gourmelon M, Griffith JF, Holden PA, Kelty CA, Lozach S, McGee C, Peed LA, Raith M, Ryu H, Sadowsky MJ, Scott EA, Santo Domingo J, Schriewer A, Sinigalliano CD, Shanks OC, Van De Werfhorst LC, Wang D, Wuertz S, Jay JA.

Water Res. 2013 Nov 15;47(18):6839-48. doi: 10.1016/j.watres.2013.01.060. Epub 2013 Jul 5.

PMID:
23911226
14.

Comparison of PCR and quantitative real-time PCR methods for the characterization of ruminant and cattle fecal pollution sources.

Raith MR, Kelty CA, Griffith JF, Schriewer A, Wuertz S, Mieszkin S, Gourmelon M, Reischer GH, Farnleitner AH, Ervin JS, Holden PA, Ebentier DL, Jay JA, Wang D, Boehm AB, Aw TG, Rose JB, Balleste E, Meijer WG, Sivaganesan M, Shanks OC.

Water Res. 2013 Nov 15;47(18):6921-8. doi: 10.1016/j.watres.2013.03.061. Epub 2013 Jul 5.

PMID:
23871256
15.

Characterization of fecal concentrations in human and other animal sources by physical, culture-based, and quantitative real-time PCR methods.

Ervin JS, Russell TL, Layton BA, Yamahara KM, Wang D, Sassoubre LM, Cao Y, Kelty CA, Sivaganesan M, Boehm AB, Holden PA, Weisberg SB, Shanks OC.

Water Res. 2013 Nov 15;47(18):6873-82. doi: 10.1016/j.watres.2013.02.060. Epub 2013 Jul 5.

PMID:
23871252
16.

Comparison of the microbial community structures of untreated wastewaters from different geographic locales.

Shanks OC, Newton RJ, Kelty CA, Huse SM, Sogin ML, McLellan SL.

Appl Environ Microbiol. 2013 May;79(9):2906-13. doi: 10.1128/AEM.03448-12. Epub 2013 Feb 22.

17.

Dramatic improvements in beach water quality following gull removal.

Converse RR, Kinzelman JL, Sams EA, Hudgens E, Dufour AP, Ryu H, Santo-Domingo JW, Kelty CA, Shanks OC, Siefring SD, Haugland RA, Wade TJ.

Environ Sci Technol. 2012 Sep 18;46(18):10206-13. doi: 10.1021/es302306b. Epub 2012 Sep 5.

PMID:
22913457
18.

Distribution of genetic marker concentrations for fecal indicator bacteria in sewage and animal feces.

Kelty CA, Varma M, Sivaganesan M, Haugland RA, Shanks OC.

Appl Environ Microbiol. 2012 Jun;78(12):4225-32. doi: 10.1128/AEM.07819-11. Epub 2012 Apr 13.

19.

Interlaboratory comparison of real-time PCR protocols for quantification of general fecal indicator bacteria.

Shanks OC, Sivaganesan M, Peed L, Kelty CA, Blackwood AD, Greene MR, Noble RT, Bushon RN, Stelzer EA, Kinzelman J, Anan'eva T, Sinigalliano C, Wanless D, Griffith J, Cao Y, Weisberg S, Harwood VJ, Staley C, Oshima KH, Varma M, Haugland RA.

Environ Sci Technol. 2012 Jan 17;46(2):945-53. doi: 10.1021/es2031455. Epub 2011 Dec 16. Erratum in: Environ Sci Technol. 2012 Feb 21;46(4):2478.

PMID:
22133009
20.

Combining land use information and small stream sampling with PCR-based methods for better characterization of diffuse sources of human fecal pollution.

Peed LA, Nietch CT, Kelty CA, Meckes M, Mooney T, Sivaganesan M, Shanks OC.

Environ Sci Technol. 2011 Jul 1;45(13):5652-9. doi: 10.1021/es2003167. Epub 2011 Jun 10.

PMID:
21662992
21.

Decay of bacterial pathogens, fecal indicators, and real-time quantitative PCR genetic markers in manure-amended soils.

Rogers SW, Donnelly M, Peed L, Kelty CA, Mondal S, Zhong Z, Shanks OC.

Appl Environ Microbiol. 2011 Jul;77(14):4839-48. doi: 10.1128/AEM.02427-10. Epub 2011 Jun 3.

22.

Community structures of fecal bacteria in cattle from different animal feeding operations.

Shanks OC, Kelty CA, Archibeque S, Jenkins M, Newton RJ, McLellan SL, Huse SM, Sogin ML.

Appl Environ Microbiol. 2011 May;77(9):2992-3001. doi: 10.1128/AEM.02988-10. Epub 2011 Mar 4.

23.

Performance of PCR-based assays targeting Bacteroidales genetic markers of human fecal pollution in sewage and fecal samples.

Shanks OC, White K, Kelty CA, Sivaganesan M, Blannon J, Meckes M, Varma M, Haugland RA.

Environ Sci Technol. 2010 Aug 15;44(16):6281-8. doi: 10.1021/es100311n.

PMID:
20704227
24.

Performance assessment PCR-based assays targeting bacteroidales genetic markers of bovine fecal pollution.

Shanks OC, White K, Kelty CA, Hayes S, Sivaganesan M, Jenkins M, Varma M, Haugland RA.

Appl Environ Microbiol. 2010 Mar;76(5):1359-66. doi: 10.1128/AEM.02033-09. Epub 2010 Jan 8.

25.

Quantitative PCR for genetic markers of human fecal pollution.

Shanks OC, Kelty CA, Sivaganesan M, Varma M, Haugland RA.

Appl Environ Microbiol. 2009 Sep;75(17):5507-13. doi: 10.1128/AEM.00305-09. Epub 2009 Jul 10.

26.
27.

Identification of bacterial DNA markers for the detection of human fecal pollution in water.

Shanks OC, Domingo JW, Lu J, Kelty CA, Graham JE.

Appl Environ Microbiol. 2007 Apr;73(8):2416-22. Epub 2007 Jan 5.

28.

Competitive metagenomic DNA hybridization identifies host-specific microbial genetic markers in cow fecal samples.

Shanks OC, Santo Domingo JW, Lamendella R, Kelty CA, Graham JE.

Appl Environ Microbiol. 2006 Jun;72(6):4054-60.

29.

Phylogenetic diversity of drinking water bacteria in a distribution system simulator.

Williams MM, Domingo JW, Meckes MC, Kelty CA, Rochon HS.

J Appl Microbiol. 2004;96(5):954-64.

30.

Effect of UV irradiation on organic matter extracted from treated Ohio River water studied through the use of electrospray mass spectrometry.

Magnuson ML, Kelty CA, Sharpless CM, Linden KG, Fromme W, Metz DH, Kashinkunti R.

Environ Sci Technol. 2002 Dec 1;36(23):5252-60.

PMID:
12528657
31.
32.

Examples of the role of analytical chemistry in environmental risk management research.

Magnuson ML, Kelty CA, Urbansky ET, Owens JH, Kelty KC, Speth TF.

J Environ Monit. 2002 Feb;4(1):102-8. Review.

PMID:
11871689
34.

Stable association complex electrospray mass spectrometry for the determination of cyanuric acid.

Magnuson ML, Kelty CA, CantĂș R.

J Am Soc Mass Spectrom. 2001 Oct;12(10):1085-91.

35.
36.

Perchlorate levels in samples of sodium nitrate fertilizer derived from Chilean caliche.

Urbansky ET, Brown SK, Magnuson ML, Kelty CA.

Environ Pollut. 2001;112(3):299-302.

PMID:
11291435
37.
38.

Perchlorate uptake by salt cedar (Tamarix ramosissima) in the Las Vegas wash riparian ecosystem.

Urbansky ET, Magnuson ML, Kelty CA, Brown SK.

Sci Total Environ. 2000 Jul 10;256(2-3):227-32.

PMID:
10902849
40.

Determination of interfering triazine degradation products by gas chromatography-ion trap mass spectrometry.

Magnuson ML, Speth TF, Kelty CA.

J Chromatogr A. 2000 Jan 28;868(1):115-9.

PMID:
10677085
41.

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