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Firefighter occupation is associated with increased risk for laryngeal and hypopharyngeal squamous cell carcinoma among men from the Greater Boston area.

Langevin SM, Eliot M, Butler RA, McClean M, Kelsey KT.

Occup Environ Med. 2020 Feb 27. pii: oemed-2019-106271. doi: 10.1136/oemed-2019-106271. [Epub ahead of print]


DNA methylation aging clocks: challenges and recommendations.

Bell CG, Lowe R, Adams PD, Baccarelli AA, Beck S, Bell JT, Christensen BC, Gladyshev VN, Heijmans BT, Horvath S, Ideker T, Issa JJ, Kelsey KT, Marioni RE, Reik W, Relton CL, Schalkwyk LC, Teschendorff AE, Wagner W, Zhang K, Rakyan VK.

Genome Biol. 2019 Nov 25;20(1):249. doi: 10.1186/s13059-019-1824-y. Review.


A Bayesian framework for identifying consistent patterns of microbial abundance between body sites.

Meier R, Thompson JA, Chung M, Zhao N, Kelsey KT, Michaud DS, Koestler DC.

Stat Appl Genet Mol Biol. 2019 Nov 8;18(6). pii: /j/sagmb.2019.18.issue-6/sagmb-2019-0027/sagmb-2019-0027.xml. doi: 10.1515/sagmb-2019-0027.


Serum dioxin and DNA methylation in the sperm of operation ranch hand veterans exposed to Agent Orange.

Kelsey KT, Rytel M, Dere E, Butler R, Eliot M, Huse SM, Houseman EA, Koestler DC, Boekelheide K.

Environ Health. 2019 Oct 29;18(1):91. doi: 10.1186/s12940-019-0533-z.


Systematic evaluation and validation of reference and library selection methods for deconvolution of cord blood DNA methylation data.

Gervin K, Salas LA, Bakulski KM, van Zelm MC, Koestler DC, Wiencke JK, Duijts L, Moll HA, Kelsey KT, Kobor MS, Lyle R, Christensen BC, Felix JF, Jones MJ.

Clin Epigenetics. 2019 Aug 27;11(1):125. doi: 10.1186/s13148-019-0717-y.


Residential radon, genetic polymorphisms in DNA damage and repair-related.

Lorenzo-González M, Ruano-Ravina A, Torres-Durán M, Kelsey KT, Provencio M, Parente-Lamelas I, Leiro-Fernández V, Vidal-García I, Castro-Añón O, Martínez C, Golpe-Gómez A, Torres-Español M, Abal-Arca J, Montero-Martínez C, Fernández-Villar A, Barros-Dios JM.

Lung Cancer. 2019 Sep;135:10-15. doi: 10.1016/j.lungcan.2019.07.003. Epub 2019 Jul 4.


Leveraging cell-specific differentially methylated regions to identify leukocyte infiltration in adipose tissue.

Chu SH, Kelsey KT, Koestler DC, Loucks EB, Huang YT.

Genet Epidemiol. 2019 Dec;43(8):1018-1029. doi: 10.1002/gepi.22252. Epub 2019 Aug 21.


Chrysotile fibers in tissue adjacent to laryngeal squamous cell carcinoma in cases with a history of occupational asbestos exposure.

Wronkiewicz SK, Roggli VL, Hinrichs BH, Kendler A, Butler RA, Christensen BC, Marsit CJ, Nelson HH, McClean MD, Kelsey KT, Langevin SM.

Mod Pathol. 2020 Feb;33(2):228-234. doi: 10.1038/s41379-019-0332-7. Epub 2019 Aug 5.


Absence of an embryonic stem cell DNA methylation signature in human cancer.

Zhang Z, Wiencke JK, Koestler DC, Salas LA, Christensen BC, Kelsey KT.

BMC Cancer. 2019 Jul 19;19(1):711. doi: 10.1186/s12885-019-5932-6.


Differential DNA methylation in blood as a mediator of the association between cigarette smoking and bladder cancer risk among postmenopausal women.

Jordahl KM, Phipps AI, Randolph TW, Tindle HA, Liu S, Tinker LF, Kelsey KT, White E, Bhatti P.

Epigenetics. 2019 Nov;14(11):1065-1073. doi: 10.1080/15592294.2019.1631112. Epub 2019 Jun 23.


Comprehensive mapping of the methylation landscape of 16 CpG-dense regions in oral and pharyngeal squamous cell carcinoma.

Langevin SM, Kuhnell D, Niu L, Biesiada J, Leung YK, Deka R, Chen A, Medvedovic M, Kelsey KT, Kasper S, Zhang X.

Epigenomics. 2019 Jul;11(9):987-1002. doi: 10.2217/epi-2018-0172. Epub 2019 Jun 19.


Neonatal Adipocytokines and Longitudinal Patterns of Childhood Growth.

Buck CO, Eliot MN, Kelsey KT, Chen A, Kalkwarf H, Lanphear BP, Braun JM.

Obesity (Silver Spring). 2019 Aug;27(8):1323-1330. doi: 10.1002/oby.22519. Epub 2019 Jun 14.


Lung cancer and residential radon in never-smokers: A pooling study in the Northwest of Spain.

Lorenzo-González M, Ruano-Ravina A, Torres-Durán M, Kelsey KT, Provencio M, Parente-Lamelas I, Leiro-Fernández V, Vidal-García I, Castro-Añón O, Martínez C, Golpe-Gómez A, Zapata-Cachafeiro M, Piñeiro-Lamas M, Pérez-Ríos M, Abal-Arca J, Montero-Martínez C, Fernández-Villar A, Barros-Dios JM.

Environ Res. 2019 May;172:713-718. doi: 10.1016/j.envres.2019.03.011. Epub 2019 Mar 6.


The Microbiomes of Pancreatic and Duodenum Tissue Overlap and Are Highly Subject Specific but Differ between Pancreatic Cancer and Noncancer Subjects.

Del Castillo E, Meier R, Chung M, Koestler DC, Chen T, Paster BJ, Charpentier KP, Kelsey KT, Izard J, Michaud DS.

Cancer Epidemiol Biomarkers Prev. 2019 Feb;28(2):370-383. doi: 10.1158/1055-9965.EPI-18-0542. Epub 2018 Oct 29.


Smoking induces coordinated DNA methylation and gene expression changes in adipose tissue with consequences for metabolic health.

Tsai PC, Glastonbury CA, Eliot MN, Bollepalli S, Yet I, Castillo-Fernandez JE, Carnero-Montoro E, Hardiman T, Martin TC, Vickers A, Mangino M, Ward K, Pietiläinen KH, Deloukas P, Spector TD, Viñuela A, Loucks EB, Ollikainen M, Kelsey KT, Small KS, Bell JT.

Clin Epigenetics. 2018 Oct 20;10(1):126. doi: 10.1186/s13148-018-0558-0.


Early life disadvantage and adult adiposity: tests of sensitive periods during childhood and behavioural mediation in adulthood.

Gilman SE, Huang YT, Jimenez MP, Agha G, Chu SH, Eaton CB, Goldstein RB, Kelsey KT, Buka SL, Loucks EB.

Int J Epidemiol. 2019 Feb 1;48(1):98-107. doi: 10.1093/ije/dyy199.


Prenatal Exposure to Perfluoroalkyl Substances: Infant Birth Weight and Early Life Growth.

Shoaff J, Papandonatos GD, Calafat AM, Chen A, Lanphear BP, Ehrlich S, Kelsey KT, Braun JM.

Environ Epidemiol. 2018 Jun;2(2). pii: e010. doi: 10.1097/EE9.0000000000000010.


Variation in DNA methylation of human blood over a 1-year period using the Illumina MethylationEPIC array.

Zaimi I, Pei D, Koestler DC, Marsit CJ, De Vivo I, Tworoger SS, Shields AE, Kelsey KT, Michaud DS.

Epigenetics. 2018;13(10-11):1056-1071. doi: 10.1080/15592294.2018.1530008. Epub 2018 Oct 21.


Prenatal exposure to perfluoroalkyl substances and adipocytokines: the HOME Study.

Buck CO, Eliot MN, Kelsey KT, Calafat AM, Chen A, Ehrlich S, Lanphear BP, Braun JM.

Pediatr Res. 2018 Dec;84(6):854-860. doi: 10.1038/s41390-018-0170-1. Epub 2018 Sep 13.


DNA methylation derived systemic inflammation indices are associated with head and neck cancer development and survival.

Ambatipudi S, Langdon R, Richmond RC, Suderman M, Koestler DC, Kelsey KT, Kazmi N, Penfold C, Ho KM, McArdle W, Ring SM, Pring M, Waterboer T, Pawlita M, Gaunt TR, Davey Smith G, Thomas S, Ness AR, Relton CL.

Oral Oncol. 2018 Oct;85:87-94. doi: 10.1016/j.oraloncology.2018.08.021. Epub 2018 Sep 5.


Tracing human stem cell lineage during development using DNA methylation.

Salas LA, Wiencke JK, Koestler DC, Zhang Z, Christensen BC, Kelsey KT.

Genome Res. 2018 Sep;28(9):1285-1295. doi: 10.1101/gr.233213.117. Epub 2018 Aug 2.


Sex-specific epigenetic mediators between early life social disadvantage and adulthood BMI.

Chu SH, Loucks EB, Kelsey KT, Gilman SE, Agha G, Eaton CB, Buka SL, Huang YT.

Epigenomics. 2018 Jun;10(6):707-722. doi: 10.2217/epi-2017-0146. Epub 2018 Jun 11.


MicroRNA-Related Genetic Variants Associated with Survival of Head and Neck Squamous Cell Carcinoma.

Wilkins OM, Titus AJ, Salas LA, Gui J, Eliot M, Butler RA, Sturgis EM, Li G, Kelsey KT, Christensen BC.

Cancer Epidemiol Biomarkers Prev. 2019 Jan;28(1):127-136. doi: 10.1158/1055-9965.EPI-18-0002. Epub 2018 Jun 7.


An optimized library for reference-based deconvolution of whole-blood biospecimens assayed using the Illumina HumanMethylationEPIC BeadArray.

Salas LA, Koestler DC, Butler RA, Hansen HM, Wiencke JK, Kelsey KT, Christensen BC.

Genome Biol. 2018 May 29;19(1):64. doi: 10.1186/s13059-018-1448-7.


Association of Neutrophil-to-Lymphocyte Ratio With Mortality and Cardiovascular Disease in the Jackson Heart Study and Modification by the Duffy Antigen Variant.

Kim S, Eliot M, Koestler DC, Wu WC, Kelsey KT.

JAMA Cardiol. 2018 Jun 1;3(6):455-462. doi: 10.1001/jamacardio.2018.1042.


Variability and predictors of serum perfluoroalkyl substance concentrations during pregnancy and early childhood.

Kingsley SL, Eliot MN, Kelsey KT, Calafat AM, Ehrlich S, Lanphear BP, Chen A, Braun JM.

Environ Res. 2018 Aug;165:247-257. doi: 10.1016/j.envres.2018.04.033. Epub 2018 May 7.


Immunomethylomics: A Novel Cancer Risk Prediction Tool.

Kelsey KT, Wiencke JK.

Ann Am Thorac Soc. 2018 Apr;15(Suppl 2):S76-S80. doi: 10.1513/AnnalsATS.201706-477MG. Review.


Differential expression and prognostic value of long non-coding RNA in HPV-negative head and neck squamous cell carcinoma.

Haque SU, Niu L, Kuhnell D, Hendershot J, Biesiada J, Niu W, Hagan MC, Kelsey KT, Casper KA, Wise-Draper TM, Medvedovic M, Langevin SM.

Head Neck. 2018 Jul;40(7):1555-1564. doi: 10.1002/hed.25136. Epub 2018 Mar 25.


Genome-Wide DNA Methylation in Prediagnostic Blood and Bladder Cancer Risk in the Women's Health Initiative.

Jordahl KM, Randolph TW, Song X, Sather CL, Tinker LF, Phipps AI, Kelsey KT, White E, Bhatti P.

Cancer Epidemiol Biomarkers Prev. 2018 Jun;27(6):689-695. doi: 10.1158/1055-9965.EPI-17-0951. Epub 2018 Mar 14.


Alcohol consumption and lung cancer risk in never smokers: a pooled analysis of case-control studies.

García Lavandeira JA, Ruano-Ravina A, Kelsey KT, Torres-Durán M, Parente-Lamelas I, Leiro-Fernández V, Zapata M, Abal-Arca J, Vidal-García I, Montero-Martínez C, Amenedo M, Castro-Añón O, Golpe-Gómez A, Guzmán-Taveras R, Martínez C, Provencio M, Mejuto-Martí MJ, García-García S, Fernández-Villar A, Piñeiro M, Barros-Dios JM.

Eur J Public Health. 2018 Jun 1;28(3):521-527. doi: 10.1093/eurpub/ckx196.


Action levels for indoor radon: different risks for the same lung carcinogen?

Ruano-Ravina A, Kelsey KT, Fernández-Villar A, Barros-Dios JM.

Eur Respir J. 2017 Nov 9;50(5). pii: 1701609. doi: 10.1183/13993003.01609-2017. Print 2017 Nov. No abstract available.


Environmental tobacco smoke exposure and EGFR and ALK alterations in never smokers' lung cancer. Results from the LCRINS study.

Torres-Durán M, Ruano-Ravina A, Kelsey KT, Parente-Lamelas I, Leiro-Fernández V, Abdulkader I, Provencio M, Abal-Arca J, Castro-Añón O, Montero-Martínez C, Vidal-García I, Amenedo M, Golpe-Gómez A, Martínez C, Guzmán-Taveras R, Mejuto-Martí MJ, Fernández-Villar A, Barros-Dios JM.

Cancer Lett. 2017 Dec 28;411:130-135. doi: 10.1016/j.canlet.2017.09.042. Epub 2017 Oct 5.


Maternal ambient air pollution, preterm birth and markers of fetal growth in Rhode Island: results of a hospital-based linkage study.

Kingsley SL, Eliot MN, Glazer K, Awad YA, Schwartz JD, Savitz DA, Kelsey KT, Marsit CJ, Wellenius GA.

J Epidemiol Community Health. 2017 Dec;71(12):1131-1136. doi: 10.1136/jech-2017-208963. Epub 2017 Sep 25.



Wyss AB, Hashibe M, Lee YA, Chuang SC, Muscat J, Chen C, Schwartz SM, Smith E, Zhang ZF, Morgenstern H, Wei Q, Li G, Kelsey KT, Winn DM, Gillison ML, Zevallos JP, Boffetta P, Olshan AF.

Am J Epidemiol. 2017 Sep 1;186(5):625-626. doi: 10.1093/aje/kwx212. No abstract available.


Maternal residential air pollution and placental imprinted gene expression.

Kingsley SL, Deyssenroth MA, Kelsey KT, Awad YA, Kloog I, Schwartz JD, Lambertini L, Chen J, Marsit CJ, Wellenius GA.

Environ Int. 2017 Nov;108:204-211. doi: 10.1016/j.envint.2017.08.022. Epub 2017 Sep 5.


Maternal serum PFOA concentration and DNA methylation in cord blood: A pilot study.

Kingsley SL, Kelsey KT, Butler R, Chen A, Eliot MN, Romano ME, Houseman A, Koestler DC, Lanphear BP, Yolton K, Braun JM.

Environ Res. 2017 Oct;158:174-178. doi: 10.1016/j.envres.2017.06.013. Epub 2017 Jun 20.


Residential radon exposure and brain cancer: an ecological study in a radon prone area (Galicia, Spain).

Ruano-Ravina A, Aragonés N, Kelsey KT, Pérez-Ríos M, Piñeiro-Lamas M, López-Abente G, Barros-Dios JM.

Sci Rep. 2017 Jun 15;7(1):3595. doi: 10.1038/s41598-017-03938-9.


Genome-scale identification of microRNA-related SNPs associated with risk of head and neck squamous cell carcinoma.

Wilkins OM, Titus AJ, Gui J, Eliot M, Butler RA, Sturgis EM, Li G, Kelsey KT, Christensen BC.

Carcinogenesis. 2017 Oct 1;38(10):986-993. doi: 10.1093/carcin/bgx056.


The Intersection of Aging Biology and the Pathobiology of Lung Diseases: A Joint NHLBI/NIA Workshop.

Budinger GRS, Kohanski RA, Gan W, Kobor MS, Amaral LA, Armanios M, Kelsey KT, Pardo A, Tuder R, Macian F, Chandel N, Vaughan D, Rojas M, Mora AL, Kovacs E, Duncan SR, Finkel T, Choi A, Eickelberg O, Chen D, Agusti A, Selman M, Balch WE, Busse P, Lin A, Morimoto R, Sznajder JI, Thannickal VJ.

J Gerontol A Biol Sci Med Sci. 2017 Oct 12;72(11):1492-1500. doi: 10.1093/gerona/glx090. Review.


Radon exposure and tumors of the central nervous system.

Ruano-Ravina A, Dacosta-Urbieta A, Barros-Dios JM, Kelsey KT.

Gac Sanit. 2018 Nov - Dec;32(6):567-575. doi: 10.1016/j.gaceta.2017.01.002. Epub 2017 Mar 18.


Immunomethylomic approach to explore the blood neutrophil lymphocyte ratio (NLR) in glioma survival.

Wiencke JK, Koestler DC, Salas LA, Wiemels JL, Roy RP, Hansen HM, Rice T, McCoy LS, Bracci PM, Molinaro AM, Kelsey KT, Wrensch MR, Christensen BC.

Clin Epigenetics. 2017 Feb 2;9:10. doi: 10.1186/s13148-017-0316-8. eCollection 2017.


DNA Methylation-Derived Neutrophil-to-Lymphocyte Ratio: An Epigenetic Tool to Explore Cancer Inflammation and Outcomes.

Koestler DC, Usset J, Christensen BC, Marsit CJ, Karagas MR, Kelsey KT, Wiencke JK.

Cancer Epidemiol Biomarkers Prev. 2017 Mar;26(3):328-338. doi: 10.1158/1055-9965.EPI-16-0461. Epub 2016 Dec 13.


Immune Response to HPV16 E6 and E7 Proteins and Patient Outcomes in Head and Neck Cancer.

Nelson HH, Pawlita M, Michaud DS, McClean M, Langevin SM, Eliot MN, Kelsey KT.

JAMA Oncol. 2017 Feb 1;3(2):178-185. doi: 10.1001/jamaoncol.2016.4500.


Epigenetic Mediators Between Childhood Socioeconomic Disadvantage and Mid-Life Body Mass Index: The New England Family Study.

Loucks EB, Huang YT, Agha G, Chu S, Eaton CB, Gilman SE, Buka SL, Kelsey KT.

Psychosom Med. 2016 Nov/Dec;78(9):1053-1065.


Residential radon, EGFR mutations and ALK alterations in never-smoking lung cancer cases.

Ruano-Ravina A, Torres-Durán M, Kelsey KT, Parente-Lamelas I, Leiro-Fernández V, Abdulkader I, Abal-Arca J, Montero-Martínez C, Vidal-García I, Amenedo M, Castro-Añón O, Golpe-Gómez A, González-Barcala J, Martínez C, Guzmán-Taveras R, Provencio M, Mejuto-Martí MJ, Fernández-Villar A, Barros-Dios JM.

Eur Respir J. 2016 Nov;48(5):1462-1470. doi: 10.1183/13993003.00407-2016. Epub 2016 Oct 6.


Residential radon and COPD. An ecological study in Galicia, Spain.

Barbosa-Lorenzo R, Ruano-Ravina A, Ramis R, Aragonés N, Kelsey KT, Carballeira-Roca C, Fernández-Villar A, López-Abente G, Barros-Dios JM.

Int J Radiat Biol. 2017 Feb;93(2):222-230. doi: 10.1080/09553002.2017.1238526. Epub 2016 Nov 17.


A new timepiece: an epigenetic mitotic clock.

Christensen BC, Kelsey KT.

Genome Biol. 2016 Oct 19;17(1):216.


Smokeless Tobacco Use and the Risk of Head and Neck Cancer: Pooled Analysis of US Studies in the INHANCE Consortium.

Wyss AB, Hashibe M, Lee YA, Chuang SC, Muscat J, Chen C, Schwartz SM, Smith E, Zhang ZF, Morgenstern H, Wei Q, Li G, Kelsey KT, McClean M, Winn DM, Schantz S, Yu GP, Gillison ML, Zevallos JP, Boffetta P, Olshan AF.

Am J Epidemiol. 2016 Nov 15;184(10):703-716. doi: 10.1093/aje/kww075.


Enlarged leukocyte referent libraries can explain additional variance in blood-based epigenome-wide association studies.

Kim S, Eliot M, Koestler DC, Houseman EA, Wetmur JG, Wiencke JK, Kelsey KT.

Epigenomics. 2016 Sep;8(9):1185-92. doi: 10.2217/epi-2016-0037. Epub 2016 Aug 16.


Epigenetic epidemiology as a tool to understand the role of immunity in chronic disease.

Nelson HH, Kelsey KT.

Epigenomics. 2016 Aug;8(8):1007-9. doi: 10.2217/epi-2016-0055. Epub 2016 Jul 13. No abstract available.

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