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Immune Responses to Avian Influenza Viruses.

Koutsakos M, Kedzierska K, Subbarao K.

J Immunol. 2019 Jan 15;202(2):382-391. doi: 10.4049/jimmunol.1801070. Review.


With a Little Help from T Follicular Helper Friends: Humoral Immunity to Influenza Vaccination.

Koutsakos M, Nguyen THO, Kedzierska K.

J Immunol. 2019 Jan 15;202(2):360-367. doi: 10.4049/jimmunol.1800986. Review.


Biocompatibility of synthetic ultraviolet radiation cross-linked polymers - Subcutaneous implantation study.

Zair L, Marchlewicz M, Tejchman K, Zeair S, Kędzierska K, Stępniewska J, Domański M, Kazimierczak A, Duchnik E, Ostrowski M.

J Biomed Mater Res B Appl Biomater. 2018 Dec 21. doi: 10.1002/jbm.b.34281. [Epub ahead of print]


Broad CD8+ T cell cross-recognition of distinct influenza A strains in humans.

Grant EJ, Josephs TM, Loh L, Clemens EB, Sant S, Bharadwaj M, Chen W, Rossjohn J, Gras S, Kedzierska K.

Nat Commun. 2018 Dec 21;9(1):5427. doi: 10.1038/s41467-018-07815-5.


A Multiplex Droplet Digital PCR Assay for Quantification of HTLV-1c DNA Proviral Load and T-Cells from Blood and Respiratory Exudates Sampled in a Remote Setting.

Yurick D, Khoury G, Clemens B, Loh L, Pham H, Kedzierska K, Einsiedel L, Purcell D.

J Clin Microbiol. 2018 Dec 5. pii: JCM.01063-18. doi: 10.1128/JCM.01063-18. [Epub ahead of print]


MAIT cells contribute to protection against lethal influenza infection in vivo.

Wilgenburg BV, Loh L, Chen Z, Pediongco TJ, Wang H, Shi M, Zhao Z, Koutsakos M, Nüssing S, Sant S, Wang Z, D'Souza C, Jia X, Almeida CF, Kostenko L, Eckle SBG, Meehan BS, Kallies A, Godfrey DI, Reading PC, Corbett AJ, McCluskey J, Klenerman P, Kedzierska K, Hinks TSC.

Nat Commun. 2018 Nov 9;9(1):4706. doi: 10.1038/s41467-018-07207-9.


Limited Phenotypic and Functional Plasticity of Influenza Virus-Specific Memory CD8+ T Cells during Activation in an Alternative Cytokine Environment.

Harland KL, Fox A, Nüssing S, Hensen L, Kedzierska K, Turner SJ, Kelso A.

J Immunol. 2018 Dec 1;201(11):3282-3293. doi: 10.4049/jimmunol.1701672. Epub 2018 Oct 26.


Back to the Future: Lessons Learned From the 1918 Influenza Pandemic.

Short KR, Kedzierska K, van de Sandt CE.

Front Cell Infect Microbiol. 2018 Oct 8;8:343. doi: 10.3389/fcimb.2018.00343. eCollection 2018. Review.


Genomic analysis of DNA repair genes and androgen signaling in prostate cancer.

Jividen K, Kedzierska KZ, Yang CS, Szlachta K, Ratan A, Paschal BM.

BMC Cancer. 2018 Oct 10;18(1):960. doi: 10.1186/s12885-018-4848-x.


The Drivers of Pathology in Zoonotic Avian Influenza: The Interplay Between Host and Pathogen.

Horman WSJ, Nguyen THO, Kedzierska K, Bean AGD, Layton DS.

Front Immunol. 2018 Aug 8;9:1812. doi: 10.3389/fimmu.2018.01812. eCollection 2018. Review.


Correlation Between Percentage of Immuncompetent CD4+ and CD4+CD25+ Cells and Compatibility in the HLA System and Selected Parameters Assessing Transplanted Kidney Function.

Sieńko J, Kotowski M, Dziewanowski K, Wojciuk B, Paczkowska E, Kędzierska K, Tejchman K, Stasiuk R, Zair L, Ostrowski M, Machaliński B.

Transplant Proc. 2018 Jul - Aug;50(6):1738-1743. doi: 10.1016/j.transproceed.2018.04.053. Epub 2018 May 1.


Single-Cell Approach to Influenza-Specific CD8+ T Cell Receptor Repertoires Across Different Age Groups, Tissues, and Following Influenza Virus Infection.

Sant S, Grzelak L, Wang Z, Pizzolla A, Koutsakos M, Crowe J, Loudovaris T, Mannering SI, Westall GP, Wakim LM, Rossjohn J, Gras S, Richards M, Xu J, Thomas PG, Loh L, Nguyen THO, Kedzierska K.

Front Immunol. 2018 Jun 27;9:1453. doi: 10.3389/fimmu.2018.01453. eCollection 2018.



Krammer F, Smith GJD, Fouchier RAM, Peiris M, Kedzierska K, Doherty PC, Palese P, Shaw ML, Treanor J, Webster RG, García-Sastre A.

Nat Rev Dis Primers. 2018 Jun 28;4(1):3. doi: 10.1038/s41572-018-0002-y. Review. No abstract available.


SONiCS: PCR stutter noise correction in genome-scale microsatellites.

Kedzierska KZ, Gerber L, Cagnazzi D, Krützen M, Ratan A, Kistler L.

Bioinformatics. 2018 Dec 1;34(23):4115-4117. doi: 10.1093/bioinformatics/bty485.


Age-Related Decline in Primary CD8+ T Cell Responses Is Associated with the Development of Senescence in Virtual Memory CD8+ T Cells.

Quinn KM, Fox A, Harland KL, Russ BE, Li J, Nguyen THO, Loh L, Olshanksy M, Naeem H, Tsyganov K, Wiede F, Webster R, Blyth C, Sng XYX, Tiganis T, Powell D, Doherty PC, Turner SJ, Kedzierska K, La Gruta NL.

Cell Rep. 2018 Jun 19;23(12):3512-3524. doi: 10.1016/j.celrep.2018.05.057.


Exposure of Human CD8+ T Cells to Type-2 Cytokines Impairs Division and Differentiation and Induces Limited Polarization.

Fox A, Harland KL, Kedzierska K, Kelso A.

Front Immunol. 2018 May 28;9:1141. doi: 10.3389/fimmu.2018.01141. eCollection 2018.


Enumeration, functional responses and cytotoxic capacity of MAIT cells in newly diagnosed and relapsed multiple myeloma.

Gherardin NA, Loh L, Admojo L, Davenport AJ, Richardson K, Rogers A, Darcy PK, Jenkins MR, Prince HM, Harrison SJ, Quach H, Fairlie DP, Kedzierska K, McCluskey J, Uldrich AP, Neeson PJ, Ritchie DS, Godfrey DI.

Sci Rep. 2018 Mar 7;8(1):4159. doi: 10.1038/s41598-018-22130-1.


Clonally diverse CD38+HLA-DR+CD8+ T cells persist during fatal H7N9 disease.

Wang Z, Zhu L, Nguyen THO, Wan Y, Sant S, Quiñones-Parra SM, Crawford JC, Eltahla AA, Rizzetto S, Bull RA, Qiu C, Koutsakos M, Clemens EB, Loh L, Chen T, Liu L, Cao P, Ren Y, Kedzierski L, Kotsimbos T, McCaw JM, La Gruta NL, Turner SJ, Cheng AC, Luciani F, Zhang X, Doherty PC, Thomas PG, Xu J, Kedzierska K.

Nat Commun. 2018 Feb 26;9(1):824. doi: 10.1038/s41467-018-03243-7.


Circulating TFH cells, serological memory, and tissue compartmentalization shape human influenza-specific B cell immunity.

Koutsakos M, Wheatley AK, Loh L, Clemens EB, Sant S, Nüssing S, Fox A, Chung AW, Laurie KL, Hurt AC, Rockman S, Lappas M, Loudovaris T, Mannering SI, Westall GP, Elliot M, Tangye SG, Wakim LM, Kent SJ, Nguyen THO, Kedzierska K.

Sci Transl Med. 2018 Feb 14;10(428). pii: eaan8405. doi: 10.1126/scitranslmed.aan8405.


Innate and adaptive T cells in influenza disease.

Nüssing S, Sant S, Koutsakos M, Subbarao K, Nguyen THO, Kedzierska K.

Front Med. 2018 Feb;12(1):34-47. doi: 10.1007/s11684-017-0606-8. Epub 2018 Jan 20. Review.


Influenza-specific lung-resident memory T cells are proliferative and polyfunctional and maintain diverse TCR profiles.

Pizzolla A, Nguyen TH, Sant S, Jaffar J, Loudovaris T, Mannering SI, Thomas PG, Westall GP, Kedzierska K, Wakim LM.

J Clin Invest. 2018 Feb 1;128(2):721-733. doi: 10.1172/JCI96957. Epub 2018 Jan 8.


Live Attenuated Influenza Vaccines engineered to express the nucleoprotein of a recent isolate stimulate human influenza CD8+ T cells more relevant to current infections.

Korenkov D, Nguyen THO, Isakova-Sivak I, Smolonogina T, Brown LE, Kedzierska K, Rudenko L.

Hum Vaccin Immunother. 2018 Apr 3;14(4):941-946. doi: 10.1080/21645515.2017.1417713. Epub 2018 Jan 23.


Augmenting Influenza-Specific T Cell Memory Generation with a Natural Killer T Cell-Dependent Glycolipid-Peptide Vaccine.

Anderson RJ, Li J, Kedzierski L, Compton BJ, Hayman CM, Osmond TL, Tang CW, Farrand KJ, Koay HF, Almeida CFDSSE, Holz LR, Williams GM, Brimble MA, Wang Z, Koutsakos M, Kedzierska K, Godfrey DI, Hermans IF, Turner SJ, Painter GF.

ACS Chem Biol. 2017 Nov 17;12(11):2898-2905. doi: 10.1021/acschembio.7b00845. Epub 2017 Oct 27.


VDJdb: a curated database of T-cell receptor sequences with known antigen specificity.

Shugay M, Bagaev DV, Zvyagin IV, Vroomans RM, Crawford JC, Dolton G, Komech EA, Sycheva AL, Koneva AE, Egorov ES, Eliseev AV, Van Dyk E, Dash P, Attaf M, Rius C, Ladell K, McLaren JE, Matthews KK, Clemens EB, Douek DC, Luciani F, van Baarle D, Kedzierska K, Kesmir C, Thomas PG, Price DA, Sewell AK, Chudakov DM.

Nucleic Acids Res. 2018 Jan 4;46(D1):D419-D427. doi: 10.1093/nar/gkx760.


Perturbed CD8+ T cell immunity across universal influenza epitopes in the elderly.

Nguyen THO, Sant S, Bird NL, Grant EJ, Clemens EB, Koutsakos M, Valkenburg SA, Gras S, Lappas M, Jaworowski A, Crowe J, Loh L, Kedzierska K.

J Leukoc Biol. 2018 Feb;103(2):321-339. doi: 10.1189/jlb.5MA0517-207R. Epub 2017 Dec 29.


Extrinsically derived TNF is primarily responsible for limiting antiviral CD8+ T cell response magnitude.

Quinn KM, Kan WT, Watson KA, Liddicoat BJ, Swan NG, McQuilten H, Denton AE, Li J, Chen W, Brown LE, Jackson DC, Reading PC, Doherty PC, Kedzierska K, Kedzierski L, Turner SJ, La Gruta NL.

PLoS One. 2017 Sep 8;12(9):e0184732. doi: 10.1371/journal.pone.0184732. eCollection 2017.


Molecular basis for increased susceptibility of Indigenous North Americans to seropositive rheumatoid arthritis.

Scally SW, Law SC, Ting YT, Heemst JV, Sokolove J, Deutsch AJ, Bridie Clemens E, Moustakas AK, Papadopoulos GK, van der Woude D, Smolik I, Hitchon CA, Robinson DB, Ferucci ED, Bernstein CN, Meng X, Anaparti V, Huizinga T, Kedzierska K, Reid HH, Raychaudhuri S, Toes RE, Rossjohn J, El-Gabalawy H, Thomas R.

Ann Rheum Dis. 2017 Nov;76(11):1915-1923. doi: 10.1136/annrheumdis-2017-211300. Epub 2017 Aug 11.


Towards identification of immune and genetic correlates of severe influenza disease in Indigenous Australians.

Clemens EB, Grant EJ, Wang Z, Gras S, Tipping P, Rossjohn J, Miller A, Tong SYC, Kedzierska K.

Immunol Cell Biol. 2017 Aug;95(7):648. doi: 10.1038/icb.2017.47.


Fc functional antibodies in humans with severe H7N9 and seasonal influenza.

Vanderven HA, Liu L, Ana-Sosa-Batiz F, Nguyen TH, Wan Y, Wines B, Hogarth PM, Tilmanis D, Reynaldi A, Parsons MS, Hurt AC, Davenport MP, Kotsimbos T, Cheng AC, Kedzierska K, Zhang X, Xu J, Kent SJ.

JCI Insight. 2017 Jul 6;2(13). pii: 92750. doi: 10.1172/jci.insight.92750. [Epub ahead of print]


Quantifiable predictive features define epitope-specific T cell receptor repertoires.

Dash P, Fiore-Gartland AJ, Hertz T, Wang GC, Sharma S, Souquette A, Crawford JC, Clemens EB, Nguyen THO, Kedzierska K, La Gruta NL, Bradley P, Thomas PG.

Nature. 2017 Jul 6;547(7661):89-93. doi: 10.1038/nature22383. Epub 2017 Jun 21.


Clinical and Biochemical Characteristics of Brain-Dead Donors as Predictors of Early- and Long-Term Renal Function After Transplant.

Kwiatkowska E, Domański L, Bober J, Safranow K, Pawlik A, Ciechanowski K, Wiśniewska M, Kędzierska K.

Exp Clin Transplant. 2017 Aug;15(4):387-393. doi: 10.6002/ect.2016.0145. Epub 2017 Jun 16.


Nasal-associated lymphoid tissues (NALTs) support the recall but not priming of influenza virus-specific cytotoxic T cells.

Pizzolla A, Wang Z, Groom JR, Kedzierska K, Brooks AG, Reading PC, Wakim LM.

Proc Natl Acad Sci U S A. 2017 May 16;114(20):5225-5230. doi: 10.1073/pnas.1620194114. Epub 2017 May 1.


Understanding CD8+ T-cell responses toward the native and alternate HLA-A*02:01-restricted WT1 epitope.

Nguyen TH, Tan AC, Xiang SD, Goubier A, Harland KL, Clemens EB, Plebanski M, Kedzierska K.

Clin Transl Immunology. 2017 Mar 17;6(3):e134. doi: 10.1038/cti.2017.4. eCollection 2017 Mar.


Uncomplicated Cystitis in an Adult Male Following Influenza B Virus Infection.

Allen RJ, Koutsakos M, Hurt AC, Kedzierska K.

Am J Case Rep. 2017 Feb 22;18:190-193.


Suppressor of cytokine signaling (SOCS)5 ameliorates influenza infection via inhibition of EGFR signaling.

Kedzierski L, Tate MD, Hsu AC, Kolesnik TB, Linossi EM, Dagley L, Dong Z, Freeman S, Infusini G, Starkey MR, Bird NL, Chatfield SM, Babon JJ, Huntington N, Belz G, Webb A, Wark PA, Nicola NA, Xu J, Kedzierska K, Hansbro PM, Nicholson SE.

Elife. 2017 Feb 14;6. pii: e20444. doi: 10.7554/eLife.20444.


The role of CD27 in anti-viral T-cell immunity.

Grant EJ, Nüssing S, Sant S, Clemens EB, Kedzierska K.

Curr Opin Virol. 2017 Feb;22:77-88. doi: 10.1016/j.coviro.2016.12.001. Epub 2017 Jan 12. Review.


On the Role of CD8+ T Cells in Determining Recovery Time from Influenza Virus Infection.

Cao P, Wang Z, Yan AW, McVernon J, Xu J, Heffernan JM, Kedzierska K, McCaw JM.

Front Immunol. 2016 Dec 20;7:611. doi: 10.3389/fimmu.2016.00611. eCollection 2016.


Establishment of memory CD8+ T cells with live attenuated influenza virus across different vaccination doses.

Wang Z, Kedzierski L, Nuessing S, Chua BY, Quiñones-Parra SM, Huber VC, Jackson DC, Thomas PG, Kedzierska K.

J Gen Virol. 2016 Dec;97(12):3205-3214. doi: 10.1099/jgv.0.000651. Epub 2016 Nov 2.


Birth defects in juvenile Wistar rats after exposure to immunosuppressive drugs during pregnancy.

Kabat-Koperska J, Kolasa-Wołosiuk A, Pilutin A, Safranow K, Kosik-Bogacka D, Baranowska-Bosiacka I, Gołembiewska E, Kędzierska K, Domański L, Ciechanowski K.

Histol Histopathol. 2017 Jan;32(1):43-55. doi: 10.14670/HH-11-769. Epub 2016 Apr 21.


The Role of Klotho Protein in Chronic Kidney Disease: Studies in Animals and Humans.

Gołembiewska E, Stępniewska J, Kabat-Koperska J, Kędzierska K, Domański M, Ciechanowski K.

Curr Protein Pept Sci. 2016;17(8):821-826. Review.


A three-stage intrathymic development pathway for the mucosal-associated invariant T cell lineage.

Koay HF, Gherardin NA, Enders A, Loh L, Mackay LK, Almeida CF, Russ BE, Nold-Petry CA, Nold MF, Bedoui S, Chen Z, Corbett AJ, Eckle SB, Meehan B, d'Udekem Y, Konstantinov IE, Lappas M, Liu L, Goodnow CC, Fairlie DP, Rossjohn J, Chong MM, Kedzierska K, Berzins SP, Belz GT, McCluskey J, Uldrich AP, Godfrey DI, Pellicci DG.

Nat Immunol. 2016 Nov;17(11):1300-1311. doi: 10.1038/ni.3565. Epub 2016 Sep 26.


Effects of an immunosuppressive treatment on the rat prostate.

Grabowska M, Kędzierska K, Michałek K, Słuczanowska-Głąbowska S, Grabowski M, Piasecka M, Kram A, Rotter I, Rył A, Laszczyńska M.

Drug Des Devel Ther. 2016 Sep 12;10:2899-2915. eCollection 2016.


Lack of Heterologous Cross-reactivity toward HLA-A*02:01 Restricted Viral Epitopes Is Underpinned by Distinct αβT Cell Receptor Signatures.

Grant EJ, Josephs TM, Valkenburg SA, Wooldridge L, Hellard M, Rossjohn J, Bharadwaj M, Kedzierska K, Gras S.

J Biol Chem. 2016 Nov 18;291(47):24335-24351. Epub 2016 Sep 19.


Corrigendum to 'Human influenza viruses and CD8+ T cell responses' [Curr. Opin. Virol. 16 (2016) 132-142].

Grant EJ, Quiñones-Parra SM, Clemens EB, Kedzierska K.

Curr Opin Virol. 2016 Aug;19:99. doi: 10.1016/j.coviro.2016.08.015. No abstract available.


The influence of exposure to immunosuppressive treatment during pregnancy on renal function and rate of apoptosis in native kidneys of female Wistar rats.

Kabat-Koperska J, Kolasa-Wołosiuk A, Baranowska-Bosiacka I, Safranow K, Kosik-Bogacka D, Gutowska I, Pilutin A, Gołembiewska E, Kędzierska K, Ciechanowski K.

Apoptosis. 2016 Nov;21(11):1240-1248.


Human mucosal-associated invariant T cells contribute to antiviral influenza immunity via IL-18-dependent activation.

Loh L, Wang Z, Sant S, Koutsakos M, Jegaskanda S, Corbett AJ, Liu L, Fairlie DP, Crowe J, Rossjohn J, Xu J, Doherty PC, McCluskey J, Kedzierska K.

Proc Natl Acad Sci U S A. 2016 Sep 6;113(36):10133-8. doi: 10.1073/pnas.1610750113. Epub 2016 Aug 19.


Maintenance of the EBV-specific CD8+ TCRαβ repertoire in immunosuppressed lung transplant recipients.

Nguyen TH, Bird NL, Grant EJ, Miles JJ, Thomas PG, Kotsimbos TC, Mifsud NA, Kedzierska K.

Immunol Cell Biol. 2017 Jan;95(1):77-86. doi: 10.1038/icb.2016.71. Epub 2016 Oct 4.


Effect of Immunosuppressive Therapy on Proteinogram in Rats.

Kędzierska K, Sindrewicz K, Sporniak-Tutak K, Bober J, Stańczyk-Dunaj M, Dołęgowska B, Kaliszczak R, Sieńko J, Kabat-Koperska J, Gołembiewska E, Ciechanowski K.

Med Sci Monit. 2016 Jun 11;22:1987-98.


A Role of Influenza Virus Exposure History in Determining Pandemic Susceptibility and CD8+ T Cell Responses.

Quiñones-Parra SM, Clemens EB, Wang Z, Croom HA, Kedzierski L, McVernon J, Vijaykrishna D, Kedzierska K.

J Virol. 2016 Jul 11;90(15):6936-6947. doi: 10.1128/JVI.00349-16. Print 2016 Aug 1.


Wegener's granulomatosis and pyoderma gangrenosum--rare causes of facial ulcerations.

Kędzierska K, Sindrewicz K, Smektała T, Wiśniewska M, Masiuk M, Staniszewska E, Sporniak-Tutak K, Gołembiewska E, Ciechanowski K.

Postepy Hig Med Dosw (Online). 2016 Mar 16;70:210-8. doi: 10.5604/17322693.1197372. Review.

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