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Genetic benefits of genomic selection breeding programmes considering foreign sire contributions.

Matthews D, Kearney JF, Cromie AR, Hely FS, Amer PR.

Genet Sel Evol. 2019 Jul 16;51(1):40. doi: 10.1186/s12711-019-0483-5.


Chemical Synthesis and Application of Biotinylated Oligo-α-(1 → 3)-d-Glucosides To Study the Antibody and Cytokine Response against the Cell Wall α-(1 → 3)-d-Glucan of Aspergillus fumigatus.

Komarova BS, Wong SSW, Orekhova MV, Tsvetkov YE, Krylov VB, Beauvais A, Bouchara JP, Kearney JF, Aimanianda V, Latgé JP, Nifantiev NE.

J Org Chem. 2018 Nov 2;83(21):12965-12976. doi: 10.1021/acs.joc.8b01142. Epub 2018 Oct 16.


Characterization of copy number variants in a large multibreed population of beef and dairy cattle using high-density single nucleotide polymorphism genotype data.

Rafter P, Purfield DC, Berry DP, Parnell AC, Gormley IC, Kearney JF, Coffey MP, Carthy TR.

J Anim Sci. 2018 Sep 29;96(10):4112-4124. doi: 10.1093/jas/sky302.


IL-7 Enables Antibody Responses to Bacterial Polysaccharides by Promoting B Cell Receptor Diversity.

Dickinson GS, Levenson EA, Walker JA, Kearney JF, Alugupalli KR.

J Immunol. 2018 Aug 15;201(4):1229-1240. doi: 10.4049/jimmunol.1800162. Epub 2018 Jul 13.


Terminal Deoxynucleotidyl Transferase Is Not Required for Antibody Response to Polysaccharide Vaccines against Streptococcus pneumoniae and Salmonella enterica Serovar Typhi.

Belde V, Cravens MP, Gulandijany D, Walker JA, Palomo-Caturla I, Alugupalli AS, Sandilya VK, Mahmoud T, Bäumler AJ, Kearney JF, Alugupalli KR.

Infect Immun. 2018 Aug 22;86(9). pii: e00211-18. doi: 10.1128/IAI.00211-18. Print 2018 Sep.


Myeloid-Derived Suppressor Cells Impair B Cell Responses in Lung Cancer through IL-7 and STAT5.

Wang Y, Schafer CC, Hough KP, Tousif S, Duncan SR, Kearney JF, Ponnazhagan S, Hsu HC, Deshane JS.

J Immunol. 2018 Jul 1;201(1):278-295. doi: 10.4049/jimmunol.1701069. Epub 2018 May 11.


SNP Data Quality Control in a National Beef and Dairy Cattle System and Highly Accurate SNP Based Parentage Verification and Identification.

McClure MC, McCarthy J, Flynn P, McClure JC, Dair E, O'Connell DK, Kearney JF.

Front Genet. 2018 Mar 15;9:84. doi: 10.3389/fgene.2018.00084. eCollection 2018.


Accuracy of the ACS NSQIP Online Risk Calculator Depends on How You Look at It: Results from the United States Gastric Cancer Collaborative.

Beal EW, Saunders ND, Kearney JF, Lyon E, Wei L, Squires MH, Jin LX, Worhunsky DJ, Votanopoulos KI, Ejaz A, Poultsides G, Fields RC, Swords D, Acher AW, Weber SM, Maithel SK, Pawlik T, Schmidt CR.

Am Surg. 2018 Mar 1;84(3):358-364.


Genomic Characterisation of the Indigenous Irish Kerry Cattle Breed.

Browett S, McHugo G, Richardson IW, Magee DA, Park SDE, Fahey AG, Kearney JF, Correia CN, Randhawa IAS, MacHugh DE.

Front Genet. 2018 Feb 19;9:51. doi: 10.3389/fgene.2018.00051. eCollection 2018.


Accelerated Systemic Autoimmunity in the Absence of Somatic Hypermutation in 564Igi: A Mouse Model of Systemic Lupus with Knocked-In Heavy and Light Chain Genes.

McDonald G, Medina CO, Pilichowska M, Kearney JF, Shinkura R, Selsing E, Wortis HH, Honjo T, Imanishi-Kari T.

Front Immunol. 2017 Sep 13;8:1094. doi: 10.3389/fimmu.2017.01094. eCollection 2017.


Irgm1 coordinately regulates autoimmunity and host defense at select mucosal surfaces.

Azzam KM, Madenspacher JH, Cain DW, Lai L, Gowdy KM, Rai P, Janardhan K, Clayton N, Cunningham W, Jensen H, Patel PS, Kearney JF, Taylor GA, Fessler MB.

JCI Insight. 2017 Aug 17;2(16). pii: 91914. doi: 10.1172/jci.insight.91914. eCollection 2017 Aug 17.


CD36 and Platelet-Activating Factor Receptor Promote House Dust Mite Allergy Development.

Patel PS, Kearney JF.

J Immunol. 2017 Aug 1;199(3):1184-1195. doi: 10.4049/jimmunol.1700034. Epub 2017 Jun 30.


Interval Magnetic Resonance Imaging: an Alternative to Guidelines for Indeterminate Nodules Discovered in the Cirrhotic Liver.

Beal EW, Kearney JF, Chakedis JM, James Hanje A, Conteh LF, Black SM, Washburn K, Dittmar KM, Pawlik TM, Dillhoff MR, Schmidt CR.

J Gastrointest Surg. 2017 Sep;21(9):1463-1470. doi: 10.1007/s11605-017-3454-6. Epub 2017 May 26.


Transitional B cells commit to marginal zone B cell fate by Taok3-mediated surface expression of ADAM10.

Hammad H, Vanderkerken M, Pouliot P, Deswarte K, Toussaint W, Vergote K, Vandersarren L, Janssens S, Ramou I, Savvides SN, Haigh JJ, Hendriks R, Kopf M, Craessaerts K, de Strooper B, Kearney JF, Conrad DH, Lambrecht BN.

Nat Immunol. 2017 Mar;18(3):313-320. doi: 10.1038/ni.3657. Epub 2017 Jan 9.


Ultra-low-density genotype panels for breed assignment of Angus and Hereford cattle.

Judge MM, Kelleher MM, Kearney JF, Sleator RD, Berry DP.

Animal. 2017 Jun;11(6):938-947. doi: 10.1017/S1751731116002457. Epub 2016 Nov 24.


Pulmonary α-1,3-Glucan-Specific IgA-Secreting B Cells Suppress the Development of Cockroach Allergy.

Patel PS, King RG, Kearney JF.

J Immunol. 2016 Oct 15;197(8):3175-3187. Epub 2016 Aug 31. Erratum in: J Immunol. 2016 Dec 15;197(12 ):4861.


Inference of population structure of purebred dairy and beef cattle using high-density genotype data.

Kelleher MM, Berry DP, Kearney JF, McParland S, Buckley F, Purfield DC.

Animal. 2017 Jan;11(1):15-23. doi: 10.1017/S1751731116001099. Epub 2016 Jun 22.


Evaluation of developed low-density genotype panels for imputation to higher density in independent dairy and beef cattle populations.

Judge MM, Kearney JF, McClure MC, Sleator RD, Berry DP.

J Anim Sci. 2016 Mar;94(3):949-62. doi: 10.2527/jas.2015-0044.


Manipulation of the glycan-specific natural antibody repertoire for immunotherapy.

New JS, King RG, Kearney JF.

Immunol Rev. 2016 Mar;270(1):32-50. doi: 10.1111/imr.12397. Review.


B cell autophagy mediates TLR7-dependent autoimmunity and inflammation.

Weindel CG, Richey LJ, Bolland S, Mehta AJ, Kearney JF, Huber BT.

Autophagy. 2015;11(7):1010-24. doi: 10.1080/15548627.2015.1052206.


Neonatal exposure to pneumococcal phosphorylcholine modulates the development of house dust mite allergy during adult life.

Patel PS, Kearney JF.

J Immunol. 2015 Jun 15;194(12):5838-50. doi: 10.4049/jimmunol.1500251. Epub 2015 May 8.


Antibodies generated against Streptococci protect in a mouse model of disseminated aspergillosis.

Wharton RE, Stefanov EK, King RG, Kearney JF.

J Immunol. 2015 May 1;194(9):4387-96. doi: 10.4049/jimmunol.1401940. Epub 2015 Mar 27.


Natural antibody repertoires: development and functional role in inhibiting allergic airway disease.

Kearney JF, Patel P, Stefanov EK, King RG.

Annu Rev Immunol. 2015;33:475-504. doi: 10.1146/annurev-immunol-032713-120140. Epub 2015 Jan 22. Review.


Unique ligand-binding property of the human IgM Fc receptor.

Honjo K, Kubagawa Y, Kearney JF, Kubagawa H.

J Immunol. 2015 Feb 15;194(4):1975-82. doi: 10.4049/jimmunol.1401866. Epub 2015 Jan 19.


Imputation of ungenotyped parental genotypes in dairy and beef cattle from progeny genotypes.

Berry DP, McParland S, Kearney JF, Sargolzaei M, Mullen MP.

Animal. 2014 Jun;8(6):895-903. doi: 10.1017/S1751731114000883.


Dosage of X-linked Toll-like receptor 8 determines gender differences in the development of systemic lupus erythematosus.

Umiker BR, Andersson S, Fernandez L, Korgaokar P, Larbi A, Pilichowska M, Weinkauf CC, Wortis HH, Kearney JF, Imanishi-Kari T.

Eur J Immunol. 2014 May;44(5):1503-16. doi: 10.1002/eji.201344283. Epub 2014 Mar 20.


Microbicidal power of alpha radiation in sterilizing germinating Bacillus anthracis spores.

Rivera J, Morgenstern A, Bruchertseifer F, Kearney JF, Turnbough CL Jr, Dadachova E, Casadevall A.

Antimicrob Agents Chemother. 2014;58(3):1813-5. doi: 10.1128/AAC.01266-13. Epub 2013 Dec 30.


Genome-wide association study for calving traits in Holstein-Friesian dairy cattle.

Purfield DC, Bradley DG, Kearney JF, Berry DP.

Animal. 2014 Feb;8(2):224-35. doi: 10.1017/S175173111300195X. Epub 2013 Nov 20.


Extracellular matrix of secondary lymphoid organs impacts on B-cell fate and survival.

Song J, Lokmic Z, Lämmermann T, Rolf J, Wu C, Zhang X, Hallmann R, Hannocks MJ, Horn N, Ruegg MA, Sonnenberg A, Georges-Labouesse E, Winkler TH, Kearney JF, Cardell S, Sorokin L.

Proc Natl Acad Sci U S A. 2013 Jul 30;110(31):E2915-24. doi: 10.1073/pnas.1218131110. Epub 2013 Jul 11.


The absence of a microbiota enhances TSLP expression in mice with defective skin barrier but does not affect the severity of their allergic inflammation.

Yockey LJ, Demehri S, Turkoz M, Turkoz A, Ahern PP, Jassim O, Manivasagam S, Kearney JF, Gordon JI, Kopan R.

J Invest Dermatol. 2013 Dec;133(12):2714-2721. doi: 10.1038/jid.2013.228. Epub 2013 May 22.


The link between antibodies to OxLDL and natural protection against pneumococci depends on D(H) gene conservation.

Vale AM, Kapoor P, Skibinski GA, Elgavish A, Mahmoud TI, Zemlin C, Zemlin M, Burrows PD, Nobrega A, Kearney JF, Briles DE, Schroeder HW Jr.

J Exp Med. 2013 May 6;210(5):875-90.


Altered Ig levels and antibody responses in mice deficient for the Fc receptor for IgM (FcμR).

Honjo K, Kubagawa Y, Jones DM, Dizon B, Zhu Z, Ohno H, Izui S, Kearney JF, Kubagawa H.

Proc Natl Acad Sci U S A. 2012 Sep 25;109(39):15882-7. Epub 2012 Sep 10.


Antibodies generated against conserved antigens expressed by bacteria and allergen-bearing fungi suppress airway disease.

Kin NW, Stefanov EK, Dizon BL, Kearney JF.

J Immunol. 2012 Sep 1;189(5):2246-56. doi: 10.4049/jimmunol.1200702. Epub 2012 Jul 25.


Imputation of genotypes from low- to high-density genotyping platforms and implications for genomic selection.

Berry DP, Kearney JF.

Animal. 2011 Jun;5(8):1162-9. doi: 10.1017/S1751731111000309.


Long-term maintenance of polysaccharide-specific antibodies by IgM-secreting cells.

Foote JB, Mahmoud TI, Vale AM, Kearney JF.

J Immunol. 2012 Jan 1;188(1):57-67. doi: 10.4049/jimmunol.1100783. Epub 2011 Nov 23.


Cathelin-related antimicrobial peptide differentially regulates T- and B-cell function.

Kin NW, Chen Y, Stefanov EK, Gallo RL, Kearney JF.

Eur J Immunol. 2011 Oct;41(10):3006-16. doi: 10.1002/eji.201141606. Epub 2011 Aug 31.


Limiting CDR-H3 diversity abrogates the antibody response to the bacterial polysaccharide α 1→3 dextran.

Mahmoud TI, Schroeder HW Jr, Kearney JF.

J Immunol. 2011 Jul 15;187(2):879-86. doi: 10.4049/jimmunol.1100957. Epub 2011 Jun 15.


Marginal zone B cells regulate antigen capture by marginal zone macrophages.

You Y, Myers RC, Freeberg L, Foote J, Kearney JF, Justement LB, Carter RH.

J Immunol. 2011 Feb 15;186(4):2172-81. doi: 10.4049/jimmunol.1002106. Epub 2011 Jan 21.


Evidence of genetic and maternal effects on secondary sex ratio in cattle.

Berry DP, Kearney JF, Roche JR.

Theriogenology. 2011 Apr 1;75(6):1039-44. doi: 10.1016/j.theriogenology.2010.11.011. Epub 2010 Dec 31.


ExsB, an unusually highly phosphorylated protein required for the stable attachment of the exosporium of Bacillus anthracis.

McPherson SA, Li M, Kearney JF, Turnbough CL Jr.

Mol Microbiol. 2010 Jun;76(6):1527-38. doi: 10.1111/j.1365-2958.2010.07182.x. Epub 2010 Apr 23.


Terminal deoxynucleotidyl transferase is required for an optimal response to the polysaccharide α-1,3 dextran.

Mahmoud TI, Kearney JF.

J Immunol. 2010 Jan 15;184(2):851-8. doi: 10.4049/jimmunol.0902791. Epub 2009 Dec 16.


PI3 kinase signals BCR-dependent mature B cell survival.

Srinivasan L, Sasaki Y, Calado DP, Zhang B, Paik JH, DePinho RA, Kutok JL, Kearney JF, Otipoby KL, Rajewsky K.

Cell. 2009 Oct 30;139(3):573-86. doi: 10.1016/j.cell.2009.08.041.


Short communication: genetic relationships between the Holstein cow populations of three European dairy countries.

Mrode R, Kearney JF, Biffani S, Coffey M, Canavesi F.

J Dairy Sci. 2009 Nov;92(11):5760-4. doi: 10.3168/jds.2008-1931.


Generation of B cell memory to the bacterial polysaccharide alpha-1,3 dextran.

Foote JB, Kearney JF.

J Immunol. 2009 Nov 15;183(10):6359-68. doi: 10.4049/jimmunol.0902473. Epub 2009 Oct 19.


CD14-Mac-1 interactions in Bacillus anthracis spore internalization by macrophages.

Oliva C, Turnbough CL Jr, Kearney JF.

Proc Natl Acad Sci U S A. 2009 Aug 18;106(33):13957-62. doi: 10.1073/pnas.0902392106. Epub 2009 Jul 28.


Consequences of selection for improving production traits on the frequency of deleterious alleles for fitness.

Kearney JF, Navarro P, Haley CS, Villanueva B.

J Anim Sci. 2009 Mar;87(3):850-9. doi: 10.2527/jas.2008-1099. Epub 2008 Nov 7.


Cathelicidin administration protects mice from Bacillus anthracis spore challenge.

Lisanby MW, Swiecki MK, Dizon BL, Pflughoeft KJ, Koehler TM, Kearney JF.

J Immunol. 2008 Oct 1;181(7):4989-5000.


PIR-B-deficient mice are susceptible to Salmonella infection.

Torii I, Oka S, Hotomi M, Benjamin WH Jr, Takai T, Kearney JF, Briles DE, Kubagawa H.

J Immunol. 2008 Sep 15;181(6):4229-39.


Inbreeding effects on postweaning production traits, conformation, and calving performance in Irish beef cattle.

McParland S, Kearney JF, MacHugh DE, Berry DP.

J Anim Sci. 2008 Dec;86(12):3338-47. doi: 10.2527/jas.2007-0751. Epub 2008 Aug 1.


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