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Items: 1 to 50 of 215

1.

Author Correction: Leveraging European infrastructures to access 1 million human genomes by 2022.

Saunders G, Baudis M, Becker R, Beltran S, Béroud C, Birney E, Brooksbank C, Brunak S, Van den Bulcke M, Drysdale R, Capella-Gutierrez S, Flicek P, Florindi F, Goodhand P, Gut I, Heringa J, Holub P, Hooyberghs J, Juty N, Keane TM, Korbel JO, Lappalainen I, Leskosek B, Matthijs G, Mayrhofer MT, Metspalu A, Navarro A, Newhouse S, Nyrönen T, Page A, Persson B, Palotie A, Parkinson H, Rambla J, Salgado D, Steinfelder E, Swertz MA, Valencia A, Varma S, Blomberg N, Scollen S.

Nat Rev Genet. 2019 Sep 13. doi: 10.1038/s41576-019-0178-3. [Epub ahead of print]

PMID:
31520075
2.

Leveraging European infrastructures to access 1 million human genomes by 2022.

Saunders G, Baudis M, Becker R, Beltran S, Béroud C, Birney E, Brooksbank C, Brunak S, Van den Bulcke M, Drysdale R, Capella-Gutierrez S, Flicek P, Florindi F, Goodhand P, Gut I, Heringa J, Holub P, Hooyberghs J, Juty N, Keane TM, Korbel JO, Lappalainen I, Leskosek B, Matthijs G, Mayrhofer MT, Metspalu A, Navarro A, Newhouse S, Nyrönen T, Page A, Persson B, Palotie A, Parkinson H, Rambla J, Salgado D, Steinfelder E, Swertz MA, Valencia A, Varma S, Blomberg N, Scollen S.

Nat Rev Genet. 2019 Aug 27. doi: 10.1038/s41576-019-0156-9. [Epub ahead of print] Review. Erratum in: Nat Rev Genet. 2019 Sep 13;:.

PMID:
31455890
3.

Developing an optimal short-form of the PTSD Checklist for DSM-5 (PCL-5).

Zuromski KL, Ustun B, Hwang I, Keane TM, Marx BP, Stein MB, Ursano RJ, Kessler RC.

Depress Anxiety. 2019 Sep;36(9):790-800. doi: 10.1002/da.22942. Epub 2019 Jul 29.

PMID:
31356709
4.

The Impact of Assessment Modality and Demographic Characteristics on Endorsement of Military Sexual Trauma.

Bovin MJ, Black SK, Kleiman SE, Brown ME, Brown LG, Street AE, Rosen RC, Keane TM, Marx BP.

Womens Health Issues. 2019 Jun 25;29 Suppl 1:S67-S73. doi: 10.1016/j.whi.2019.03.005.

PMID:
31253245
5.

Repeated ketamine infusions for antidepressant-resistant PTSD: Methods of a multicenter, randomized, placebo-controlled clinical trial.

Abdallah CG, Roache JD, Averill LA, Young-McCaughan S, Martini B, Gueorguieva R, Amoroso T, Southwick SM, Guthmiller K, López-Roca AL, Lautenschlager K, Mintz J, Litz BT, Williamson DE, Keane TM, Peterson AL, Krystal JH; Consortium to Alleviate PTSD.

Contemp Clin Trials. 2019 Jun;81:11-18. doi: 10.1016/j.cct.2019.04.009. Epub 2019 Apr 15.

PMID:
30999057
6.

Suicidal thoughts and behaviors are associated with an increased decision-making bias for active responses to escape aversive states.

Millner AJ, den Ouden HEM, Gershman SJ, Glenn CR, Kearns JC, Bornstein AM, Marx BP, Keane TM, Nock MK.

J Abnorm Psychol. 2019 Feb;128(2):106-118. doi: 10.1037/abn0000395. Epub 2018 Dec 27.

PMID:
30589305
7.

PTSD symptoms are differentially associated with general distress and physiological arousal: Implications for the conceptualization and measurement of PTSD.

Marshall GN, Jaycox LH, Engel CC, Richardson AS, Dutra SJ, Keane TM, Rosen RC, Marx BP.

J Anxiety Disord. 2019 Mar;62:26-34. doi: 10.1016/j.janxdis.2018.10.003. Epub 2018 Oct 29.

PMID:
30496918
8.

Chromosome assembly of large and complex genomes using multiple references.

Kolmogorov M, Armstrong J, Raney BJ, Streeter I, Dunn M, Yang F, Odom D, Flicek P, Keane TM, Thybert D, Paten B, Pham S.

Genome Res. 2018 Nov;28(11):1720-1732. doi: 10.1101/gr.236273.118. Epub 2018 Oct 19.

9.

Evaluating the Effectiveness of Safety Plans for Military Veterans: Do Safety Plans Tailored to Veteran Characteristics Decrease Suicide Risk?

Green JD, Kearns JC, Rosen RC, Keane TM, Marx BP.

Behav Ther. 2018 Nov;49(6):931-938. doi: 10.1016/j.beth.2017.11.005. Epub 2017 Nov 22.

PMID:
30316491
10.

Psychometric properties of a brief measure of posttraumatic stress disorder-related impairment: The Brief Inventory of Psychosocial Functioning.

Kleiman SE, Bovin MJ, Black SK, Rodriguez P, Brown LG, Brown ME, Lunney CA, Weathers FW, Schnurr PP, Spira J, Keane TM, Marx BP.

Psychol Serv. 2018 Oct 8. doi: 10.1037/ser0000306. [Epub ahead of print]

PMID:
30299150
11.

Sixteen diverse laboratory mouse reference genomes define strain-specific haplotypes and novel functional loci.

Lilue J, Doran AG, Fiddes IT, Abrudan M, Armstrong J, Bennett R, Chow W, Collins J, Collins S, Czechanski A, Danecek P, Diekhans M, Dolle DD, Dunn M, Durbin R, Earl D, Ferguson-Smith A, Flicek P, Flint J, Frankish A, Fu B, Gerstein M, Gilbert J, Goodstadt L, Harrow J, Howe K, Ibarra-Soria X, Kolmogorov M, Lelliott CJ, Logan DW, Loveland J, Mathews CE, Mott R, Muir P, Nachtweide S, Navarro FCP, Odom DT, Park N, Pelan S, Pham SK, Quail M, Reinholdt L, Romoth L, Shirley L, Sisu C, Sjoberg-Herrera M, Stanke M, Steward C, Thomas M, Threadgold G, Thybert D, Torrance J, Wong K, Wood J, Yalcin B, Yang F, Adams DJ, Paten B, Keane TM.

Nat Genet. 2018 Nov;50(11):1574-1583. doi: 10.1038/s41588-018-0223-8. Epub 2018 Oct 1.

12.

Common Data Elements in the Assessment of Military-Related PTSD Research Applied in the Consortium to Alleviate PTSD.

Ben Barnes J, Presseau C, Jordan AH, Kline NK, Young-McCaughan S, Keane TM, Peterson AL, Litz BT; the Consortium to Alleviate PTSD.

Mil Med. 2019 May 1;184(5-6):e218-e226. doi: 10.1093/milmed/usy226.

PMID:
30252077
13.

Doxazosin for the treatment of co-occurring PTSD and alcohol use disorder: Design and methodology of a randomized controlled trial in military veterans.

Back SE, Flanagan JC, Jones JL, Augur I, Peterson AL, Young-McCaughan S, Shirley DW, Henschel A, Joseph JE, Litz BT, Hancock AK, Roache JD, Mintz J, Wachen JS, Keane TM, Brady KT; Consortium to Alleviate PTSD.

Contemp Clin Trials. 2018 Oct;73:8-15. doi: 10.1016/j.cct.2018.08.009. Epub 2018 Aug 24.

14.

Latent factor structure of DSM-5 posttraumatic stress disorder: Evaluation of method variance and construct validity of novel symptom clusters.

Lee DJ, Bovin MJ, Weathers FW, Palmieri PA, Schnurr PP, Sloan DM, Keane TM, Marx BP.

Psychol Assess. 2019 Jan;31(1):46-58. doi: 10.1037/pas0000642. Epub 2018 Aug 16.

PMID:
30113182
15.

Examination of posttraumatic stress disorder symptom networks using clinician-rated and patient-rated data.

Moshier SJ, Bovin MJ, Gay NG, Wisco BE, Mitchell KS, Lee DJ, Sloan DM, Weathers FW, Schnurr PP, Keane TM, Marx BP.

J Abnorm Psychol. 2018 Aug;127(6):541-547. doi: 10.1037/abn0000368.

PMID:
30102064
16.

Intensive prolonged exposure therapy for combat-related posttraumatic stress disorder: Design and methodology of a randomized clinical trial.

Peterson AL, Foa EB, Blount TH, McLean CP, Shah DV, Young-McCaughan S, Litz BT, Schobitz RP, Castillo DT, Rentz TO, Yarvis JS, Dondanville KA, Fina BA, Hall-Clark BN, Brown LA, DeBeer BR, Jacoby VM, Hancock AK, Williamson DE, Evans WR, Synett S, Straud C, Hansen HR, Meyer EC, Javors MA, Sharrieff AM, Lara-Ruiz J, Koch LM, Roache JD, Mintz J, Keane TM; Consortium to Alleviate PTSD.

Contemp Clin Trials. 2018 Sep;72:126-136. doi: 10.1016/j.cct.2018.07.016. Epub 2018 Jul 25.

PMID:
30055335
17.

A Requirement for Zic2 in the Regulation of Nodal Expression Underlies the Establishment of Left-Sided Identity.

Dykes IM, Szumska D, Kuncheria L, Puliyadi R, Chen CM, Papanayotou C, Lockstone H, Dubourg C, David V, Schneider JE, Keane TM, Adams DJ, Brown SDM, Mercier S, Odent S, Collignon J, Bhattacharya S.

Sci Rep. 2018 Jul 11;8(1):10439. doi: 10.1038/s41598-018-28714-1.

18.

htsget: a protocol for securely streaming genomic data.

Kelleher J, Lin M, Albach CH, Birney E, Davies R, Gourtovaia M, Glazer D, Gonzalez CY, Jackson DK, Kemp A, Marshall J, Nowak A, Senf A, Tovar-Corona JM, Vikhorev A, Keane TM; GA4GH Streaming Task Team.

Bioinformatics. 2019 Jan 1;35(1):119-121. doi: 10.1093/bioinformatics/bty492.

19.

Publisher Correction: Mutations in Vps15 perturb neuronal migration in mice and are associated with neurodevelopmental disease in humans.

Gstrein T, Edwards A, Přistoupilová A, Leca I, Breuss M, Pilat-Carotta S, Hansen AH, Tripathy R, Traunbauer AK, Hochstoeger T, Rosoklija G, Repic M, Landler L, Stránecký V, Dürnberger G, Keane TM, Zuber J, Adams DJ, Flint J, Honzik T, Gut M, Beltran S, Mechtler K, Sherr E, Kmoch S, Gut I, Keays DA.

Nat Neurosci. 2018 Aug;21(8):1139. doi: 10.1038/s41593-018-0170-9.

PMID:
29875394
20.

Development and validation of a measure of PTSD-related psychosocial functional impairment: The Inventory of Psychosocial Functioning.

Bovin MJ, Black SK, Rodriguez P, Lunney CA, Kleiman SE, Weathers FW, Schnurr PP, Spira J, Keane TM, Marx BP.

Psychol Serv. 2018 May;15(2):216-229. doi: 10.1037/ser0000220.

PMID:
29723024
21.

A longitudinal study of risk factors for suicide attempts among Operation Enduring Freedom and Operation Iraqi Freedom veterans.

Lee DJ, Kearns JC, Wisco BE, Green JD, Gradus JL, Sloan DM, Nock MK, Rosen RC, Keane TM, Marx BP.

Depress Anxiety. 2018 Jul;35(7):609-618. doi: 10.1002/da.22736. Epub 2018 Apr 10.

PMID:
29637667
22.

Repeat associated mechanisms of genome evolution and function revealed by the Mus caroli and Mus pahari genomes.

Thybert D, Roller M, Navarro FCP, Fiddes I, Streeter I, Feig C, Martin-Galvez D, Kolmogorov M, Janoušek V, Akanni W, Aken B, Aldridge S, Chakrapani V, Chow W, Clarke L, Cummins C, Doran A, Dunn M, Goodstadt L, Howe K, Howell M, Josselin AA, Karn RC, Laukaitis CM, Jingtao L, Martin F, Muffato M, Nachtweide S, Quail MA, Sisu C, Stanke M, Stefflova K, Van Oosterhout C, Veyrunes F, Ward B, Yang F, Yazdanifar G, Zadissa A, Adams DJ, Brazma A, Gerstein M, Paten B, Pham S, Keane TM, Odom DT, Flicek P.

Genome Res. 2018 Apr;28(4):448-459. doi: 10.1101/gr.234096.117. Epub 2018 Mar 21.

23.

Mutations in Vps15 perturb neuronal migration in mice and are associated with neurodevelopmental disease in humans.

Gstrein T, Edwards A, Přistoupilová A, Leca I, Breuss M, Pilat-Carotta S, Hansen AH, Tripathy R, Traunbauer AK, Hochstoeger T, Rosoklija G, Repic M, Landler L, Stránecký V, Dürnberger G, Keane TM, Zuber J, Adams DJ, Flint J, Honzik T, Gut M, Beltran S, Mechtler K, Sherr E, Kmoch S, Gut I, Keays DA.

Nat Neurosci. 2018 Feb;21(2):207-217. doi: 10.1038/s41593-017-0053-5. Epub 2018 Jan 8. Erratum in: Nat Neurosci. 2018 Aug;21(8):1139.

24.

The Influence of Exposure to Natural Disasters on Depression and PTSD Symptoms among Firefighters.

Pennington ML, Carpenter TP, Synett SJ, Torres VA, Teague J, Morissette SB, Knight J, Kamholz BW, Keane TM, Zimering RT, Gulliver SB.

Prehosp Disaster Med. 2018 Feb;33(1):102-108. doi: 10.1017/S1049023X17007026. Epub 2017 Dec 10.

PMID:
29223176
25.

Design of a randomized controlled trial examining the efficacy and biological mechanisms of web-prolonged exposure and present-centered therapy for PTSD among active-duty military personnel and veterans.

McLean CP, Rauch SAM, Foa EB, Sripada RK, Tannahill HS, Mintz J, Yarvis J, Young-McCaughan S, Dondanville KA, Hall-Clark BN, Fina BA, Keane TM, Peterson AL; STRONG STAR Consortium and the Consortium to Alleviate PTSD.

Contemp Clin Trials. 2018 Jan;64:41-48. doi: 10.1016/j.cct.2017.11.008. Epub 2017 Nov 8.

PMID:
29128649
26.

Proteomic Characterization of Armillaria mellea Reveals Oxidative Stress Response Mechanisms and Altered Secondary Metabolism Profiles.

Collins C, Hurley R, Almutlaqah N, O'Keeffe G, Keane TM, Fitzpatrick DA, Owens RA.

Microorganisms. 2017 Sep 17;5(3). pii: E60. doi: 10.3390/microorganisms5030060.

27.

Mental Disorder Symptoms among Public Safety Personnel in Canada.

Carleton RN, Afifi TO, Turner S, Taillieu T, Duranceau S, LeBouthillier DM, Sareen J, Ricciardelli R, MacPhee RS, Groll D, Hozempa K, Brunet A, Weekes JR, Griffiths CT, Abrams KJ, Jones NA, Beshai S, Cramm HA, Dobson KS, Hatcher S, Keane TM, Stewart SH, Asmundson GJG.

Can J Psychiatry. 2018 Jan;63(1):54-64. doi: 10.1177/0706743717723825. Epub 2017 Aug 28.

28.

Examining the diagnostic utility of the DSM-5 PTSD symptoms among male and female returning veterans.

Green JD, Annunziata A, Kleiman SE, Bovin MJ, Harwell AM, Fox AML, Black SK, Schnurr PP, Holowka DW, Rosen RC, Keane TM, Marx BP.

Depress Anxiety. 2017 Aug;34(8):752-760. doi: 10.1002/da.22667. Epub 2017 Aug 1.

PMID:
28763159
29.

De novo yeast genome assemblies from MinION, PacBio and MiSeq platforms.

Giordano F, Aigrain L, Quail MA, Coupland P, Bonfield JK, Davies RM, Tischler G, Jackson DK, Keane TM, Li J, Yue JX, Liti G, Durbin R, Ning Z.

Sci Rep. 2017 Jun 21;7(1):3935. doi: 10.1038/s41598-017-03996-z.

30.

The influence of veteran race and psychometric testing on veterans affairs posttraumatic stress disorder (PTSD) disability exam outcomes.

Marx BP, Engel-Rebitzer E, Bovin MJ, Parker-Guilbert KS, Moshier S, Barretto K, Szafranski D, Gallagher MW, Holowka DW, Rosen RC, Keane TM.

Psychol Assess. 2017 Jun;29(6):710-719. doi: 10.1037/pas0000378.

PMID:
28594214
31.

Structural Variation Shapes the Landscape of Recombination in Mouse.

Morgan AP, Gatti DM, Najarian ML, Keane TM, Galante RJ, Pack AI, Mott R, Churchill GA, de Villena FP.

Genetics. 2017 Jun;206(2):603-619. doi: 10.1534/genetics.116.197988.

32.

Web-based alcohol intervention for veterans: PTSD, combat exposure, and alcohol outcomes.

Brief DJ, Solhan M, Rybin D, Enggasser JL, Rubin A, Roy M, Helmuth E, Schreiner A, Heilman M, Vittorio L, Rosenbloom D, Keane TM.

Psychol Trauma. 2018 Mar;10(2):154-162. doi: 10.1037/tra0000281. Epub 2017 Jun 1.

33.

The Clinician-Administered PTSD Scale for DSM-5 (CAPS-5): Development and initial psychometric evaluation in military veterans.

Weathers FW, Bovin MJ, Lee DJ, Sloan DM, Schnurr PP, Kaloupek DG, Keane TM, Marx BP.

Psychol Assess. 2018 Mar;30(3):383-395. doi: 10.1037/pas0000486. Epub 2017 May 11.

34.

Variation in olfactory neuron repertoires is genetically controlled and environmentally modulated.

Ibarra-Soria X, Nakahara TS, Lilue J, Jiang Y, Trimmer C, Souza MA, Netto PH, Ikegami K, Murphy NR, Kusma M, Kirton A, Saraiva LR, Keane TM, Matsunami H, Mainland J, Papes F, Logan DW.

Elife. 2017 Apr 25;6. pii: e21476. doi: 10.7554/eLife.21476.

35.

Network models of DSM-5 posttraumatic stress disorder: Implications for ICD-11.

Mitchell KS, Wolf EJ, Bovin MJ, Lee LO, Green JD, Rosen RC, Keane TM, Marx BP.

J Abnorm Psychol. 2017 Apr;126(3):355-366. doi: 10.1037/abn0000252. Epub 2017 Feb 13.

36.

Using reference-free compressed data structures to analyze sequencing reads from thousands of human genomes.

Dolle DD, Liu Z, Cotten M, Simpson JT, Iqbal Z, Durbin R, McCarthy SA, Keane TM.

Genome Res. 2017 Feb;27(2):300-309. doi: 10.1101/gr.211748.116. Epub 2016 Dec 16.

37.

A longitudinal examination of peritraumatic emotional responses and their association with posttraumatic stress disorder and major depressive disorder among veterans.

Engel-Rebitzer E, Bovin MJ, Black SK, Rosen RC, Keane TM, Marx BP.

J Trauma Dissociation. 2017 Oct-Dec;18(5):679-692. doi: 10.1080/15299732.2016.1267683. Epub 2016 Dec 5.

PMID:
27918877
38.

Genome-wide genetic screening with chemically mutagenized haploid embryonic stem cells.

Forment JV, Herzog M, Coates J, Konopka T, Gapp BV, Nijman SM, Adams DJ, Keane TM, Jackson SP.

Nat Chem Biol. 2017 Jan;13(1):12-14. doi: 10.1038/nchembio.2226. Epub 2016 Oct 31.

39.

Psychometric properties of the PTSD Checklist for Diagnostic and Statistical Manual of Mental Disorders-Fifth Edition (PCL-5) in veterans.

Bovin MJ, Marx BP, Weathers FW, Gallagher MW, Rodriguez P, Schnurr PP, Keane TM.

Psychol Assess. 2016 Nov;28(11):1379-1391. doi: 10.1037/pas0000254. Epub 2015 Dec 14.

PMID:
26653052
40.

Whole Genome Sequence of Two Wild-Derived Mus musculus domesticus Inbred Strains, LEWES/EiJ and ZALENDE/EiJ, with Different Diploid Numbers.

Morgan AP, Didion JP, Doran AG, Holt JM, McMillan L, Keane TM, de Villena FP.

G3 (Bethesda). 2016 Dec 7;6(12):4211-4216. doi: 10.1534/g3.116.034751.

41.

Deep genome sequencing and variation analysis of 13 inbred mouse strains defines candidate phenotypic alleles, private variation and homozygous truncating mutations.

Doran AG, Wong K, Flint J, Adams DJ, Hunter KW, Keane TM.

Genome Biol. 2016 Aug 1;17(1):167. doi: 10.1186/s13059-016-1024-y.

42.

Mild Traumatic Brain Injury, PTSD, and Psychosocial Functioning Among Male and Female U.S. OEF/OIF Veterans.

Jackson CE, Green JD, Bovin MJ, Vasterling JJ, Holowka DW, Ranganathan G, Rosen RC, Keane TM, Marx BP.

J Trauma Stress. 2016 Aug;29(4):309-16. doi: 10.1002/jts.22110. Epub 2016 Jul 12.

PMID:
27405050
43.

Sexual Health in Male and Female Iraq and Afghanistan U. S. War Veterans With and Without PTSD: Findings From the VALOR Cohort.

Breyer BN, Fang SC, Seal KH, Ranganathan G, Marx BP, Keane TM, Rosen RC.

J Trauma Stress. 2016 Jun;29(3):229-36. doi: 10.1002/jts.22097. Epub 2016 Apr 29.

44.

The impact of proposed changes to ICD-11 on estimates of PTSD prevalence and comorbidity.

Wisco BE, Miller MW, Wolf EJ, Kilpatrick D, Resnick HS, Badour CL, Marx BP, Keane TM, Rosen RC, Friedman MJ.

Psychiatry Res. 2016 Jun 30;240:226-233. doi: 10.1016/j.psychres.2016.04.043. Epub 2016 Apr 16.

45.

Longitudinal associations between post-traumatic stress disorder and metabolic syndrome severity.

Wolf EJ, Bovin MJ, Green JD, Mitchell KS, Stoop TB, Barretto KM, Jackson CE, Lee LO, Fang SC, Trachtenberg F, Rosen RC, Keane TM, Marx BP.

Psychol Med. 2016 Jul;46(10):2215-26. doi: 10.1017/S0033291716000817. Epub 2016 Apr 18.

46.

Erratum to: Advantages and psychometric validation of proximal intensive assessments of patient-reported outcomes collected in daily life.

Carlson EB, Field NP, Ruzek JI, Bryant RA, Dalenberg CJ, Keane TM, Spain DA.

Qual Life Res. 2016 Sep;25(9):2399. No abstract available.

PMID:
27060089
47.

Group-delivered cognitive/exposure therapy for PTSD in women veterans: A randomized controlled trial.

Castillo DT, Chee CL, Nason E, Keller J, C'de Baca J, Qualls C, Fallon SK, Haaland KY, Miller MW, Keane TM.

Psychol Trauma. 2016 May;8(3):404-412. doi: 10.1037/tra0000111. Epub 2016 Feb 8.

PMID:
26854355
48.

Validity of posttraumatic stress disorder service connection status in Veterans Affairs electronic records of Iraq and Afghanistan Veterans.

Marx BP, Bovin MJ, Szafranski DD, Engel-Rebitzer E, Gallagher MW, Holowka DW, Schnurr PP, Rosen RC, Keane TM.

J Clin Psychiatry. 2016 Apr;77(4):517-22. doi: 10.4088/JCP.14m09666.

PMID:
26797388
49.

Positive Adjustment Among American Repatriated Prisoners of the Vietnam War: Modeling the Long-Term Effects of Captivity.

King DW, King LA, Park CL, Lee LO, Kaiser AP, Spiro A 3rd, Moore JL, Kaloupek DG, Keane TM.

Clin Psychol Sci. 2015 Nov 1;3(6):861-876. Epub 2014 Dec 5.

50.

The effect of enemy combat tactics on PTSD prevalence rates: A comparison of Operation Iraqi Freedom deployment phases in a sample of male and female veterans.

Green JD, Bovin MJ, Erb SE, Lachowicz M, Gorman KR, Rosen RC, Keane TM, Marx BP.

Psychol Trauma. 2016 Sep;8(5):634-40. doi: 10.1037/tra0000086. Epub 2015 Dec 14.

PMID:
26654686

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