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Ubiquity or not ubiquity: That is the question.

Sleith RS, Katz LA.

Mol Ecol. 2019 Nov;28(22):4842-4844. doi: 10.1111/mec.15297.


John Tyler Bonner: Remembering a scientific pioneer.

Brigandt I, Katz LA, Nanjundiah V, Gilbert SF, Grant PR, Grant BR, Love AC, Newman SA, West-Eberhard MJ.

J Exp Zool B Mol Dev Evol. 2019 Dec;332(8):365-370. doi: 10.1002/jez.b.22920. Epub 2019 Nov 19.


The concept of the hologenome, an epigenetic phenomenon, challenges aspects of the modern evolutionary synthesis.

Collens A, Kelley E, Katz LA.

J Exp Zool B Mol Dev Evol. 2019 Dec;332(8):349-355. doi: 10.1002/jez.b.22915. Epub 2019 Nov 11.


Beyond Medication Adherence: The Role of Patients' Beliefs and Life Context in Blood Pressure Control.

Kressin NR, Elwy AR, Glickman M, Orner MB, Fix GM, Borzecki AM, Katz LA, Cortés DE, Cohn ES, Barker A, Bokhour BG.

Ethn Dis. 2019 Oct 17;29(4):567-576. doi: 10.18865/ed.29.4.567. eCollection 2019 Fall.



Katz LA, Eyre-Walker A.

Genome Biol Evol. 2019 Jul 1;11(7):1959. doi: 10.1093/gbe/evz152. No abstract available.


Association of Total Medication Burden With Intensive and Standard Blood Pressure Control and Clinical Outcomes: A Secondary Analysis of SPRINT.

Derington CG, Gums TH, Bress AP, Herrick JS, Greene TH, Moran AE, Weintraub WS, Kronish IM, Morisky DE, Trinkley KE, Saseen JJ, Reynolds K, Bates JT, Berlowitz DR, Chang TI, Chonchol M, Cushman WC, Foy CG, Herring CT, Katz LA, Krousel-Wood M, Pajewski NM, Tamariz L, King JB; SPRINT Research Group.

Hypertension. 2019 Jul 1:HYPERTENSIONAHA11912907. doi: 10.1161/HYPERTENSIONAHA.119.12907. [Epub ahead of print]


PhyloToL: A Taxon/Gene-Rich Phylogenomic Pipeline to Explore Genome Evolution of Diverse Eukaryotes.

Cerón-Romero MA, Maurer-Alcalá XX, Grattepanche JD, Yan Y, Fonseca MM, Katz LA.

Mol Biol Evol. 2019 Aug 1;36(8):1831-1842. doi: 10.1093/molbev/msz103.


Incubation and grazing effects on spirotrich ciliate diversity inferred from molecular analyses of microcosm experiments.

Grattepanche JD, Juarez DL, Wood CC, McManus GB, Katz LA.

PLoS One. 2019 May 6;14(5):e0215872. doi: 10.1371/journal.pone.0215872. eCollection 2019.


Genome analyses of the new model protist Euplotes vannus focusing on genome rearrangement and resistance to environmental stressors.

Chen X, Jiang Y, Gao F, Zheng W, Krock TJ, Stover NA, Lu C, Katz LA, Song W.

Mol Ecol Resour. 2019 Sep;19(5):1292-1308. doi: 10.1111/1755-0998.13023. Epub 2019 Jun 6.


Further analyses of variation of ribosome DNA copy number and polymorphism in ciliates provide insights relevant to studies of both molecular ecology and phylogeny.

Wang Y, Wang C, Jiang Y, Katz LA, Gao F, Yan Y.

Sci China Life Sci. 2019 Feb;62(2):203-214. doi: 10.1007/s11427-018-9422-5. Epub 2019 Jan 21.


Durability and Decay of Treatment Benefit of Cognitive Behavioral Therapy for Irritable Bowel Syndrome: 12-Month Follow-Up.

Lackner JM, Jaccard J, Radziwon CD, Firth RS, Gudleski GD, Hamilton F, Katz LA, Keefer L, Krasner SS, Ma CX, Sitrin MD, Brenner DM.

Am J Gastroenterol. 2019 Feb;114(2):330-338. doi: 10.1038/s41395-018-0396-x.


A paradox: rapid evolution rates of germline-limited sequences are associated with conserved patterns of rearrangements in cryptic species of Chilodonella uncinata (Protista, Ciliophora).

Zhang T, Wang C, Katz LA, Gao F.

Sci China Life Sci. 2018 Sep;61(9):1071-1078. doi: 10.1007/s11427-018-9333-1. Epub 2018 Jul 19.


Twisted Tales: Insights into Genome Diversity of Ciliates Using Single-Cell 'Omics.

Maurer-Alcalá XX, Yan Y, Pilling OA, Knight R, Katz LA.

Genome Biol Evol. 2018 Aug 1;10(8):1927-1939. doi: 10.1093/gbe/evy133.


Improvement in Gastrointestinal Symptoms After Cognitive Behavior Therapy for Refractory Irritable Bowel Syndrome.

Lackner JM, Jaccard J, Keefer L, Brenner DM, Firth RS, Gudleski GD, Hamilton FA, Katz LA, Krasner SS, Ma CX, Radziwon CD, Sitrin MD.

Gastroenterology. 2018 Jul;155(1):47-57. doi: 10.1053/j.gastro.2018.03.063. Epub 2018 Apr 25. Erratum in: Gastroenterology. 2018 Oct;155(4):1281.


Microbial Diversity in the Eukaryotic SAR Clade: Illuminating the Darkness Between Morphology and Molecular Data.

Grattepanche JD, Walker LM, Ott BM, Paim Pinto DL, Delwiche CF, Lane CE, Katz LA.

Bioessays. 2018 Apr;40(4):e1700198. doi: 10.1002/bies.201700198. Epub 2018 Mar 7.


PhyloChromoMap, a Tool for Mapping Phylogenomic History along Chromosomes, Reveals the Dynamic Nature of Karyotype Evolution in Plasmodium falciparum.

Cerón-Romero MA, Nwaka E, Owoade Z, Katz LA.

Genome Biol Evol. 2018 Feb 1;10(2):553-561. doi: 10.1093/gbe/evy017.


Exploration of the Germline Genome of the Ciliate Chilodonella uncinata through Single-Cell Omics (Transcriptomics and Genomics).

Maurer-Alcalá XX, Knight R, Katz LA.

MBio. 2018 Jan 9;9(1). pii: e01836-17. doi: 10.1128/mBio.01836-17.


Distribution of Abundant and Active Planktonic Ciliates in Coastal and Slope Waters Off New England.

Tucker SJ, McManus GB, Katz LA, Grattepanche JD.

Front Microbiol. 2017 Nov 14;8:2178. doi: 10.3389/fmicb.2017.02178. eCollection 2017.


Effects of Intensive Blood Pressure Treatment on Acute Kidney Injury Events in the Systolic Blood Pressure Intervention Trial (SPRINT).

Rocco MV, Sink KM, Lovato LC, Wolfgram DF, Wiegmann TB, Wall BM, Umanath K, Rahbari-Oskoui F, Porter AC, Pisoni R, Lewis CE, Lewis JB, Lash JP, Katz LA, Hawfield AT, Haley WE, Freedman BI, Dwyer JP, Drawz PE, Dobre M, Cheung AK, Campbell RC, Bhatt U, Beddhu S, Kimmel PL, Reboussin DM, Chertow GM; SPRINT Research Group.

Am J Kidney Dis. 2018 Mar;71(3):352-361. doi: 10.1053/j.ajkd.2017.08.021. Epub 2017 Nov 20.


Disentangling sources of variation in SSU rDNA sequences from single cell analyses of ciliates: impact of copy number variation and experimental error.

Wang C, Zhang T, Wang Y, Katz LA, Gao F, Song W.

Proc Biol Sci. 2017 Jul 26;284(1859). pii: 20170425. doi: 10.1098/rspb.2017.0425.


Insights into transgenerational epigenetics from studies of ciliates.

Pilling OA, Rogers AJ, Gulla-Devaney B, Katz LA.

Eur J Protistol. 2017 Oct;61(Pt B):366-375. doi: 10.1016/j.ejop.2017.05.004. Epub 2017 May 16. Review.


Unusual features of non-dividing somatic macronuclei in the ciliate class Karyorelictea.

Yan Y, Rogers AJ, Gao F, Katz LA.

Eur J Protistol. 2017 Oct;61(Pt B):399-408. doi: 10.1016/j.ejop.2017.05.002. Epub 2017 May 22. Review.


Effects of Intensive BP Control in CKD.

Cheung AK, Rahman M, Reboussin DM, Craven TE, Greene T, Kimmel PL, Cushman WC, Hawfield AT, Johnson KC, Lewis CE, Oparil S, Rocco MV, Sink KM, Whelton PK, Wright JT Jr, Basile J, Beddhu S, Bhatt U, Chang TI, Chertow GM, Chonchol M, Freedman BI, Haley W, Ix JH, Katz LA, Killeen AA, Papademetriou V, Ricardo AC, Servilla K, Wall B, Wolfgram D, Yee J; SPRINT Research Group.

J Am Soc Nephrol. 2017 Sep;28(9):2812-2823. doi: 10.1681/ASN.2017020148. Epub 2017 Jun 22.


Nuclear Features of the Heterotrich Ciliate Blepharisma americanum: Genomic Amplification, Life Cycle, and Nuclear Inclusion.

Wancura MM, Yan Y, Katz LA, Maurer-Alcalá XX.

J Eukaryot Microbiol. 2018 Jan;65(1):4-11. doi: 10.1111/jeu.12422. Epub 2017 Jun 7.


A Program Aimed toward Inclusive Excellence for Underrepresented Undergraduate Women in the Sciences.

Katz LA, Aloisio KM, Horton NJ, Ly M, Pruss S, Queeney K, Rowen C, DiBartolo PM.

CBE Life Sci Educ. 2017 Spring;16(1). pii: ar11. doi: 10.1187/cbe.16-01-0029.


Amoebozoans Are Secretly but Ancestrally Sexual: Evidence for Sex Genes and Potential Novel Crossover Pathways in Diverse Groups of Amoebae.

Tekle YI, Wood FC, Katz LA, Cerón-Romero MA, Gorfu LA.

Genome Biol Evol. 2017 Feb 1;9(2):375-387. doi: 10.1093/gbe/evx002.


Patchiness of Ciliate Communities Sampled at Varying Spatial Scales along the New England Shelf.

Grattepanche JD, McManus GB, Katz LA.

PLoS One. 2016 Dec 9;11(12):e0167659. doi: 10.1371/journal.pone.0167659. eCollection 2016.


Unexpected biodiversity of ciliates in marine samples from below the photic zone.

Grattepanche JD, Santoferrara LF, McManus GB, Katz LA.

Mol Ecol. 2016 Aug;25(16):3987-4000. doi: 10.1111/mec.13745. Epub 2016 Aug 6.


Nuclear Architecture and Patterns of Molecular Evolution Are Correlated in the Ciliate Chilodonella uncinata.

Maurer-Alcalá XX, Katz LA.

Genome Biol Evol. 2016 Jun 8;8(6):1634-42. doi: 10.1093/gbe/evw099.


Assessing the effects of a sequestered germline on interdomain lateral gene transfer in Metazoa.

Jensen L, Grant JR, Laughinghouse HD 4th, Katz LA.

Evolution. 2016 Jun;70(6):1322-33. doi: 10.1111/evo.12935. Epub 2016 May 30.


Are microbes fundamentally different than macroorganisms? Convergence and a possible case for neutral phenotypic evolution in testate amoeba (Amoebozoa: Arcellinida).

Oliverio AM, Lahr DJ, Grant J, Katz LA.

R Soc Open Sci. 2015 Dec 16;2(12):150414. doi: 10.1098/rsos.150414. eCollection 2015 Dec.


Phylogenomics of 'Discosea': A new molecular phylogenetic perspective on Amoebozoa with flat body forms.

Tekle YI, Anderson OR, Katz LA, Maurer-Alcalá XX, Romero MAC, Molestina R.

Mol Phylogenet Evol. 2016 Jun;99:144-154. doi: 10.1016/j.ympev.2016.03.029. Epub 2016 Mar 22.


Patterns and processes in microbial biogeography: do molecules and morphologies give the same answers?

Santoferrara LF, Grattepanche JD, Katz LA, McManus GB.

ISME J. 2016 Jul;10(7):1779-90. doi: 10.1038/ismej.2015.224. Epub 2016 Feb 5.


An epigenetic toolkit allows for diverse genome architectures in eukaryotes.

Maurer-Alcalá XX, Katz LA.

Curr Opin Genet Dev. 2015 Dec;35:93-9. doi: 10.1016/j.gde.2015.10.005. Epub 2015 Nov 30. Review.


Synthesis of phylogeny and taxonomy into a comprehensive tree of life.

Hinchliff CE, Smith SA, Allman JF, Burleigh JG, Chaudhary R, Coghill LM, Crandall KA, Deng J, Drew BT, Gazis R, Gude K, Hibbett DS, Katz LA, Laughinghouse HD 4th, McTavish EJ, Midford PE, Owen CL, Ree RH, Rees JA, Soltis DE, Williams T, Cranston KA.

Proc Natl Acad Sci U S A. 2015 Oct 13;112(41):12764-9. doi: 10.1073/pnas.1423041112. Epub 2015 Sep 18.


Hazard of Low Salt Intake.

Katz LA.

Am J Hypertens. 2015 Jul;28(7):952. doi: 10.1093/ajh/hpv032. Epub 2015 Mar 20. No abstract available.


Win-win: advancing written language knowledge and practice through university clinics.

Katz LA, Fallon KA.

Semin Speech Lang. 2015 Feb;36(1):42-9. doi: 10.1055/s-0034-1396445. Epub 2015 Jan 29.


Balanced intervention for adolescents and adults with language impairment: a clinical framework.

Fallon KA, Katz LA, Carlberg R.

Semin Speech Lang. 2015 Feb;36(1):5-16. doi: 10.1055/s-0034-1396442. Epub 2015 Jan 29.


Taxon-rich phylogenomic analyses resolve the eukaryotic tree of life and reveal the power of subsampling by sites.

Katz LA, Grant JR.

Syst Biol. 2015 May;64(3):406-15. doi: 10.1093/sysbio/syu126. Epub 2014 Dec 23.


Sapocribrum chincoteaguense n. gen. n. sp.: A Small, Scale-bearing Amoebozoan with Flabellinid Affinities.

Lahr DJ, Grant J, Molestina R, Katz LA, Anderson OR.

J Eukaryot Microbiol. 2015 Jul-Aug;62(4):444-53. doi: 10.1111/jeu.12199. Epub 2015 Jan 6.


How discordant morphological and molecular evolution among microorganisms can revise our notions of biodiversity on Earth.

Lahr DJ, Laughinghouse HD 4th, Oliverio AM, Gao F, Katz LA.

Bioessays. 2014 Oct;36(10):950-9. doi: 10.1002/bies.201400056. Epub 2014 Aug 25. Review.


The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): illuminating the functional diversity of eukaryotic life in the oceans through transcriptome sequencing.

Keeling PJ, Burki F, Wilcox HM, Allam B, Allen EE, Amaral-Zettler LA, Armbrust EV, Archibald JM, Bharti AK, Bell CJ, Beszteri B, Bidle KD, Cameron CT, Campbell L, Caron DA, Cattolico RA, Collier JL, Coyne K, Davy SK, Deschamps P, Dyhrman ST, Edvardsen B, Gates RD, Gobler CJ, Greenwood SJ, Guida SM, Jacobi JL, Jakobsen KS, James ER, Jenkins B, John U, Johnson MD, Juhl AR, Kamp A, Katz LA, Kiene R, Kudryavtsev A, Leander BS, Lin S, Lovejoy C, Lynn D, Marchetti A, McManus G, Nedelcu AM, Menden-Deuer S, Miceli C, Mock T, Montresor M, Moran MA, Murray S, Nadathur G, Nagai S, Ngam PB, Palenik B, Pawlowski J, Petroni G, Piganeau G, Posewitz MC, Rengefors K, Romano G, Rumpho ME, Rynearson T, Schilling KB, Schroeder DC, Simpson AG, Slamovits CH, Smith DR, Smith GJ, Smith SR, Sosik HM, Stief P, Theriot E, Twary SN, Umale PE, Vaulot D, Wawrik B, Wheeler GL, Wilson WH, Xu Y, Zingone A, Worden AZ.

PLoS Biol. 2014 Jun 24;12(6):e1001889. doi: 10.1371/journal.pbio.1001889. eCollection 2014 Jun. No abstract available.


Diversity of diversity: conceptual and methodological differences in biodiversity estimates of eukaryotic microbes as compared to bacteria.

Grattepanche JD, Santoferrara LF, McManus GB, Katz LA.

Trends Microbiol. 2014 Aug;22(8):432-7. doi: 10.1016/j.tim.2014.04.006. Epub 2014 May 9. Review.


Cryptic diversity within morphospecies of testate amoebae (Amoebozoa: Arcellinida) in New England bogs and fens.

Oliverio AM, Lahr DJ, Nguyen T, Katz LA.

Protist. 2014 Mar;165(2):196-207. doi: 10.1016/j.protis.2014.02.001. Epub 2014 Feb 17.


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