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Budding yeast Rif1 binds to replication origins and protects DNA at blocked replication forks.

Hiraga SI, Monerawela C, Katou Y, Shaw S, Clark KR, Shirahige K, Donaldson AD.

EMBO Rep. 2018 Aug 13. pii: e46222. doi: 10.15252/embr.201846222. [Epub ahead of print]


Re-evaluating the Localization of Sperm-Retained Histones Revealed the Modification-Dependent Accumulation in Specific Genome Regions.

Yamaguchi K, Hada M, Fukuda Y, Inoue E, Makino Y, Katou Y, Shirahige K, Okada Y.

Cell Rep. 2018 Jun 26;23(13):3920-3932. doi: 10.1016/j.celrep.2018.05.094.


Cohesin Ubiquitylation and Mobilization Facilitate Stalled Replication Fork Dynamics.

Frattini C, Villa-Hernández S, Pellicanò G, Jossen R, Katou Y, Shirahige K, Bermejo R.

Mol Cell. 2017 Nov 16;68(4):758-772.e4. doi: 10.1016/j.molcel.2017.10.012. Epub 2017 Nov 9.


interleukin-11 induces and maintains progenitors of different cell lineages during Xenopus tadpole tail regeneration.

Tsujioka H, Kunieda T, Katou Y, Shirahige K, Fukazawa T, Kubo T.

Nat Commun. 2017 Sep 8;8(1):495. doi: 10.1038/s41467-017-00594-5.


Anti-tumor activity of KNTC2 siRNA in orthotopic tumor model mice of hepatocellular carcinoma.

Makita Y, Murata S, Katou Y, Kikuchi K, Uejima H, Teratani M, Hoashi Y, Kenjo E, Matsumoto S, Nogami M, Otake K, Kawamata Y.

Biochem Biophys Res Commun. 2017 Nov 4;493(1):800-806. doi: 10.1016/j.bbrc.2017.08.088. Epub 2017 Aug 23.


An In Vitro Human Liver Model by iPSC-Derived Parenchymal and Non-parenchymal Cells.

Koui Y, Kido T, Ito T, Oyama H, Chen SW, Katou Y, Shirahige K, Miyajima A.

Stem Cell Reports. 2017 Aug 8;9(2):490-498. doi: 10.1016/j.stemcr.2017.06.010. Epub 2017 Jul 27.


MRG15-mediated tethering of PALB2 to unperturbed chromatin protects active genes from genotoxic stress.

Bleuyard JY, Fournier M, Nakato R, Couturier AM, Katou Y, Ralf C, Hester SS, Dominguez D, Rhodes D, Humphrey TC, Shirahige K, Esashi F.

Proc Natl Acad Sci U S A. 2017 Jul 18;114(29):7671-7676. doi: 10.1073/pnas.1620208114. Epub 2017 Jul 3.


Decreased cohesin in the brain leads to defective synapse development and anxiety-related behavior.

Fujita Y, Masuda K, Bando M, Nakato R, Katou Y, Tanaka T, Nakayama M, Takao K, Miyakawa T, Tanaka T, Ago Y, Hashimoto H, Shirahige K, Yamashita T.

J Exp Med. 2017 May 1;214(5):1431-1452. doi: 10.1084/jem.20161517. Epub 2017 Apr 13.


ASBEL-TCF3 complex is required for the tumorigenicity of colorectal cancer cells.

Taniue K, Kurimoto A, Takeda Y, Nagashima T, Okada-Hatakeyama M, Katou Y, Shirahige K, Akiyama T.

Proc Natl Acad Sci U S A. 2016 Oct 21. pii: 201605938. [Epub ahead of print]


ARCN1 Mutations Cause a Recognizable Craniofacial Syndrome Due to COPI-Mediated Transport Defects.

Izumi K, Brett M, Nishi E, Drunat S, Tan ES, Fujiki K, Lebon S, Cham B, Masuda K, Arakawa M, Jacquinet A, Yamazumi Y, Chen ST, Verloes A, Okada Y, Katou Y, Nakamura T, Akiyama T, Gressens P, Foo R, Passemard S, Tan EC, El Ghouzzi V, Shirahige K.

Am J Hum Genet. 2016 Aug 4;99(2):451-9. doi: 10.1016/j.ajhg.2016.06.011. Epub 2016 Jul 28.


Design and Synthesis of Structure-Simplified Derivatives of Gonytolide for the Promotion of Innate Immune Responses.

Kikuchi H, Hoshikawa T, Kurata S, Katou Y, Oshima Y.

J Nat Prod. 2016 May 27;79(5):1259-66. doi: 10.1021/acs.jnatprod.5b00829. Epub 2016 Apr 15.


[Difficult Airway Management of a Patient with the Ossification of Anterior Longitudinal Ligament].

Yamada N, Katou Y, Kimura O, Matsui H.

Masui. 2015 Apr;64(4):392-5. Japanese.


WRKY Transcription Factors Phosphorylated by MAPK Regulate a Plant Immune NADPH Oxidase in Nicotiana benthamiana.

Adachi H, Nakano T, Miyagawa N, Ishihama N, Yoshioka M, Katou Y, Yaeno T, Shirasu K, Yoshioka H.

Plant Cell. 2015 Sep;27(9):2645-63. doi: 10.1105/tpc.15.00213. Epub 2015 Sep 15.


Exome Sequencing Identification of EP300 Mutation in a Proband with Coloboma and Imperforate Anus: Possible Expansion of the Phenotypic Spectrum of Rubinstein-Taybi Syndrome.

Masuda K, Akiyama K, Arakawa M, Nishi E, Kitazawa N, Higuchi T, Katou Y, Shirahige K, Izumi K.

Mol Syndromol. 2015 Jul;6(2):99-103. doi: 10.1159/000375542. Epub 2015 Mar 3.


Isolation of a Cyclic Depsipetide, Aspergillicin F, and Synthesis of Aspergillicins with Innate Immune-Modulating Activity.

Kikuchi H, Hoshikawa T, Fujimura S, Sakata N, Kurata S, Katou Y, Oshima Y.

J Nat Prod. 2015 Aug 28;78(8):1949-56. doi: 10.1021/acs.jnatprod.5b00286. Epub 2015 Aug 14.


Replication-Coupled PCNA Unloading by the Elg1 Complex Occurs Genome-wide and Requires Okazaki Fragment Ligation.

Kubota T, Katou Y, Nakato R, Shirahige K, Donaldson AD.

Cell Rep. 2015 Aug 4;12(5):774-87. doi: 10.1016/j.celrep.2015.06.066. Epub 2015 Jul 23.


Development of novel DIF-1 derivatives that selectively suppress innate immune responses.

Nguyen VH, Kikuchi H, Kubohara Y, Takahashi K, Katou Y, Oshima Y.

Bioorg Med Chem. 2015 Aug 1;23(15):4311-5. doi: 10.1016/j.bmc.2015.06.027. Epub 2015 Jun 17.


Quantitative Dynamics of Chromatin Remodeling during Germ Cell Specification from Mouse Embryonic Stem Cells.

Kurimoto K, Yabuta Y, Hayashi K, Ohta H, Kiyonari H, Mitani T, Moritoki Y, Kohri K, Kimura H, Yamamoto T, Katou Y, Shirahige K, Saitou M.

Cell Stem Cell. 2015 May 7;16(5):517-32. doi: 10.1016/j.stem.2015.03.002. Epub 2015 Mar 19.


Unique gene expression profile of the proliferating Xenopus tadpole tail blastema cells deciphered by RNA-sequencing analysis.

Tsujioka H, Kunieda T, Katou Y, Shirahige K, Kubo T.

PLoS One. 2015 Mar 16;10(3):e0111655. doi: 10.1371/journal.pone.0111655. eCollection 2015.


[Learning experiences of colorectal ESD in a community general hospital].

Hirakawa T, Asano K, Katou Y.

Gan To Kagaku Ryoho. 2014 Nov;41(12):1651-3. Japanese.


[Endoscopic stenting for patients with malignant colorectal obstruction in our hospital].

Hirakawa T, Katou Y.

Gan To Kagaku Ryoho. 2014 Nov;41(12):1485-7. Japanese.


Germline gain-of-function mutations in AFF4 cause a developmental syndrome functionally linking the super elongation complex and cohesin.

Izumi K, Nakato R, Zhang Z, Edmondson AC, Noon S, Dulik MC, Rajagopalan R, Venditti CP, Gripp K, Samanich J, Zackai EH, Deardorff MA, Clark D, Allen JL, Dorsett D, Misulovin Z, Komata M, Bando M, Kaur M, Katou Y, Shirahige K, Krantz ID.

Nat Genet. 2015 Apr;47(4):338-44. doi: 10.1038/ng.3229. Epub 2015 Mar 2.


The chromosomal association of the Smc5/6 complex depends on cohesion and predicts the level of sister chromatid entanglement.

Jeppsson K, Carlborg KK, Nakato R, Berta DG, Lilienthal I, Kanno T, Lindqvist A, Brink MC, Dantuma NP, Katou Y, Shirahige K, Sjögren C.

PLoS Genet. 2014 Oct 16;10(10):e1004680. doi: 10.1371/journal.pgen.1004680. eCollection 2014 Oct.


5-Hydroxymethylcytosine plays a critical role in glioblastomagenesis by recruiting the CHTOP-methylosome complex.

Takai H, Masuda K, Sato T, Sakaguchi Y, Suzuki T, Suzuki T, Koyama-Nasu R, Nasu-Nishimura Y, Katou Y, Ogawa H, Morishita Y, Kozuka-Hata H, Oyama M, Todo T, Ino Y, Mukasa A, Saito N, Toyoshima C, Shirahige K, Akiyama T.

Cell Rep. 2014 Oct 9;9(1):48-60. doi: 10.1016/j.celrep.2014.08.071. Epub 2014 Oct 2.


Dimeric combinations of MafB, cFos and cJun control the apoptosis-survival balance in limb morphogenesis.

Suda N, Itoh T, Nakato R, Shirakawa D, Bando M, Katou Y, Kataoka K, Shirahige K, Tickle C, Tanaka M.

Development. 2014 Jul;141(14):2885-94. doi: 10.1242/dev.099150.


Chromatin immunoprecipitation protocol for mammalian cells.

Komata M, Katou Y, Tanaka H, Nakato R, Shirahige K, Bando M.

Methods Mol Biol. 2014;1164:33-8. doi: 10.1007/978-1-4939-0805-9_4.


Pathological and immunohistochemical findings of natural highly pathogenic avian influenza infection in tufted ducks during 2010-2011 outbreaks in Japan.

Abdo W, Haridy M, Katou Y, Goto M, Mizoguchi T, Sakoda Y, Sakai H, Yanai T.

J Vet Med Sci. 2014 Sep;76(9):1285-90. Epub 2014 May 30.


Determination of 4-hydroxy-2-nonenal in serum by high-performance liquid chromatography with fluorescence detection after pre-column derivatization using 4-(N,N-dimethylaminosulfonyl)-7-hydrazino-2,1,3-benzoxadiazole.

Imazato T, Shiokawa A, Kurose Y, Katou Y, Kishikawa N, Ohyama K, Ali MF, Ueki Y, Maehata E, Kuroda N.

Biomed Chromatogr. 2014 Jun;28(6):891-4. doi: 10.1002/bmc.3204.


Determination of 4-hydroxy-2-nonenal in serum by high-performance liquid chromatography with fluorescence detection after pre-column derivatization using 4-(N,N-dimethylaminosulfonyl)-7-hydrazino-2, 1,3-benzoxadiazole.

Imazato T, Shiokawa A, Kurose Y, Katou Y, Kishikawa N, Ohyama K, Ali MF, Ueki Y, Maehata E, Kuroda N.

Biomed Chromatogr. 2014 Jun;28(6):858-61. doi: 10.1002/bmc.3166. Retraction in: Biomed Chromatogr. 2014 Oct;28(10):1430.


BRCA2 coordinates the activities of cell-cycle kinases to promote genome stability.

Yata K, Bleuyard JY, Nakato R, Ralf C, Katou Y, Schwab RA, Niedzwiedz W, Shirahige K, Esashi F.

Cell Rep. 2014 Jun 12;7(5):1547-1559. doi: 10.1016/j.celrep.2014.04.023. Epub 2014 May 15.


Metarhizin A suppresses cell proliferation by inhibiting cytochrome c oxidase activity.

Katou Y, Endo N, Suzuki T, Yu J, Kikuchi H, Oshima Y, Homma Y.

Life Sci. 2014 May 8;103(1):1-7. doi: 10.1016/j.lfs.2014.03.023. Epub 2014 Apr 1.


Dietary L-lysine prevents arterial calcification in adenine-induced uremic rats.

Shimomura A, Matsui I, Hamano T, Ishimoto T, Katou Y, Takehana K, Inoue K, Kusunoki Y, Mori D, Nakano C, Obi Y, Fujii N, Takabatake Y, Nakano T, Tsubakihara Y, Isaka Y, Rakugi H.

J Am Soc Nephrol. 2014 Sep;25(9):1954-65. doi: 10.1681/ASN.2013090967. Epub 2014 Mar 20.


Inactivation of SMC2 shows a synergistic lethal response in MYCN-amplified neuroblastoma cells.

Murakami-Tonami Y, Kishida S, Takeuchi I, Katou Y, Maris JM, Ichikawa H, Kondo Y, Sekido Y, Shirahige K, Murakami H, Kadomatsu K.

Cell Cycle. 2014;13(7):1115-31. doi: 10.4161/cc.27983. Epub 2014 Feb 7.


Histone variants enriched in oocytes enhance reprogramming to induced pluripotent stem cells.

Shinagawa T, Takagi T, Tsukamoto D, Tomaru C, Huynh LM, Sivaraman P, Kumarevel T, Inoue K, Nakato R, Katou Y, Sado T, Takahashi S, Ogura A, Shirahige K, Ishii S.

Cell Stem Cell. 2014 Feb 6;14(2):217-27. doi: 10.1016/j.stem.2013.12.015.


Novel chlorinated dibenzofurans isolated from the cellular slime mold, Polysphondylium filamentosum, and their biological activities.

Kikuchi H, Kubohara Y, Nguyen VH, Katou Y, Oshima Y.

Bioorg Med Chem. 2013 Aug 1;21(15):4628-33. doi: 10.1016/j.bmc.2013.05.022. Epub 2013 May 23.


Kinetochores coordinate pericentromeric cohesion and early DNA replication by Cdc7-Dbf4 kinase recruitment.

Natsume T, Müller CA, Katou Y, Retkute R, Gierliński M, Araki H, Blow JJ, Shirahige K, Nieduszynski CA, Tanaka TU.

Mol Cell. 2013 Jun 6;50(5):661-74. doi: 10.1016/j.molcel.2013.05.011.


The pleiotrophin-ALK axis is required for tumorigenicity of glioblastoma stem cells.

Koyama-Nasu R, Haruta R, Nasu-Nishimura Y, Taniue K, Katou Y, Shirahige K, Todo T, Ino Y, Mukasa A, Saito N, Matsui M, Takahashi R, Hoshino-Okubo A, Sugano H, Manabe E, Funato K, Akiyama T.

Oncogene. 2014 Apr 24;33(17):2236-44. doi: 10.1038/onc.2013.168. Epub 2013 May 20.


Eukaryotic replisome components cooperate to process histones during chromosome replication.

Foltman M, Evrin C, De Piccoli G, Jones RC, Edmondson RD, Katou Y, Nakato R, Shirahige K, Labib K.

Cell Rep. 2013 Mar 28;3(3):892-904. doi: 10.1016/j.celrep.2013.02.028. Epub 2013 Mar 14.


Importance of Polη for damage-induced cohesion reveals differential regulation of cohesion establishment at the break site and genome-wide.

Enervald E, Lindgren E, Katou Y, Shirahige K, Ström L.

PLoS Genet. 2013;9(1):e1003158. doi: 10.1371/journal.pgen.1003158. Epub 2013 Jan 10.


Dual structure-activity relationship of osteoclastogenesis inhibitor methyl gerfelin based on TEG scanning.

Kanoh N, Suzuki T, Kawatani M, Katou Y, Osada H, Iwabuchi Y.

Bioconjug Chem. 2013 Jan 16;24(1):44-52. doi: 10.1021/bc3003666. Epub 2013 Jan 7.


HDAC8 mutations in Cornelia de Lange syndrome affect the cohesin acetylation cycle.

Deardorff MA, Bando M, Nakato R, Watrin E, Itoh T, Minamino M, Saitoh K, Komata M, Katou Y, Clark D, Cole KE, De Baere E, Decroos C, Di Donato N, Ernst S, Francey LJ, Gyftodimou Y, Hirashima K, Hullings M, Ishikawa Y, Jaulin C, Kaur M, Kiyono T, Lombardi PM, Magnaghi-Jaulin L, Mortier GR, Nozaki N, Petersen MB, Seimiya H, Siu VM, Suzuki Y, Takagaki K, Wilde JJ, Willems PJ, Prigent C, Gillessen-Kaesbach G, Christianson DW, Kaiser FJ, Jackson LG, Hirota T, Krantz ID, Shirahige K.

Nature. 2012 Sep 13;489(7415):313-7. doi: 10.1038/nature11316.


Replisome stability at defective DNA replication forks is independent of S phase checkpoint kinases.

De Piccoli G, Katou Y, Itoh T, Nakato R, Shirahige K, Labib K.

Mol Cell. 2012 Mar 9;45(5):696-704. doi: 10.1016/j.molcel.2012.01.007. Epub 2012 Feb 9.


Endogenous DNA replication stress results in expansion of dNTP pools and a mutator phenotype.

Davidson MB, Katou Y, Keszthelyi A, Sing TL, Xia T, Ou J, Vaisica JA, Thevakumaran N, Marjavaara L, Myers CL, Chabes A, Shirahige K, Brown GW.

EMBO J. 2012 Feb 15;31(4):895-907. doi: 10.1038/emboj.2011.485. Epub 2012 Jan 10.


Origin association of Sld3, Sld7, and Cdc45 proteins is a key step for determination of origin-firing timing.

Tanaka S, Nakato R, Katou Y, Shirahige K, Araki H.

Curr Biol. 2011 Dec 20;21(24):2055-63. doi: 10.1016/j.cub.2011.11.038. Epub 2011 Dec 8.


General bottom-up construction of spherical particles by pulsed laser irradiation of colloidal nanoparticles: a case study on CuO.

Wang H, Kawaguchi K, Pyatenko A, Li X, Swiatkowska-Warkocka Z, Katou Y, Koshizaki N.

Chemistry. 2012 Jan 2;18(1):163-9. doi: 10.1002/chem.201102079. Epub 2011 Dec 2.


Detection of BCR-ABL-positive cells in the colostrum of a pregnant patient with chronic myeloid leukemia.

Hiroshima Y, Tajima K, Shiono Y, Suzuki I, Kouno K, Katou Y, Kato T.

Intern Med. 2011;50(20):2389-91. Epub 2011 Oct 15.


Structures of the dimeric and monomeric chromanones, gonytolides A-C, isolated from the fungus Gonytrichum sp. and their promoting activities of innate immune responses.

Kikuchi H, Isobe M, Sekiya M, Abe Y, Hoshikawa T, Ueda K, Kurata S, Katou Y, Oshima Y.

Org Lett. 2011 Sep 2;13(17):4624-7. doi: 10.1021/ol2018449. Epub 2011 Aug 9.


Identification of Sc-type ILV6 as a target to reduce diacetyl formation in lager brewers' yeast.

Duong CT, Strack L, Futschik M, Katou Y, Nakao Y, Fujimura T, Shirahige K, Kodama Y, Nevoigt E.

Metab Eng. 2011 Nov;13(6):638-47. doi: 10.1016/j.ymben.2011.07.005. Epub 2011 Aug 3.


The replication checkpoint protects fork stability by releasing transcribed genes from nuclear pores.

Bermejo R, Capra T, Jossen R, Colosio A, Frattini C, Carotenuto W, Cocito A, Doksani Y, Klein H, Gómez-González B, Aguilera A, Katou Y, Shirahige K, Foiani M.

Cell. 2011 Jul 22;146(2):233-46. doi: 10.1016/j.cell.2011.06.033.

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