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Items: 1 to 50 of 58

1.

A Genomic View of Alternative Splicing of Long Non-coding RNAs during Rice Seed Development Reveals Extensive Splicing and lncRNA Gene Families.

Kiegle EA, Garden A, Lacchini E, Kater MM.

Front Plant Sci. 2018 Feb 7;9:115. doi: 10.3389/fpls.2018.00115. eCollection 2018.

2.

Gene expression profiling of reproductive meristem types in early rice inflorescences by laser microdissection.

Harrop TW, Ud Din I, Gregis V, Osnato M, Jouannic S, Adam H, Kater MM.

Plant J. 2016 Apr;86(1):75-88. doi: 10.1111/tpj.13147.

3.

PGR5-PGRL1-Dependent Cyclic Electron Transport Modulates Linear Electron Transport Rate in Arabidopsis thaliana.

Suorsa M, Rossi F, Tadini L, Labs M, Colombo M, Jahns P, Kater MM, Leister D, Finazzi G, Aro EM, Barbato R, Pesaresi P.

Mol Plant. 2016 Feb 1;9(2):271-288. doi: 10.1016/j.molp.2015.12.001. Epub 2015 Dec 11.

4.

Genome-Wide Transcriptome Analysis During Anthesis Reveals New Insights into the Molecular Basis of Heat Stress Responses in Tolerant and Sensitive Rice Varieties.

González-Schain N, Dreni L, Lawas LM, Galbiati M, Colombo L, Heuer S, Jagadish KS, Kater MM.

Plant Cell Physiol. 2016 Jan;57(1):57-68. doi: 10.1093/pcp/pcv174. Epub 2015 Nov 11.

5.

Peptide aptamers: The versatile role of specific protein function inhibitors in plant biotechnology.

Colombo M, Mizzotti C, Masiero S, Kater MM, Pesaresi P.

J Integr Plant Biol. 2015 Nov;57(11):892-901. doi: 10.1111/jipb.12368. Epub 2015 Jul 2. Review.

PMID:
25966787
6.

SEEDSTICK is a master regulator of development and metabolism in the Arabidopsis seed coat.

Mizzotti C, Ezquer I, Paolo D, Rueda-Romero P, Guerra RF, Battaglia R, Rogachev I, Aharoni A, Kater MM, Caporali E, Colombo L.

PLoS Genet. 2014 Dec 18;10(12):e1004856. doi: 10.1371/journal.pgen.1004856. eCollection 2014 Dec.

7.

Analysis of the arabidopsis REM gene family predicts functions during flower development.

Mantegazza O, Gregis V, Mendes MA, Morandini P, Alves-Ferreira M, Patreze CM, Nardeli SM, Kater MM, Colombo L.

Ann Bot. 2014 Nov;114(7):1507-15. doi: 10.1093/aob/mcu124. Epub 2014 Jul 6.

8.

SHORT VEGETATIVE PHASE reduces gibberellin biosynthesis at the Arabidopsis shoot apex to regulate the floral transition.

Andrés F, Porri A, Torti S, Mateos J, Romera-Branchat M, García-Martínez JL, Fornara F, Gregis V, Kater MM, Coupland G.

Proc Natl Acad Sci U S A. 2014 Jul 1;111(26):E2760-9. doi: 10.1073/pnas.1409567111. Epub 2014 Jun 16.

9.

OsJAR1 is required for JA-regulated floret opening and anther dehiscence in rice.

Xiao Y, Chen Y, Charnikhova T, Mulder PP, Heijmans J, Hoogenboom A, Agalou A, Michel C, Morel JB, Dreni L, Kater MM, Bouwmeester H, Wang M, Zhu Z, Ouwerkerk PB.

Plant Mol Biol. 2014 Sep;86(1-2):19-33. doi: 10.1007/s11103-014-0212-y. Epub 2014 Jun 20.

PMID:
24947835
10.

Gene coexpression patterns during early development of the native Arabidopsis reproductive meristem: novel candidate developmental regulators and patterns of functional redundancy.

Mantegazza O, Gregis V, Chiara M, Selva C, Leo G, Horner DS, Kater MM.

Plant J. 2014 Sep;79(5):861-77. doi: 10.1111/tpj.12585. Epub 2014 Jul 28.

11.

Class I BASIC PENTACYSTEINE factors regulate HOMEOBOX genes involved in meristem size maintenance.

Simonini S, Kater MM.

J Exp Bot. 2014 Apr;65(6):1455-65. doi: 10.1093/jxb/eru003. Epub 2014 Jan 30.

12.

Flower development: open questions and future directions.

Wellmer F, Bowman JL, Davies B, Ferrándiz C, Fletcher JC, Franks RG, Graciet E, Gregis V, Ito T, Jack TP, Jiao Y, Kater MM, Ma H, Meyerowitz EM, Prunet N, Riechmann JL.

Methods Mol Biol. 2014;1110:103-24. doi: 10.1007/978-1-4614-9408-9_5. Review.

PMID:
24395254
13.

MADS reloaded: evolution of the AGAMOUS subfamily genes.

Dreni L, Kater MM.

New Phytol. 2014 Feb;201(3):717-32. doi: 10.1111/nph.12555. Epub 2013 Oct 25. Review.

14.

MADS domain transcription factors mediate short-range DNA looping that is essential for target gene expression in Arabidopsis.

Mendes MA, Guerra RF, Berns MC, Manzo C, Masiero S, Finzi L, Kater MM, Colombo L.

Plant Cell. 2013 Jul;25(7):2560-72. doi: 10.1105/tpc.112.108688. Epub 2013 Jul 11.

15.

Identification of pathways directly regulated by SHORT VEGETATIVE PHASE during vegetative and reproductive development in Arabidopsis.

Gregis V, Andrés F, Sessa A, Guerra RF, Simonini S, Mateos JL, Torti S, Zambelli F, Prazzoli GM, Bjerkan KN, Grini PE, Pavesi G, Colombo L, Coupland G, Kater MM.

Genome Biol. 2013 Jun 11;14(6):R56. doi: 10.1186/gb-2013-14-6-r56.

16.

Arabidopsis plants lacking PsbQ and PsbR subunits of the oxygen-evolving complex show altered PSII super-complex organization and short-term adaptive mechanisms.

Allahverdiyeva Y, Suorsa M, Rossi F, Pavesi A, Kater MM, Antonacci A, Tadini L, Pribil M, Schneider A, Wanner G, Leister D, Aro EM, Barbato R, Pesaresi P.

Plant J. 2013 Aug;75(4):671-84. doi: 10.1111/tpj.12230. Epub 2013 Jun 7.

17.

TAF13 interacts with PRC2 members and is essential for Arabidopsis seed development.

Lindner M, Simonini S, Kooiker M, Gagliardini V, Somssich M, Hohenstatt M, Simon R, Grossniklaus U, Kater MM.

Dev Biol. 2013 Jul 1;379(1):28-37. doi: 10.1016/j.ydbio.2013.03.005. Epub 2013 Mar 15.

18.

The ins and outs of the rice AGAMOUS subfamily.

Dreni L, Osnato M, Kater MM.

Mol Plant. 2013 May;6(3):650-64. doi: 10.1093/mp/sst019. Epub 2013 Jan 31. Review.

19.

OsMADS16 genetically interacts with OsMADS3 and OsMADS58 in specifying floral patterning in rice.

Yun D, Liang W, Dreni L, Yin C, Zhou Z, Kater MM, Zhang D.

Mol Plant. 2013 May;6(3):743-56. doi: 10.1093/mp/sst003. Epub 2013 Jan 8.

20.

Basic pentacysteine proteins mediate MADS domain complex binding to the DNA for tissue-specific expression of target genes in Arabidopsis.

Simonini S, Roig-Villanova I, Gregis V, Colombo B, Colombo L, Kater MM.

Plant Cell. 2012 Oct;24(10):4163-72. doi: 10.1105/tpc.112.103952. Epub 2012 Oct 9.

21.

The MADS box genes SEEDSTICK and ARABIDOPSIS Bsister play a maternal role in fertilization and seed development.

Mizzotti C, Mendes MA, Caporali E, Schnittger A, Kater MM, Battaglia R, Colombo L.

Plant J. 2012 May;70(3):409-20. doi: 10.1111/j.1365-313X.2011.04878.x. Epub 2012 Jan 16.

22.

Uncovering genetic and molecular interactions among floral meristem identity genes in Arabidopsis thaliana.

Grandi V, Gregis V, Kater MM.

Plant J. 2012 Mar;69(5):881-93. doi: 10.1111/j.1365-313X.2011.04840.x. Epub 2011 Dec 12.

23.

Functional analysis of all AGAMOUS subfamily members in rice reveals their roles in reproductive organ identity determination and meristem determinacy.

Dreni L, Pilatone A, Yun D, Erreni S, Pajoro A, Caporali E, Zhang D, Kater MM.

Plant Cell. 2011 Aug;23(8):2850-63. doi: 10.1105/tpc.111.087007. Epub 2011 Aug 2.

24.

Rice MADS6 interacts with the floral homeotic genes SUPERWOMAN1, MADS3, MADS58, MADS13, and DROOPING LEAF in specifying floral organ identities and meristem fate.

Li H, Liang W, Hu Y, Zhu L, Yin C, Xu J, Dreni L, Kater MM, Zhang D.

Plant Cell. 2011 Jul;23(7):2536-52. doi: 10.1105/tpc.111.087262. Epub 2011 Jul 22.

25.

The Arabidopsis SOC1-like genes AGL42, AGL71 and AGL72 promote flowering in the shoot apical and axillary meristems.

Dorca-Fornell C, Gregis V, Grandi V, Coupland G, Colombo L, Kater MM.

Plant J. 2011 Sep;67(6):1006-17. doi: 10.1111/j.1365-313X.2011.04653.x. Epub 2011 Jul 1.

26.

The emerging importance of type I MADS box transcription factors for plant reproduction.

Masiero S, Colombo L, Grini PE, Schnittger A, Kater MM.

Plant Cell. 2011 Mar;23(3):865-72. doi: 10.1105/tpc.110.081737. Epub 2011 Mar 4. Review.

27.

Reversible male sterility in eggplant (Solanum melongena L.) by artificial microRNA-mediated silencing of general transcription factor genes.

Toppino L, Kooiker M, Lindner M, Dreni L, Rotino GL, Kater MM.

Plant Biotechnol J. 2011 Aug;9(6):684-92. doi: 10.1111/j.1467-7652.2010.00567.x. Epub 2010 Oct 18.

28.

The genome of the domesticated apple (Malus × domestica Borkh.).

Velasco R, Zharkikh A, Affourtit J, Dhingra A, Cestaro A, Kalyanaraman A, Fontana P, Bhatnagar SK, Troggio M, Pruss D, Salvi S, Pindo M, Baldi P, Castelletti S, Cavaiuolo M, Coppola G, Costa F, Cova V, Dal Ri A, Goremykin V, Komjanc M, Longhi S, Magnago P, Malacarne G, Malnoy M, Micheletti D, Moretto M, Perazzolli M, Si-Ammour A, Vezzulli S, Zini E, Eldredge G, Fitzgerald LM, Gutin N, Lanchbury J, Macalma T, Mitchell JT, Reid J, Wardell B, Kodira C, Chen Z, Desany B, Niazi F, Palmer M, Koepke T, Jiwan D, Schaeffer S, Krishnan V, Wu C, Chu VT, King ST, Vick J, Tao Q, Mraz A, Stormo A, Stormo K, Bogden R, Ederle D, Stella A, Vecchietti A, Kater MM, Masiero S, Lasserre P, Lespinasse Y, Allan AC, Bus V, Chagné D, Crowhurst RN, Gleave AP, Lavezzo E, Fawcett JA, Proost S, Rouzé P, Sterck L, Toppo S, Lazzari B, Hellens RP, Durel CE, Gutin A, Bumgarner RE, Gardiner SE, Skolnick M, Egholm M, Van de Peer Y, Salamini F, Viola R.

Nat Genet. 2010 Oct;42(10):833-9. doi: 10.1038/ng.654. Epub 2010 Aug 29.

PMID:
20802477
29.

VERDANDI is a direct target of the MADS domain ovule identity complex and affects embryo sac differentiation in Arabidopsis.

Matias-Hernandez L, Battaglia R, Galbiati F, Rubes M, Eichenberger C, Grossniklaus U, Kater MM, Colombo L.

Plant Cell. 2010 Jun;22(6):1702-15. doi: 10.1105/tpc.109.068627. Epub 2010 Jun 25.

30.

The Arabidopsis BET bromodomain factor GTE4 is involved in maintenance of the mitotic cell cycle during plant development.

Airoldi CA, Rovere FD, Falasca G, Marino G, Kooiker M, Altamura MM, Citterio S, Kater MM.

Plant Physiol. 2010 Mar;152(3):1320-34. doi: 10.1104/pp.109.150631. Epub 2009 Dec 23.

31.

A new role for the SHATTERPROOF genes during Arabidopsis gynoecium development.

Colombo M, Brambilla V, Marcheselli R, Caporali E, Kater MM, Colombo L.

Dev Biol. 2010 Jan 15;337(2):294-302. doi: 10.1016/j.ydbio.2009.10.043. Epub 2009 Nov 6.

32.

The Arabidopsis floral meristem identity genes AP1, AGL24 and SVP directly repress class B and C floral homeotic genes.

Gregis V, Sessa A, Dorca-Fornell C, Kater MM.

Plant J. 2009 Nov;60(4):626-37. doi: 10.1111/j.1365-313X.2009.03985.x. Epub 2009 Jul 25.

33.

AGAMOUS-LIKE24 and SHORT VEGETATIVE PHASE determine floral meristem identity in Arabidopsis.

Gregis V, Sessa A, Colombo L, Kater MM.

Plant J. 2008 Dec;56(6):891-902. doi: 10.1111/j.1365-313X.2008.03648.x. Epub 2008 Aug 6.

34.

Arabidopsis ovule development and its evolutionary conservation.

Colombo L, Battaglia R, Kater MM.

Trends Plant Sci. 2008 Aug;13(8):444-50. doi: 10.1016/j.tplants.2008.04.011. Epub 2008 Jun 19. Review.

PMID:
18571972
35.

AGL23, a type I MADS-box gene that controls female gametophyte and embryo development in Arabidopsis.

Colombo M, Masiero S, Vanzulli S, Lardelli P, Kater MM, Colombo L.

Plant J. 2008 Jun;54(6):1037-48. doi: 10.1111/j.1365-313X.2008.03485.x. Epub 2008 Mar 13.

36.

The D-lineage MADS-box gene OsMADS13 controls ovule identity in rice.

Dreni L, Jacchia S, Fornara F, Fornari M, Ouwerkerk PB, An G, Colombo L, Kater MM.

Plant J. 2007 Nov;52(4):690-9. Epub 2007 Sep 17.

37.

Genetic and molecular interactions between BELL1 and MADS box factors support ovule development in Arabidopsis.

Brambilla V, Battaglia R, Colombo M, Masiero S, Bencivenga S, Kater MM, Colombo L.

Plant Cell. 2007 Aug;19(8):2544-56. Epub 2007 Aug 10.

38.

The use of floral homeotic mutants as a novel way to obtain durable resistance to insect pests.

Kater MM, Franken J, Inggamer H, Gretenkort M, van Tunen AJ, Mollema C, Angenent GC.

Plant Biotechnol J. 2003 Mar;1(2):123-7.

39.

Functional conservation of MADS-box factors controlling floral organ identity in rice and Arabidopsis.

Kater MM, Dreni L, Colombo L.

J Exp Bot. 2006;57(13):3433-44. Epub 2006 Sep 12. Review.

40.
41.

Functional analysis of MADS-box genes controlling ovule development in Arabidopsis using the ethanol-inducible alc gene-expression system.

Battaglia R, Brambilla V, Colombo L, Stuitje AR, Kater MM.

Mech Dev. 2006 Apr;123(4):267-76. Epub 2006 Mar 2.

42.

The Arabidopsis TFIID factor AtTAF6 controls pollen tube growth.

Lago C, Clerici E, Dreni L, Horlow C, Caporali E, Colombo L, Kater MM.

Dev Biol. 2005 Sep 1;285(1):91-100.

43.

Comprehensive interaction map of the Arabidopsis MADS Box transcription factors.

de Folter S, Immink RG, Kieffer M, Parenicová L, Henz SR, Weigel D, Busscher M, Kooiker M, Colombo L, Kater MM, Davies B, Angenent GC.

Plant Cell. 2005 May;17(5):1424-33. Epub 2005 Apr 1.

44.

BASIC PENTACYSTEINE1, a GA binding protein that induces conformational changes in the regulatory region of the homeotic Arabidopsis gene SEEDSTICK.

Kooiker M, Airoldi CA, Losa A, Manzotti PS, Finzi L, Kater MM, Colombo L.

Plant Cell. 2005 Mar;17(3):722-9. Epub 2005 Feb 18.

45.

TBP-associated factors in Arabidopsis.

Lago C, Clerici E, Mizzi L, Colombo L, Kater MM.

Gene. 2004 Nov 24;342(2):231-41.

PMID:
15527982
46.

Functional characterization of OsMADS18, a member of the AP1/SQUA subfamily of MADS box genes.

Fornara F, Parenicová L, Falasca G, Pelucchi N, Masiero S, Ciannamea S, Lopez-Dee Z, Altamura MM, Colombo L, Kater MM.

Plant Physiol. 2004 Aug;135(4):2207-19. Epub 2004 Aug 6.

47.

MADS-box protein complexes control carpel and ovule development in Arabidopsis.

Favaro R, Pinyopich A, Battaglia R, Kooiker M, Borghi L, Ditta G, Yanofsky MF, Kater MM, Colombo L.

Plant Cell. 2003 Nov;15(11):2603-11. Epub 2003 Oct 10.

48.

Molecular and phylogenetic analyses of the complete MADS-box transcription factor family in Arabidopsis: new openings to the MADS world.

Parenicová L, de Folter S, Kieffer M, Horner DS, Favalli C, Busscher J, Cook HE, Ingram RM, Kater MM, Davies B, Angenent GC, Colombo L.

Plant Cell. 2003 Jul;15(7):1538-51.

49.

Ternary complex formation between MADS-box transcription factors and the histone fold protein NF-YB.

Masiero S, Imbriano C, Ravasio F, Favaro R, Pelucchi N, Gorla MS, Mantovani R, Colombo L, Kater MM.

J Biol Chem. 2002 Jul 19;277(29):26429-35. Epub 2002 Apr 23.

50.

Sex determination in the monoecious species cucumber is confined to specific floral whorls.

Kater MM, Franken J, Carney KJ, Colombo L, Angenent GC.

Plant Cell. 2001 Mar;13(3):481-93.

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