PubMed

Ser-Giacomi E, Zinger L, Malviya S, De Vargas C, Karsenti E, Bowler C, De Monte S.

Nat Ecol Evol. 2018 Aug;2(8):1243-1249. doi: 10.1038/s41559-018-0587-2. Epub 2018 Jun 18.

Carradec Q, Pelletier E, Da Silva C, Alberti A, Seeleuthner Y, Blanc-Mathieu R, Lima-Mendez G, Rocha F, Tirichine L, Labadie K, Kirilovsky A, Bertrand A, Engelen S, Madoui MA, Méheust R, Poulain J, Romac S, Richter DJ, Yoshikawa G, Dimier C, Kandels-Lewis S, Picheral M, Searson S; Tara Oceans Coordinators, Jaillon O, Aury JM, Karsenti E, Sullivan MB, Sunagawa S, Bork P, Not F, Hingamp P, Raes J, Guidi L, Ogata H, de Vargas C, Iudicone D, Bowler C, Wincker P.

Nat Commun. 2018 Jan 25;9(1):373. doi: 10.1038/s41467-017-02342-1.

Seeleuthner Y, Mondy S, Lombard V, Carradec Q, Pelletier E, Wessner M, Leconte J, Mangot JF, Poulain J, Labadie K, Logares R, Sunagawa S, de Berardinis V, Salanoubat M, Dimier C, Kandels-Lewis S, Picheral M, Searson S; Tara Oceans Coordinators, Pesant S, Poulton N, Stepanauskas R, Bork P, Bowler C, Hingamp P, Sullivan MB, Iudicone D, Massana R, Aury JM, Henrissat B, Karsenti E, Jaillon O, Sieracki M, de Vargas C, Wincker P.

Nat Commun. 2018 Jan 22;9(1):310. doi: 10.1038/s41467-017-02235-3.

Colin S, Coelho LP, Sunagawa S, Bowler C, Karsenti E, Bork P, Pepperkok R, de Vargas C.

Elife. 2017 Oct 31;6. pii: e26066. doi: 10.7554/eLife.26066.

Alberti A, Poulain J, Engelen S, Labadie K, Romac S, Ferrera I, Albini G, Aury JM, Belser C, Bertrand A, Cruaud C, Da Silva C, Dossat C, Gavory F, Gas S, Guy J, Haquelle M, Jacoby E, Jaillon O, Lemainque A, Pelletier E, Samson G, Wessner M; Genoscope Technical Team, Acinas SG, Royo-Llonch M, Cornejo-Castillo FM, Logares R, Fernández-Gómez B, Bowler C, Cochrane G, Amid C, Hoopen PT, De Vargas C, Grimsley N, Desgranges E, Kandels-Lewis S, Ogata H, Poulton N, Sieracki ME, Stepanauskas R, Sullivan MB, Brum JR, Duhaime MB, Poulos BT, Hurwitz BL; Tara Oceans Consortium Coordinators, Pesant S, Karsenti E, Wincker P.

Sci Data. 2017 Aug 1;4:170093. doi: 10.1038/sdata.2017.93.

Arrigoni R, Vacherie B, Benzoni F, Stefani F, Karsenti E, Jaillon O, Not F, Nunes F, Payri C, Wincker P, Barbe V.

Mol Ecol Resour. 2017 Sep;17(5):1054-1071. doi: 10.1111/1755-0998.12640. Epub 2017 Jan 23.

Zitouni S, Francia ME, Leal F, Montenegro Gouveia S, Nabais C, Duarte P, Gilberto S, Brito D, Moyer T, Kandels-Lewis S, Ohta M, Kitagawa D, Holland AJ, Karsenti E, Lorca T, Lince-Faria M, Bettencourt-Dias M.

Curr Biol. 2016 May 9;26(9):1127-37. doi: 10.1016/j.cub.2016.03.055. Epub 2016 Apr 21.

Guidi L, Chaffron S, Bittner L, Eveillard D, Larhlimi A, Roux S, Darzi Y, Audic S, Berline L, Brum J, Coelho LP, Espinoza JCI, Malviya S, Sunagawa S, Dimier C, Kandels-Lewis S, Picheral M, Poulain J, Searson S; Tara Oceans coordinators, Stemmann L, Not F, Hingamp P, Speich S, Follows M, Karp-Boss L, Boss E, Ogata H, Pesant S, Weissenbach J, Wincker P, Acinas SG, Bork P, de Vargas C, Iudicone D, Sullivan MB, Raes J, Karsenti E, Bowler C, Gorsky G.

Nature. 2016 Apr 28;532(7600):465-470. doi: 10.1038/nature16942. Epub 2016 Feb 10.

Pesant S, Not F, Picheral M, Kandels-Lewis S, Le Bescot N, Gorsky G, Iudicone D, Karsenti E, Speich S, Troublé R, Dimier C, Searson S; Tara Oceans Consortium Coordinators.

Sci Data. 2015 May 26;2:150023. doi: 10.1038/sdata.2015.23. eCollection 2015.

Lima-Mendez G, Faust K, Henry N, Decelle J, Colin S, Carcillo F, Chaffron S, Ignacio-Espinosa JC, Roux S, Vincent F, Bittner L, Darzi Y, Wang J, Audic S, Berline L, Bontempi G, Cabello AM, Coppola L, Cornejo-Castillo FM, d'Ovidio F, De Meester L, Ferrera I, Garet-Delmas MJ, Guidi L, Lara E, Pesant S, Royo-Llonch M, Salazar G, Sánchez P, Sebastian M, Souffreau C, Dimier C, Picheral M, Searson S, Kandels-Lewis S; Tara Oceans coordinators, Gorsky G, Not F, Ogata H, Speich S, Stemmann L, Weissenbach J, Wincker P, Acinas SG, Sunagawa S, Bork P, Sullivan MB, Karsenti E, Bowler C, de Vargas C, Raes J.

Science. 2015 May 22;348(6237):1262073. doi: 10.1126/science.1262073.

de Vargas C, Audic S, Henry N, Decelle J, Mahé F, Logares R, Lara E, Berney C, Le Bescot N, Probert I, Carmichael M, Poulain J, Romac S, Colin S, Aury JM, Bittner L, Chaffron S, Dunthorn M, Engelen S, Flegontova O, Guidi L, Horák A, Jaillon O, Lima-Mendez G, Lukeš J, Malviya S, Morard R, Mulot M, Scalco E, Siano R, Vincent F, Zingone A, Dimier C, Picheral M, Searson S, Kandels-Lewis S; Tara Oceans Coordinators, Acinas SG, Bork P, Bowler C, Gorsky G, Grimsley N, Hingamp P, Iudicone D, Not F, Ogata H, Pesant S, Raes J, Sieracki ME, Speich S, Stemmann L, Sunagawa S, Weissenbach J, Wincker P, Karsenti E.

Science. 2015 May 22;348(6237):1261605. doi: 10.1126/science.1261605.

Brum JR, Ignacio-Espinoza JC, Roux S, Doulcier G, Acinas SG, Alberti A, Chaffron S, Cruaud C, de Vargas C, Gasol JM, Gorsky G, Gregory AC, Guidi L, Hingamp P, Iudicone D, Not F, Ogata H, Pesant S, Poulos BT, Schwenck SM, Speich S, Dimier C, Kandels-Lewis S, Picheral M, Searson S; Tara Oceans Coordinators, Bork P, Bowler C, Sunagawa S, Wincker P, Karsenti E, Sullivan MB.

Science. 2015 May 22;348(6237):1261498. doi: 10.1126/science.1261498. Erratum in: Science. 2016 Aug 12;353(6300). pii: aah6502. doi: 10.1126/science.aah6502.

Villar E, Farrant GK, Follows M, Garczarek L, Speich S, Audic S, Bittner L, Blanke B, Brum JR, Brunet C, Casotti R, Chase A, Dolan JR, d'Ortenzio F, Gattuso JP, Grima N, Guidi L, Hill CN, Jahn O, Jamet JL, Le Goff H, Lepoivre C, Malviya S, Pelletier E, Romagnan JB, Roux S, Santini S, Scalco E, Schwenck SM, Tanaka A, Testor P, Vannier T, Vincent F, Zingone A, Dimier C, Picheral M, Searson S, Kandels-Lewis S; Tara Oceans Coordinators, Acinas SG, Bork P, Boss E, de Vargas C, Gorsky G, Ogata H, Pesant S, Sullivan MB, Sunagawa S, Wincker P, Karsenti E, Bowler C, Not F, Hingamp P, Iudicone D.

Science. 2015 May 22;348(6237):1261447. doi: 10.1126/science.1261447.

Sunagawa S, Coelho LP, Chaffron S, Kultima JR, Labadie K, Salazar G, Djahanschiri B, Zeller G, Mende DR, Alberti A, Cornejo-Castillo FM, Costea PI, Cruaud C, d'Ovidio F, Engelen S, Ferrera I, Gasol JM, Guidi L, Hildebrand F, Kokoszka F, Lepoivre C, Lima-Mendez G, Poulain J, Poulos BT, Royo-Llonch M, Sarmento H, Vieira-Silva S, Dimier C, Picheral M, Searson S, Kandels-Lewis S; Tara Oceans coordinators, Bowler C, de Vargas C, Gorsky G, Grimsley N, Hingamp P, Iudicone D, Jaillon O, Not F, Ogata H, Pesant S, Speich S, Stemmann L, Sullivan MB, Weissenbach J, Wincker P, Karsenti E, Raes J, Acinas SG, Bork P.

Science. 2015 May 22;348(6237):1261359. doi: 10.1126/science.1261359.

Bork P, Bowler C, de Vargas C, Gorsky G, Karsenti E, Wincker P.

Science. 2015 May 22;348(6237):873. doi: 10.1126/science.aac5605. Epub 2015 May 21. No abstract available.

Karsenti E.

Mol Syst Biol. 2015 May 21;11(5):811. doi: 10.15252/msb.20156271. No abstract available.

Sunagawa S, Karsenti E, Bowler C, Bork P.

Mol Syst Biol. 2015 May 21;11(5):809. doi: 10.15252/msb.20156272. No abstract available.

Athale CA, Dinarina A, Nedelec F, Karsenti E.

Phys Biol. 2014 Feb;11(1):016008. doi: 10.1088/1478-3975/11/1/016008. Epub 2014 Jan 29.

Pizon V, Rybina S, Gerbal F, Delort F, Vicart P, Baldacci G, Karsenti E.

PLoS One. 2013 Oct 4;8(10):e76140. doi: 10.1371/journal.pone.0076140. eCollection 2013.

Logares R, Sunagawa S, Salazar G, Cornejo-Castillo FM, Ferrera I, Sarmento H, Hingamp P, Ogata H, de Vargas C, Lima-Mendez G, Raes J, Poulain J, Jaillon O, Wincker P, Kandels-Lewis S, Karsenti E, Bork P, Acinas SG.

Environ Microbiol. 2014 Sep;16(9):2659-71. doi: 10.1111/1462-2920.12250. Epub 2013 Sep 18.

Hingamp P, Grimsley N, Acinas SG, Clerissi C, Subirana L, Poulain J, Ferrera I, Sarmento H, Villar E, Lima-Mendez G, Faust K, Sunagawa S, Claverie JM, Moreau H, Desdevises Y, Bork P, Raes J, de Vargas C, Karsenti E, Kandels-Lewis S, Jaillon O, Not F, Pesant S, Wincker P, Ogata H.

ISME J. 2013 Sep;7(9):1678-95. doi: 10.1038/ismej.2013.59. Epub 2013 Apr 11.

Karsenti E.

Mol Biol Cell. 2012 Jul;23(13):2403-6. doi: 10.1091/mbc.E11-06-0571.

Karsenti E.

Mol Syst Biol. 2012 Mar 27;8:575. doi: 10.1038/msb.2012.8. No abstract available.

Karsenti E, Acinas SG, Bork P, Bowler C, De Vargas C, Raes J, Sullivan M, Arendt D, Benzoni F, Claverie JM, Follows M, Gorsky G, Hingamp P, Iudicone D, Jaillon O, Kandels-Lewis S, Krzic U, Not F, Ogata H, Pesant S, Reynaud EG, Sardet C, Sieracki ME, Speich S, Velayoudon D, Weissenbach J, Wincker P; Tara Oceans Consortium.

PLoS Biol. 2011 Oct;9(10):e1001177. doi: 10.1371/journal.pbio.1001177. Epub 2011 Oct 18.

Yokoyama H, Rybina S, Santarella-Mellwig R, Mattaj IW, Karsenti E.

J Cell Biol. 2009 Dec 14;187(6):813-29. doi: 10.1083/jcb.200906020.

Dinarina A, Pugieux C, Corral MM, Loose M, Spatz J, Karsenti E, Nédélec F.

Cell. 2009 Aug 7;138(3):502-13. doi: 10.1016/j.cell.2009.05.027.

Kronja I, Kruljac-Letunic A, Caudron-Herger M, Bieling P, Karsenti E.

Mol Biol Cell. 2009 Jun;20(11):2684-96. doi: 10.1091/mbc.E08-10-1051. Epub 2009 Apr 15.

Mozziconacci J, Sandblad L, Wachsmuth M, Brunner D, Karsenti E.

PLoS One. 2008;3(11):e3821. doi: 10.1371/journal.pone.0003821. Epub 2008 Nov 27.

Athale CA, Dinarina A, Mora-Coral M, Pugieux C, Nedelec F, Karsenti E.

Science. 2008 Nov 21;322(5905):1243-7. doi: 10.1126/science.1161820. Epub 2008 Oct 23.

Casanova CM, Rybina S, Yokoyama H, Karsenti E, Mattaj IW.

Mol Biol Cell. 2008 Nov;19(11):4900-8. doi: 10.1091/mbc.E08-06-0624. Epub 2008 Sep 17.

Yokoyama H, Gruss OJ, Rybina S, Caudron M, Schelder M, Wilm M, Mattaj IW, Karsenti E.

J Cell Biol. 2008 Mar 10;180(5):867-75. doi: 10.1083/jcb.200706189. Epub 2008 Mar 3.

Karsenti E.

Nat Rev Mol Cell Biol. 2008 Mar;9(3):255-62. doi: 10.1038/nrm2357. Review.

Niethammer P, Kronja I, Kandels-Lewis S, Rybina S, Bastiaens P, Karsenti E.

PLoS Biol. 2007 Feb;5(2):e29.

Karsenti E, Nédélec F, Surrey T.

Nat Cell Biol. 2006 Nov;8(11):1204-11. Review.

Brunet S, Zimmermann T, Reynaud EG, Vernos I, Karsenti E, Pepperkok R.

Traffic. 2006 Sep;7(9):1283-9.

Bastiaens P, Caudron M, Niethammer P, Karsenti E.

Trends Cell Biol. 2006 Mar;16(3):125-34. Epub 2006 Feb 14.

Pizon V, Gerbal F, Diaz CC, Karsenti E.

EMBO J. 2005 Nov 2;24(21):3781-92. Epub 2005 Oct 20.

Caudron M, Bunt G, Bastiaens P, Karsenti E.

Science. 2005 Aug 26;309(5739):1373-6.

Karsenti E.

Mol Cell. 2005 Aug 19;19(4):431-2. Review.

Karsenti E.

Nature. 2004 Dec 2;432(7017):563-4. No abstract available.

Shirasu-Hiza M, Perlman ZE, Wittmann T, Karsenti E, Mitchison TJ.

Curr Biol. 2004 Nov 9;14(21):1941-5.

Brunet S, Sardon T, Zimmerman T, Wittmann T, Pepperkok R, Karsenti E, Vernos I.

Mol Biol Cell. 2004 Dec;15(12):5318-28. Epub 2004 Sep 22.

Liska AJ, Popov AV, Sunyaev S, Coughlin P, Habermann B, Shevchenko A, Bork P, Karsenti E, Shevchenko A.

Proteomics. 2004 Sep;4(9):2707-21.

Karsenti E, Nédélec F.

Biol Cell. 2004 Apr;96(3):237-40. Review.

Niethammer P, Bastiaens P, Karsenti E.

Science. 2004 Mar 19;303(5665):1862-6.

Popov AV, Karsenti E.

Trends Cell Biol. 2003 Nov;13(11):547-50.

Carazo-Salas RE, Karsenti E.

Curr Biol. 2003 Sep 30;13(19):1728-33.

Schatz CA, Santarella R, Hoenger A, Karsenti E, Mattaj IW, Gruss OJ, Carazo-Salas RE.

EMBO J. 2003 May 1;22(9):2060-70.

Nédélec F, Surrey T, Karsenti E.

Curr Opin Cell Biol. 2003 Feb;15(1):118-24. Review.

Pizon V, Iakovenko A, Van Der Ven PF, Kelly R, Fatu C, Fürst DO, Karsenti E, Gautel M.

J Cell Sci. 2002 Dec 1;115(Pt 23):4469-82.