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Items: 14

1.

Complete Genome Sequence of Lactobacillus acidophilus FSI4, Isolated from Yogurt.

Iartchouk O, Kozyavkin S, Karamychev V, Slesarev A.

Genome Announc. 2015 Apr 9;3(2). pii: e00166-15. doi: 10.1128/genomeA.00166-15.

2.

Radioprobing the conformation of DNA in a p53-DNA complex.

Karamychev VN, Wang D, Mazur SJ, Appella E, Neumann RD, Zhurkin VB, Panyutin IG.

Int J Radiat Biol. 2012 Dec;88(12):1039-45. doi: 10.3109/09553002.2012.698030. Epub 2012 Jun 21.

3.

Comparative genomic analysis of the gut bacterium Bifidobacterium longum reveals loci susceptible to deletion during pure culture growth.

Lee JH, Karamychev VN, Kozyavkin SA, Mills D, Pavlov AR, Pavlova NV, Polouchine NN, Richardson PM, Shakhova VV, Slesarev AI, Weimer B, O'Sullivan DJ.

BMC Genomics. 2008 May 27;9:247. doi: 10.1186/1471-2164-9-247.

4.

Genome comparison and proteomic characterization of Thermus thermophilus bacteriophages P23-45 and P74-26: siphoviruses with triplex-forming sequences and the longest known tails.

Minakhin L, Goel M, Berdygulova Z, Ramanculov E, Florens L, Glazko G, Karamychev VN, Slesarev AI, Kozyavkin SA, Khromov I, Ackermann HW, Washburn M, Mushegian A, Severinov K.

J Mol Biol. 2008 Apr 25;378(2):468-80. doi: 10.1016/j.jmb.2008.02.018. Epub 2008 Feb 15.

5.

Comparative genomics of the lactic acid bacteria.

Makarova K, Slesarev A, Wolf Y, Sorokin A, Mirkin B, Koonin E, Pavlov A, Pavlova N, Karamychev V, Polouchine N, Shakhova V, Grigoriev I, Lou Y, Rohksar D, Lucas S, Huang K, Goodstein DM, Hawkins T, Plengvidhya V, Welker D, Hughes J, Goh Y, Benson A, Baldwin K, Lee JH, Díaz-Muñiz I, Dosti B, Smeianov V, Wechter W, Barabote R, Lorca G, Altermann E, Barrangou R, Ganesan B, Xie Y, Rawsthorne H, Tamir D, Parker C, Breidt F, Broadbent J, Hutkins R, O'Sullivan D, Steele J, Unlu G, Saier M, Klaenhammer T, Richardson P, Kozyavkin S, Weimer B, Mills D.

Proc Natl Acad Sci U S A. 2006 Oct 17;103(42):15611-6. Epub 2006 Oct 9.

6.

Antigene radiotherapy: targeted radiodamage with 125i-labeled triplex-forming oligonucleotides.

Panyutin IG, Sedelnikova OA, Karamychev VN, Neumann RD.

Ann N Y Acad Sci. 2003 Dec;1002:134-40. Review.

PMID:
14751831
7.

Iodine-125 radioprobing of E. coli RNA polymerase transcription elongation complexes.

Karamychev VN, Tatusov A, Komissarova N, Kashlev M, Neumann RD, Zhurkin VB, Panyutin IG.

Methods Enzymol. 2003;371:106-20. No abstract available.

PMID:
14712694
8.

Sequence-specific gene cleavage in intact mammalian cells by 125I-labeled triplex-forming oligonucleotides conjugated with nuclear localization signal peptide.

Sedelnikova OA, Karamychev VN, Panyutin IG, Neumann RD.

Antisense Nucleic Acid Drug Dev. 2002 Feb;12(1):43-9.

PMID:
12022689
9.

Development of DNA-based radiopharmaceuticals carrying Auger-electron emitters for antigene radiotherapy.

Sedelnikova OA, Luu AN, Karamychev VN, Panyutin IG, Neumann RD.

Int J Radiat Oncol Biol Phys. 2001 Feb 1;49(2):391-6.

PMID:
11173132
10.

Distribution of DNA strand breaks produced by iodine-123 and indium-111 in synthetic oligodeoxynucleotides.

Karamychev VN, Reed MW, Neumann RD, Panyutin IG.

Acta Oncol. 2000;39(6):687-92.

PMID:
11130005
11.

DNA cleavage by 111In-labeled oligodeoxyribonucleotides.

Karamychev VN, Panyutin IG, Kim MK, Le N, Paik CH, Carrasquillo JA, Reed MW, Neumann RD.

J Nucl Med. 2000 Jun;41(6):1093-101.

12.

DNA and RNA folds in transcription complex as evidenced by iodine-125 radioprobing.

Karamychev VN, Panyutin IG, Neumann RD, Zhurkin VB.

J Biomol Struct Dyn. 2000;17 Suppl 1:155-67.

PMID:
22607419
13.

Detecting the DNA kinks in a DNA-CRP complex in solution with iodine-125 radioprobing.

Karamychev VN, Zhurkin VB, Garges S, Neumann RD, Panyutin IG.

Nat Struct Biol. 1999 Aug;6(8):747-50.

PMID:
10426952
14.

Effect of radionuclide linker structure on DNA cleavage by 125I-labeled oligonucleotides.

Karamychev VN, Panyutin IG, Reed MW, Neumann RD.

Antisense Nucleic Acid Drug Dev. 1997 Dec;7(6):549-57.

PMID:
9450912

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