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Items: 19

1.

The improved assembly of 7DL chromosome provides insight into the structure and evolution of bread wheat.

Feng K, Cui L, Wang L, Shan D, Tong W, Deng P, Yan Z, Wang M, Zhan H, Wu X, He W, Zhou X, Ji J, Zhang G, Mao L, Karafiátová M, Šimková H, Doležel J, Du X, Zhao S, Luo MC, Han D, Zhang C, Kang Z, Appels R, Edwards D, Nie X, Weining S.

Plant Biotechnol J. 2019 Aug 31. doi: 10.1111/pbi.13240. [Epub ahead of print]

2.

Identification of a Dominant Chlorosis Phenotype Through a Forward Screen of the Triticum turgidum cv. Kronos TILLING Population.

Harrington SA, Cobo N, Karafiátová M, Doležel J, Borrill P, Uauy C.

Front Plant Sci. 2019 Jul 24;10:963. doi: 10.3389/fpls.2019.00963. eCollection 2019.

3.

Dissecting the Complex Genome of Crested Wheatgrass by Chromosome Flow Sorting.

Said M, Kubaláková M, Karafiátová M, Molnár I, Doležel J, Vrána J.

Plant Genome. 2019 Jun;12(2). doi: 10.3835/plantgenome2018.12.0096.

4.

The Dark Matter of Large Cereal Genomes: Long Tandem Repeats.

Kapustová V, Tulpová Z, Toegelová H, Novák P, Macas J, Karafiátová M, Hřibová E, Doležel J, Šimková H.

Int J Mol Sci. 2019 May 20;20(10). pii: E2483. doi: 10.3390/ijms20102483.

5.

The Coiled-Coil NLR Rph1, Confers Leaf Rust Resistance in Barley Cultivar Sudan.

Dracatos PM, Bartoš J, Elmansour H, Singh D, Karafiátová M, Zhang P, Steuernagel B, Svačina R, Cobbin JCA, Clark B, Hoxha S, Khatkar MS, Doležel J, Wulff BB, Park RF.

Plant Physiol. 2019 Apr;179(4):1362-1372. doi: 10.1104/pp.18.01052. Epub 2018 Dec 28.

6.

The Aquilegia genome provides insight into adaptive radiation and reveals an extraordinarily polymorphic chromosome with a unique history.

Filiault DL, Ballerini ES, Mandáková T, Aköz G, Derieg NJ, Schmutz J, Jenkins J, Grimwood J, Shu S, Hayes RD, Hellsten U, Barry K, Yan J, Mihaltcheva S, Karafiátová M, Nizhynska V, Kramer EM, Lysak MA, Hodges SA, Nordborg M.

Elife. 2018 Oct 16;7. pii: e36426. doi: 10.7554/eLife.36426.

7.

The Agropyron cristatum karyotype, chromosome structure and cross-genome homoeology as revealed by fluorescence in situ hybridization with tandem repeats and wheat single-gene probes.

Said M, Hřibová E, Danilova TV, Karafiátová M, Čížková J, Friebe B, Doležel J, Gill BS, Vrána J.

Theor Appl Genet. 2018 Oct;131(10):2213-2227. doi: 10.1007/s00122-018-3148-9. Epub 2018 Aug 1.

8.

Pm21 from Haynaldia villosa Encodes a CC-NBS-LRR Protein Conferring Powdery Mildew Resistance in Wheat.

Xing L, Hu P, Liu J, Witek K, Zhou S, Xu J, Zhou W, Gao L, Huang Z, Zhang R, Wang X, Chen P, Wang H, Jones JDG, Karafiátová M, Vrána J, Bartoš J, Doležel J, Tian Y, Wu Y, Cao A.

Mol Plant. 2018 Jun 4;11(6):874-878. doi: 10.1016/j.molp.2018.02.013. Epub 2018 Mar 20. No abstract available.

9.

Rht18 Semidwarfism in Wheat Is Due to Increased GA 2-oxidaseA9 Expression and Reduced GA Content.

Ford BA, Foo E, Sharwood R, Karafiatova M, Vrána J, MacMillan C, Nichols DS, Steuernagel B, Uauy C, Doležel J, Chandler PM, Spielmeyer W.

Plant Physiol. 2018 May;177(1):168-180. doi: 10.1104/pp.18.00023. Epub 2018 Mar 15.

10.

Transcriptome reprogramming due to the introduction of a barley telosome into bread wheat affects more barley genes than wheat.

Rey E, Abrouk M, Keeble-Gagnère G, Karafiátová M, Vrána J, Balzergue S, Soubigou-Taconnat L, Brunaud V, Martin-Magniette ML, Endo TR, Bartoš J; International Wheat Genome Sequencing Consortium (IWGSC), Appels R, Doležel J.

Plant Biotechnol J. 2018 Oct;16(10):1767-1777. doi: 10.1111/pbi.12913. Epub 2018 Apr 13.

11.

Rapid Gene Isolation Using MutChromSeq.

Steuernagel B, Vrána J, Karafiátová M, Wulff BBH, Doležel J.

Methods Mol Biol. 2017;1659:231-243. doi: 10.1007/978-1-4939-7249-4_20.

PMID:
28856655
12.

Flow Analysis and Sorting of Plant Chromosomes.

Vrána J, Cápal P, Šimková H, Karafiátová M, Čížková J, Doležel J.

Curr Protoc Cytom. 2016 Oct 10;78:5.3.1-5.3.43. doi: 10.1002/cpcy.9.

PMID:
27723090
13.

Localization of Low-Copy DNA Sequences on Mitotic Chromosomes by FISH.

Karafiátová M, Bartoš J, Doležel J.

Methods Mol Biol. 2016;1429:49-64. doi: 10.1007/978-1-4939-3622-9_5.

PMID:
27511166
14.

The utility of flow sorting to identify chromosomes carrying a single copy transgene in wheat.

Cápal P, Endo TR, Vrána J, Kubaláková M, Karafiátová M, Komínková E, Mora-Ramírez I, Weschke W, Doležel J.

Plant Methods. 2016 Apr 25;12:24. doi: 10.1186/s13007-016-0124-8. eCollection 2016.

15.

Cytogenetic mapping with centromeric bacterial artificial chromosomes contigs shows that this recombination-poor region comprises more than half of barley chromosome 3H.

Aliyeva-Schnorr L, Beier S, Karafiátová M, Schmutzer T, Scholz U, Doležel J, Stein N, Houben A.

Plant J. 2015 Oct;84(2):385-94. doi: 10.1111/tpj.13006.

16.

Characterization of repetitive DNA landscape in wheat homeologous group 4 chromosomes.

Garbus I, Romero JR, Valarik M, Vanžurová H, Karafiátová M, Cáccamo M, Doležel J, Tranquilli G, Helguera M, Echenique V.

BMC Genomics. 2015 May 12;16:375. doi: 10.1186/s12864-015-1579-0.

17.

A chromosomal genomics approach to assess and validate the desi and kabuli draft chickpea genome assemblies.

Ruperao P, Chan CK, Azam S, Karafiátová M, Hayashi S, Cížková J, Saxena RK, Simková H, Song C, Vrána J, Chitikineni A, Visendi P, Gaur PM, Millán T, Singh KB, Taran B, Wang J, Batley J, Doležel J, Varshney RK, Edwards D.

Plant Biotechnol J. 2014 Aug;12(6):778-86. doi: 10.1111/pbi.12182. Epub 2014 Apr 5.

18.

Flow sorting and sequencing meadow fescue chromosome 4F.

Kopecký D, Martis M, Číhalíková J, Hřibová E, Vrána J, Bartoš J, Kopecká J, Cattonaro F, Stočes Š, Novák P, Neumann P, Macas J, Šimková H, Studer B, Asp T, Baird JH, Navrátil P, Karafiátová M, Kubaláková M, Šafář J, Mayer K, Doležel J.

Plant Physiol. 2013 Nov;163(3):1323-37. doi: 10.1104/pp.113.224105. Epub 2013 Oct 4.

19.

Mapping nonrecombining regions in barley using multicolor FISH.

Karafiátová M, Bartoš J, Kopecký D, Ma L, Sato K, Houben A, Stein N, Doležel J.

Chromosome Res. 2013 Dec;21(8):739-51. doi: 10.1007/s10577-013-9380-x. Epub 2013 Sep 12.

PMID:
24026304

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