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Items: 1 to 50 of 72

1.

Whole blood transcriptome analysis reveals footprints of cattle adaptation to sub-arctic conditions.

Pokharel K, Weldenegodguad M, Popov R, Honkatukia M, Huuki H, Lindeberg H, Peippo J, Reilas T, Zarovnyaev S, Kantanen J.

Anim Genet. 2019 Jun;50(3):217-227. doi: 10.1111/age.12783. Epub 2019 Apr 7.

2.

Genomic selection strategies for breeding adaptation and production in dairy cattle under climate change.

Strandén I, Kantanen J, Russo IM, Orozco-terWengel P, Bruford MW; Climgen Consortium.

Heredity (Edinb). 2019 Mar 18. doi: 10.1038/s41437-019-0207-1. [Epub ahead of print]

PMID:
30886391
3.

Whole-Genome Sequencing of Three Native Cattle Breeds Originating From the Northernmost Cattle Farming Regions.

Weldenegodguad M, Popov R, Pokharel K, Ammosov I, Ming Y, Ivanova Z, Kantanen J.

Front Genet. 2019 Jan 11;9:728. doi: 10.3389/fgene.2018.00728. eCollection 2018.

4.

Patterns of homozygosity in insular and continental goat breeds.

Cardoso TF, Amills M, Bertolini F, Rothschild M, Marras G, Boink G, Jordana J, Capote J, Carolan S, Hallsson JH, Kantanen J, Pons A, Lenstra JA; AdaptMap Consortium.

Genet Sel Evol. 2018 Nov 19;50(1):56. doi: 10.1186/s12711-018-0425-7.

5.

Comparative mRNA and miRNA expression in European mouflon (Ovis musimon) and sheep (Ovis aries) provides novel insights into the genetic mechanisms for female reproductive success.

Yang J, Li X, Cao YH, Pokharel K, Hu XJ, Chen ZH, Xu SS, Peippo J, Honkatukia M, Kantanen J, Li MH.

Heredity (Edinb). 2019 Feb;122(2):172-186. doi: 10.1038/s41437-018-0090-1. Epub 2018 May 21.

6.

Genome-Wide Association Analyses Highlight the Potential for Different Genetic Mechanisms for Litter Size Among Sheep Breeds.

Xu SS, Gao L, Xie XL, Ren YL, Shen ZQ, Wang F, Shen M, Eyϸórsdóttir E, Hallsson JH, Kiseleva T, Kantanen J, Li MH.

Front Genet. 2018 Apr 10;9:118. doi: 10.3389/fgene.2018.00118. eCollection 2018.

7.

Integrated ovarian mRNA and miRNA transcriptome profiling characterizes the genetic basis of prolificacy traits in sheep (Ovis aries).

Pokharel K, Peippo J, Honkatukia M, Seppälä A, Rautiainen J, Ghanem N, Hamama TM, Crowe MA, Andersson M, Li MH, Kantanen J.

BMC Genomics. 2018 Jan 29;19(1):104. doi: 10.1186/s12864-017-4400-4.

8.

Distribution and Functionality of Copy Number Variation across European Cattle Populations.

Upadhyay M, da Silva VH, Megens HJ, Visker MHPW, Ajmone-Marsan P, Bâlteanu VA, Dunner S, Garcia JF, Ginja C, Kantanen J, Groenen MAM, Crooijmans RPMA.

Front Genet. 2017 Aug 23;8:108. doi: 10.3389/fgene.2017.00108. eCollection 2017.

9.

A genome-wide association study reveals candidate genes for the supernumerary nipple phenotype in sheep (Ovis aries).

Peng WF, Xu SS, Ren X, Lv FH, Xie XL, Zhao YX, Zhang M, Shen ZQ, Ren YL, Gao L, Shen M, Kantanen J, Li MH.

Anim Genet. 2017 Oct;48(5):570-579. doi: 10.1111/age.12575. Epub 2017 Jul 12.

PMID:
28703336
10.

Genome-wide association analysis identifies the genetic basis of fat deposition in the tails of sheep (Ovis aries).

Xu SS, Ren X, Yang GL, Xie XL, Zhao YX, Zhang M, Shen ZQ, Ren YL, Gao L, Shen M, Kantanen J, Li MH.

Anim Genet. 2017 Oct;48(5):560-569. doi: 10.1111/age.12572. Epub 2017 Jul 4.

PMID:
28677334
11.

Genomic Reconstruction of the History of Native Sheep Reveals the Peopling Patterns of Nomads and the Expansion of Early Pastoralism in East Asia.

Zhao YX, Yang J, Lv FH, Hu XJ, Xie XL, Zhang M, Li WR, Liu MJ, Wang YT, Li JQ, Liu YG, Ren YL, Wang F, Hehua E, Kantanen J, Arjen Lenstra J, Han JL, Li MH.

Mol Biol Evol. 2017 Sep 1;34(9):2380-2395. doi: 10.1093/molbev/msx181.

12.

MHC-B variability within the Finnish Landrace chicken conservation program.

Fulton JE, Berres ME, Kantanen J, Honkatukia M.

Poult Sci. 2017 Sep 1;96(9):3026-3030. doi: 10.3382/ps/pex102.

PMID:
28453652
13.

Potential emigration of Siberian cattle germplasm on Chirikof Island, Alaska.

Macneil MD, Alexander LJ, Kantanen J, Ammosov IA, Ivanova ZI, Popov RG, Ozerov M, Millbrooke A, Cronin MA.

J Genet. 2017 Mar;96(1):47-51.

14.

Genetic diversity and genomic signatures of selection among cattle breeds from Siberia, eastern and northern Europe.

Iso-Touru T, Tapio M, Vilkki J, Kiseleva T, Ammosov I, Ivanova Z, Popov R, Ozerov M, Kantanen J.

Anim Genet. 2016 Dec;47(6):647-657. doi: 10.1111/age.12473. Epub 2016 Sep 15.

PMID:
27629771
15.

[Horse, cow and reindeer were converted into arctic domestic animals].

Kantanen J.

Duodecim. 2016;132(13-14):1231-6. Review. Finnish.

PMID:
27522831
16.

Domesticated Animal Biobanking: Land of Opportunity.

Groeneveld LF, Gregusson S, Guldbrandtsen B, Hiemstra SJ, Hveem K, Kantanen J, Lohi H, Stroemstedt L, Berg P.

PLoS Biol. 2016 Jul 28;14(7):e1002523. doi: 10.1371/journal.pbio.1002523. eCollection 2016 Jul.

17.

Whole-Genome Sequencing of Native Sheep Provides Insights into Rapid Adaptations to Extreme Environments.

Yang J, Li WR, Lv FH, He SG, Tian SL, Peng WF, Sun YW, Zhao YX, Tu XL, Zhang M, Xie XL, Wang YT, Li JQ, Liu YG, Shen ZQ, Wang F, Liu GJ, Lu HF, Kantanen J, Han JL, Li MH, Liu MJ.

Mol Biol Evol. 2016 Oct;33(10):2576-92. doi: 10.1093/molbev/msw129. Epub 2016 Jul 8.

18.

Microsatellite diversity of the Nordic type of goats in relation to breed conservation: how relevant is pure ancestry?

Lenstra JA, Tigchelaar J, Biebach I; Econogene Consortium, Hallsson JH, Kantanen J, Nielsen VH, Pompanon F, Naderi S, Rezaei HR, Saether N, Ertugrul O, Grossen C, Camenisch G, Vos-Loohuis M, van Straten M, de Poel EA, Windig J, Oldenbroek K.

J Anim Breed Genet. 2017 Feb;134(1):78-84. doi: 10.1111/jbg.12226. Epub 2016 Jun 24.

PMID:
27339108
19.

Erratum: A genome-wide association study identifies a genomic region for the polycerate phenotype in sheep (Ovis aries).

Ren X, Yang GL, Peng WF, Zhao YX, Zhang M, Chen ZH, Wu FA, Kantanen J, Shen M, Li MH.

Sci Rep. 2016 May 20;7:25322. doi: 10.1038/srep25322. No abstract available.

20.

A genome-wide association study identifies a genomic region for the polycerate phenotype in sheep (Ovis aries).

Ren X, Yang GL, Peng WF, Zhao YX, Zhang M, Chen ZH, Wu FA, Kantanen J, Shen M, Li MH.

Sci Rep. 2016 Feb 17;6:21111. doi: 10.1038/srep21111. Erratum in: Sci Rep. 2016;7:25322.

21.

Origins of cattle on Chirikof Island, Alaska, elucidated from genome-wide SNP genotypes.

Decker JE, Taylor JF, Kantanen J, Millbrooke A, Schnabel RD, Alexander LJ, MacNeil MD.

Heredity (Edinb). 2016 Jun;116(6):502-5. doi: 10.1038/hdy.2016.7. Epub 2016 Feb 10.

22.

Maternal and paternal genetic diversity of ancient sheep in Estonia from the Late Bronze Age to the post-medieval period and comparison with other regions in Eurasia.

Rannamäe E, Lõugas L, Niemi M, Kantanen J, Maldre L, Kadõrova N, Saarma U.

Anim Genet. 2016 Apr;47(2):208-18. doi: 10.1111/age.12407. Epub 2016 Jan 25.

PMID:
26805771
23.

Tracking the origins of Yakutian horses and the genetic basis for their fast adaptation to subarctic environments.

Librado P, Der Sarkissian C, Ermini L, Schubert M, Jónsson H, Albrechtsen A, Fumagalli M, Yang MA, Gamba C, Seguin-Orlando A, Mortensen CD, Petersen B, Hoover CA, Lorente-Galdos B, Nedoluzhko A, Boulygina E, Tsygankova S, Neuditschko M, Jagannathan V, Thèves C, Alfarhan AH, Alquraishi SA, Al-Rasheid KA, Sicheritz-Ponten T, Popov R, Grigoriev S, Alekseev AN, Rubin EM, McCue M, Rieder S, Leeb T, Tikhonov A, Crubézy E, Slatkin M, Marques-Bonet T, Nielsen R, Willerslev E, Kantanen J, Prokhortchouk E, Orlando L.

Proc Natl Acad Sci U S A. 2015 Dec 15;112(50):E6889-97. doi: 10.1073/pnas.1513696112. Epub 2015 Nov 23.

24.

Identification and characterization of miRNAs in the ovaries of a highly prolific sheep breed.

Hu X, Pokharel K, Peippo J, Ghanem N, Zhaboyev I, Kantanen J, Li MH.

Anim Genet. 2016 Apr;47(2):234-9. doi: 10.1111/age.12385. Epub 2015 Nov 19.

PMID:
26582387
25.

Prospects and challenges for the conservation of farm animal genomic resources, 2015-2025.

Bruford MW, Ginja C, Hoffmann I, Joost S, Orozco-terWengel P, Alberto FJ, Amaral AJ, Barbato M, Biscarini F, Colli L, Costa M, Curik I, Duruz S, Ferenčaković M, Fischer D, Fitak R, Groeneveld LF, Hall SJ, Hanotte O, Hassan FU, Helsen P, Iacolina L, Kantanen J, Leempoel K, Lenstra JA, Ajmone-Marsan P, Masembe C, Megens HJ, Miele M, Neuditschko M, Nicolazzi EL, Pompanon F, Roosen J, Sevane N, Smetko A, Štambuk A, Streeter I, Stucki S, Supakorn C, Telo Da Gama L, Tixier-Boichard M, Wegmann D, Zhan X.

Front Genet. 2015 Oct 21;6:314. doi: 10.3389/fgene.2015.00314. eCollection 2015.

26.

Mitogenomic Meta-Analysis Identifies Two Phases of Migration in the History of Eastern Eurasian Sheep.

Lv FH, Peng WF, Yang J, Zhao YX, Li WR, Liu MJ, Ma YH, Zhao QJ, Yang GL, Wang F, Li JQ, Liu YG, Shen ZQ, Zhao SG, Hehua E, Gorkhali NA, Farhad Vahidi SM, Muladno M, Naqvi AN, Tabell J, Iso-Touru T, Bruford MW, Kantanen J, Han JL, Li MH.

Mol Biol Evol. 2015 Oct;32(10):2515-33. doi: 10.1093/molbev/msv139. Epub 2015 Jun 16.

27.

Utilization of farm animal genetic resources in a changing agro-ecological environment in the Nordic countries.

Kantanen J, Løvendahl P, Strandberg E, Eythorsdottir E, Li MH, Kettunen-Præbel A, Berg P, Meuwissen T.

Front Genet. 2015 Feb 25;6:52. doi: 10.3389/fgene.2015.00052. eCollection 2015.

28.

[Linkage disequilibrium analysis for microsatellite loci in six cattle breeds].

Kiseleva TIu, Kantanen J, Vorob'ev NI, Podoba BE, Terletskiĭ VP.

Genetika. 2014 Apr;50(4):464-73. Russian.

PMID:
25715448
29.

Adaptations to climate-mediated selective pressures in sheep.

Lv FH, Agha S, Kantanen J, Colli L, Stucki S, Kijas JW, Joost S, Li MH, Ajmone Marsan P.

Mol Biol Evol. 2014 Dec;31(12):3324-43. doi: 10.1093/molbev/msu264. Epub 2014 Sep 23.

30.

Y chromosome haplotype diversity of domestic sheep (Ovis aries) in northern Eurasia.

Zhang M, Peng WF, Yang GL, Lv FH, Liu MJ, Li WR, Liu YG, Li JQ, Wang F, Shen ZQ, Zhao SG, Hehua E, Marzanov N, Murawski M, Kantanen J, Li MH.

Anim Genet. 2014 Dec;45(6):903-7. doi: 10.1111/age.12214. Epub 2014 Sep 10.

PMID:
25204383
31.

Economic values of production and functional traits, including residual feed intake, in Finnish milk production.

Hietala P, Wolfová M, Wolf J, Kantanen J, Juga J.

J Dairy Sci. 2014 Feb;97(2):1092-106. doi: 10.3168/jds.2013-7085. Epub 2013 Dec 15.

32.

A genome-wide scan study identifies a single nucleotide substitution in ASIP associated with white versus non-white coat-colour variation in sheep (Ovis aries).

Li MH, Tiirikka T, Kantanen J.

Heredity (Edinb). 2014 Feb;112(2):122-31. doi: 10.1038/hdy.2013.83. Epub 2013 Sep 11.

33.

Mitochondrial DNA and Y-chromosomal diversity in ancient populations of domestic sheep (Ovis aries) in Finland: comparison with contemporary sheep breeds.

Niemi M, Bläuer A, Iso-Touru T, Nyström V, Harjula J, Taavitsainen JP, Storå J, Lidén K, Kantanen J.

Genet Sel Evol. 2013 Jan 22;45:2. doi: 10.1186/1297-9686-45-2.

34.

Molecular tools and analytical approaches for the characterization of farm animal genetic diversity.

Lenstra JA, Groeneveld LF, Eding H, Kantanen J, Williams JL, Taberlet P, Nicolazzi EL, Sölkner J, Simianer H, Ciani E, Garcia JF, Bruford MW, Ajmone-Marsan P, Weigend S.

Anim Genet. 2012 Oct;43(5):483-502. doi: 10.1111/j.1365-2052.2011.02309.x. Epub 2012 Jan 4. Review.

PMID:
22497351
35.

Genetic diversity and admixture of indigenous cattle from North Ethiopia: implications of historical introgressions in the gateway region to Africa.

Zerabruk M, Li MH, Kantanen J, Olsaker I, Ibeagha-Awemu EM, Erhardt G, Vangen O.

Anim Genet. 2012 Jun;43(3):257-66. doi: 10.1111/j.1365-2052.2011.02245.x. Epub 2011 Oct 12.

PMID:
22486496
36.

A comparison of approaches to estimate the inbreeding coefficient and pairwise relatedness using genomic and pedigree data in a sheep population.

Li MH, Strandén I, Tiirikka T, Sevón-Aimonen ML, Kantanen J.

PLoS One. 2011;6(11):e26256. doi: 10.1371/journal.pone.0026256. Epub 2011 Nov 9.

37.

Genetic components of grey cattle in Estonia as revealed by microsatellite analysis using two Bayesian clustering methods.

Li MH, Kantanen J, Michelson A, Saarma U.

BMC Res Notes. 2011 Feb 11;4:37. doi: 10.1186/1756-0500-4-37.

38.

Dual origins of dairy cattle farming--evidence from a comprehensive survey of European Y-chromosomal variation.

Edwards CJ, Ginja C, Kantanen J, Pérez-Pardal L, Tresset A, Stock F; European Cattle Genetic Diversity Consortium, Gama LT, Penedo MC, Bradley DG, Lenstra JA, Nijman IJ.

PLoS One. 2011 Jan 6;6(1):e15922. doi: 10.1371/journal.pone.0015922.

39.

Microsatellite-based genetic diversity and population structure of domestic sheep in northern Eurasia.

Tapio M, Ozerov M, Tapio I, Toro MA, Marzanov N, Cinkulov M, Goncharenko G, Kiselyova T, Murawski M, Kantanen J.

BMC Genet. 2010 Aug 10;11:76. doi: 10.1186/1471-2156-11-76.

40.

A microsatellite-based analysis for the detection of selection on BTA1 and BTA20 in northern Eurasian cattle (Bos taurus) populations.

Li MH, Iso-Touru T, Laurén H, Kantanen J.

Genet Sel Evol. 2010 Aug 6;42:32. doi: 10.1186/1297-9686-42-32.

41.

Estimation of relatedness among non-pedigreed Yakutian cryo-bank bulls using molecular data: implications for conservation and breed management.

Tapio I, Tapio M, Li MH, Popov R, Ivanova Z, Kantanen J.

Genet Sel Evol. 2010 Jul 13;42:28. doi: 10.1186/1297-9686-42-28.

42.

Genetic structure of Eurasian cattle (Bos taurus) based on microsatellites: clarification for their breed classification.

Li MH, Kantanen J.

Anim Genet. 2010 Apr;41(2):150-8. doi: 10.1111/j.1365-2052.2009.01980.x. Epub 2009 Oct 21.

PMID:
19845598
43.

Copy number variation of testis-specific protein, Y-encoded (TSPY) in 14 different breeds of cattle (Bos taurus).

Hamilton CK, Favetta LA, Di Meo GP, Floriot S, Perucatti A, Peippo J, Kantanen J, Eggen A, Iannuzzi L, King WA.

Sex Dev. 2009;3(4):205-13. doi: 10.1159/000228721. Epub 2009 Sep 11.

PMID:
19752600
44.

Divergent evolution in the cytoplasmic domains of PRLR and GHR genes in Artiodactyla.

Iso-Touru T, Kantanen J, Li MH, Gizejewski Z, Vilkki J.

BMC Evol Biol. 2009 Jul 22;9:172. doi: 10.1186/1471-2148-9-172.

45.

Maternal and paternal genealogy of Eurasian taurine cattle (Bos taurus).

Kantanen J, Edwards CJ, Bradley DG, Viinalass H, Thessler S, Ivanova Z, Kiselyova T, Cinkulov M, Popov R, Stojanović S, Ammosov I, Vilkki J.

Heredity (Edinb). 2009 Nov;103(5):404-15. doi: 10.1038/hdy.2009.68. Epub 2009 Jul 15.

46.

A SNP in the HSP90AA1 gene 5' flanking region is associated with the adaptation to differential thermal conditions in the ovine species.

Marcos-Carcavilla A, Mutikainen M, González C, Calvo JH, Kantanen J, Sanz A, Marzanov NS, Pérez-Guzmán MD, Serrano M.

Cell Stress Chaperones. 2010 Jan;15(1):67-81. doi: 10.1007/s12192-009-0123-z. Epub 2009 Jun 4.

47.

Revealing the history of sheep domestication using retrovirus integrations.

Chessa B, Pereira F, Arnaud F, Amorim A, Goyache F, Mainland I, Kao RR, Pemberton JM, Beraldi D, Stear MJ, Alberti A, Pittau M, Iannuzzi L, Banabazi MH, Kazwala RR, Zhang YP, Arranz JJ, Ali BA, Wang Z, Uzun M, Dione MM, Olsaker I, Holm LE, Saarma U, Ahmad S, Marzanov N, Eythorsdottir E, Holland MJ, Ajmone-Marsan P, Bruford MW, Kantanen J, Spencer TE, Palmarini M.

Science. 2009 Apr 24;324(5926):532-6. doi: 10.1126/science.1170587.

48.

Genetic diversity and structure of the West Balkan Pramenka sheep types as revealed by microsatellite and mitochondrial DNA analysis.

Cinkulov M, Popovski Z, Porcu K, Tanaskovska B, Hodzić A, Bytyqi H, Mehmeti H, Margeta V, Djedović R, Hoda A, Trailović R, Brka M, Marković B, Vazić B, Vegara M, Olsaker I, Kantanen J.

J Anim Breed Genet. 2008 Dec;125(6):417-26. doi: 10.1111/j.1439-0388.2008.00742.x.

PMID:
19134078
49.

Genetic diversity and pedigree analysis of the Finnsheep breed.

Li MH, Strandén I, Kantanen J.

J Anim Sci. 2009 May;87(5):1598-605. doi: 10.2527/jas.2008-0848. Epub 2009 Jan 2.

PMID:
19122044
50.

Genetic differentiation between the Old and New types of Serbian Tsigai sheep.

Cinkulov M, Tapio M, Ozerov M, Kiselyova T, Marzanov N, Pihler I, Olsaker I, Vegara M, Kantanen J.

Genet Sel Evol. 2008 May-Jun;40(3):321-31. doi: 10.1051/gse:2008006. Epub 2008 Apr 10.

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