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Best matches for Kangasjärvi J[au]:

Genome sequencing and population genomic analyses provide insights into the adaptive landscape of silver birch. Salojärvi J et al. Nat Genet. (2017)

Reactive Oxygen Species in Plant Signaling. Waszczak C et al. Annu Rev Plant Biol. (2018)

Plant PARPs, PARGs and PARP-like Proteins. Vainonen JP et al. Curr Protein Pept Sci. (2016)

Search results

Items: 1 to 50 of 94

1.

Author Correction: Genome sequencing and population genomic analyses provide insights into the adaptive landscape of silver birch.

Salojärvi J, Smolander OP, Nieminen K, Rajaraman S, Safronov O, Safdari P, Lamminmäki A, Immanen J, Lan T, Tanskanen J, Rastas P, Amiryousefi A, Jayaprakash B, Kammonen JI, Hagqvist R, Eswaran G, Ahonen VH, Serra JA, Asiegbu FO, de Dios Barajas-Lopez J, Blande D, Blokhina O, Blomster T, Broholm S, Brosché M, Cui F, Dardick C, Ehonen SE, Elomaa P, Escamez S, Fagerstedt KV, Fujii H, Gauthier A, Gollan PJ, Halimaa P, Heino PI, Himanen K, Hollender C, Kangasjärvi S, Kauppinen L, Kelleher CT, Kontunen-Soppela S, Koskinen JP, Kovalchuk A, Kärenlampi SO, Kärkönen AK, Lim KJ, Leppälä J, Macpherson L, Mikola J, Mouhu K, Mähönen AP, Niinemets Ü, Oksanen E, Overmyer K, Palva ET, Pazouki L, Pennanen V, Puhakainen T, Poczai P, Possen BJHM, Punkkinen M, Rahikainen MM, Rousi M, Ruonala R, van der Schoot C, Shapiguzov A, Sierla M, Sipilä TP, Sutela S, Teeri TH, Tervahauta AI, Vaattovaara A, Vahala J, Vetchinnikova L, Welling A, Wrzaczek M, Xu E, Paulin LG, Schulman AH, Lascoux M, Albert VA, Auvinen P, Helariutta Y, Kangasjärvi J.

Nat Genet. 2019 Jun 13. doi: 10.1038/s41588-019-0442-7. [Epub ahead of print] No abstract available.

PMID:
31197270
2.

An AP2/ERF transcription factor ERF139 coordinates xylem cell expansion and secondary cell wall deposition.

Wessels B, Seyfferth C, Escamez S, Vain T, Antos K, Vahala J, Delhomme N, Kangasjärvi J, Eder M, Felten J, Tuominen H.

New Phytol. 2019 May 24. doi: 10.1111/nph.15960. [Epub ahead of print]

PMID:
31125440
3.

Mechanistic insights into the evolution of DUF26-containing proteins in land plants.

Vaattovaara A, Brandt B, Rajaraman S, Safronov O, Veidenberg A, Luklová M, Kangasjärvi J, Löytynoja A, Hothorn M, Salojärvi J, Wrzaczek M.

Commun Biol. 2019 Feb 8;2:56. doi: 10.1038/s42003-019-0306-9. eCollection 2019.

4.

Arabidopsis RCD1 coordinates chloroplast and mitochondrial functions through interaction with ANAC transcription factors.

Shapiguzov A, Vainonen JP, Hunter K, Tossavainen H, Tiwari A, Järvi S, Hellman M, Aarabi F, Alseekh S, Wybouw B, Van Der Kelen K, Nikkanen L, Krasensky-Wrzaczek J, Sipari N, Keinänen M, Tyystjärvi E, Rintamäki E, De Rybel B, Salojärvi J, Van Breusegem F, Fernie AR, Brosché M, Permi P, Aro EM, Wrzaczek M, Kangasjärvi J.

Elife. 2019 Feb 15;8. pii: e43284. doi: 10.7554/eLife.43284.

5.

Interaction of methyl viologen-induced chloroplast and mitochondrial signalling in Arabidopsis.

Cui F, Brosché M, Shapiguzov A, He XQ, Vainonen JP, Leppälä J, Trotta A, Kangasjärvi S, Salojärvi J, Kangasjärvi J, Overmyer K.

Free Radic Biol Med. 2019 Apr;134:555-566. doi: 10.1016/j.freeradbiomed.2019.02.006. Epub 2019 Feb 6.

6.

Tissue-specific study across the stem reveals the chemistry and transcriptome dynamics of birch bark.

Alonso-Serra J, Safronov O, Lim KJ, Fraser-Miller SJ, Blokhina OB, Campilho A, Chong SL, Fagerstedt K, Haavikko R, Helariutta Y, Immanen J, Kangasjärvi J, Kauppila TJ, Lehtonen M, Ragni L, Rajaraman S, Räsänen RM, Safdari P, Tenkanen M, Yli-Kauhaluoma JT, Teeri TH, Strachan CJ, Nieminen K, Salojärvi J.

New Phytol. 2019 Jun;222(4):1816-1831. doi: 10.1111/nph.15725. Epub 2019 Mar 7.

PMID:
30724367
7.

Rapid Responses to Abiotic Stress: Priming the Landscape for the Signal Transduction Network.

Kollist H, Zandalinas SI, Sengupta S, Nuhkat M, Kangasjärvi J, Mittler R.

Trends Plant Sci. 2019 Jan;24(1):25-37. doi: 10.1016/j.tplants.2018.10.003. Epub 2018 Nov 3. Review.

8.

The Receptor-like Pseudokinase GHR1 Is Required for Stomatal Closure.

Sierla M, Hõrak H, Overmyer K, Waszczak C, Yarmolinsky D, Maierhofer T, Vainonen JP, Salojärvi J, Denessiouk K, Laanemets K, Tõldsepp K, Vahisalu T, Gauthier A, Puukko T, Paulin L, Auvinen P, Geiger D, Hedrich R, Kollist H, Kangasjärvi J.

Plant Cell. 2018 Nov;30(11):2813-2837. doi: 10.1105/tpc.18.00441. Epub 2018 Oct 25.

9.

Arabidopsis downy mildew effector HaRxL106 suppresses plant immunity by binding to RADICAL-INDUCED CELL DEATH1.

Wirthmueller L, Asai S, Rallapalli G, Sklenar J, Fabro G, Kim DS, Lintermann R, Jaspers P, Wrzaczek M, Kangasjärvi J, MacLean D, Menke FLH, Banfield MJ, Jones JDG.

New Phytol. 2018 Oct;220(1):232-248. doi: 10.1111/nph.15277.

10.

Reactive oxygen species signaling and stomatal movement in plant responses to drought stress and pathogen attack.

Qi J, Song CP, Wang B, Zhou J, Kangasjärvi J, Zhu JK, Gong Z.

J Integr Plant Biol. 2018 Sep;60(9):805-826. doi: 10.1111/jipb.12654. Epub 2018 Jul 3. Review.

PMID:
29660240
11.

Ethylene signaling induces gelatinous layers with typical features of tension wood in hybrid aspen.

Felten J, Vahala J, Love J, Gorzsás A, Rüggeberg M, Delhomme N, Leśniewska J, Kangasjärvi J, Hvidsten TR, Mellerowicz EJ, Sundberg B.

New Phytol. 2018 May;218(3):999-1014. doi: 10.1111/nph.15078. Epub 2018 Mar 12.

12.

The role of reactive oxygen species in the integration of temperature and light signals.

Krasensky-Wrzaczek J, Kangasjärvi J.

J Exp Bot. 2018 Jun 19;69(14):3347-3358. doi: 10.1093/jxb/ery074.

PMID:
29514325
13.

Reactive Oxygen Species in Plant Signaling.

Waszczak C, Carmody M, Kangasjärvi J.

Annu Rev Plant Biol. 2018 Apr 29;69:209-236. doi: 10.1146/annurev-arplant-042817-040322. Epub 2018 Feb 28. Review.

PMID:
29489394
14.

Reactive Oxygen Species, Photosynthesis, and Environment in the Regulation of Stomata.

Ehonen S, Yarmolinsky D, Kollist H, Kangasjärvi J.

Antioxid Redox Signal. 2019 Mar 20;30(9):1220-1237. doi: 10.1089/ars.2017.7455. Epub 2018 Jan 24.

PMID:
29237281
15.

1H, 13C and 15N NMR chemical shift assignments of A. thaliana RCD1 RST.

Tossavainen H, Hellman M, Vainonen JP, Kangasjärvi J, Permi P.

Biomol NMR Assign. 2017 Oct;11(2):207-210. doi: 10.1007/s12104-017-9749-4. Epub 2017 Jun 7.

PMID:
28593560
16.

The IDA-LIKE peptides IDL6 and IDL7 are negative modulators of stress responses in Arabidopsis thaliana.

Vie AK, Najafi J, Winge P, Cattan E, Wrzaczek M, Kangasjärvi J, Miller G, Brembu T, Bones AM.

J Exp Bot. 2017 Jun 15;68(13):3557-3571. doi: 10.1093/jxb/erx168.

17.

Detecting early signs of heat and drought stress in Phoenix dactylifera (date palm).

Safronov O, Kreuzwieser J, Haberer G, Alyousif MS, Schulze W, Al-Harbi N, Arab L, Ache P, Stempfl T, Kruse J, Mayer KX, Hedrich R, Rennenberg H, Salojärvi J, Kangasjärvi J.

PLoS One. 2017 Jun 1;12(6):e0177883. doi: 10.1371/journal.pone.0177883. eCollection 2017.

18.

Genome sequencing and population genomic analyses provide insights into the adaptive landscape of silver birch.

Salojärvi J, Smolander OP, Nieminen K, Rajaraman S, Safronov O, Safdari P, Lamminmäki A, Immanen J, Lan T, Tanskanen J, Rastas P, Amiryousefi A, Jayaprakash B, Kammonen JI, Hagqvist R, Eswaran G, Ahonen VH, Serra JA, Asiegbu FO, de Dios Barajas-Lopez J, Blande D, Blokhina O, Blomster T, Broholm S, Brosché M, Cui F, Dardick C, Ehonen SE, Elomaa P, Escamez S, Fagerstedt KV, Fujii H, Gauthier A, Gollan PJ, Halimaa P, Heino PI, Himanen K, Hollender C, Kangasjärvi S, Kauppinen L, Kelleher CT, Kontunen-Soppela S, Koskinen JP, Kovalchuk A, Kärenlampi SO, Kärkönen AK, Lim KJ, Leppälä J, Macpherson L, Mikola J, Mouhu K, Mähönen AP, Niinemets Ü, Oksanen E, Overmyer K, Palva ET, Pazouki L, Pennanen V, Puhakainen T, Poczai P, Possen BJHM, Punkkinen M, Rahikainen MM, Rousi M, Ruonala R, van der Schoot C, Shapiguzov A, Sierla M, Sipilä TP, Sutela S, Teeri TH, Tervahauta AI, Vaattovaara A, Vahala J, Vetchinnikova L, Welling A, Wrzaczek M, Xu E, Paulin LG, Schulman AH, Lascoux M, Albert VA, Auvinen P, Helariutta Y, Kangasjärvi J.

Nat Genet. 2017 Jun;49(6):904-912. doi: 10.1038/ng.3862. Epub 2017 May 8. Erratum in: Nat Genet. 2019 Jun 13;:.

PMID:
28481341
19.

Natural Variation in Arabidopsis Cvi-0 Accession Reveals an Important Role of MPK12 in Guard Cell CO2 Signaling.

Jakobson L, Vaahtera L, Tõldsepp K, Nuhkat M, Wang C, Wang YS, Hõrak H, Valk E, Pechter P, Sindarovska Y, Tang J, Xiao C, Xu Y, Gerst Talas U, García-Sosa AT, Kangasjärvi S, Maran U, Remm M, Roelfsema MR, Hu H, Kangasjärvi J, Loog M, Schroeder JI, Kollist H, Brosché M.

PLoS Biol. 2016 Dec 6;14(12):e2000322. doi: 10.1371/journal.pbio.2000322. eCollection 2016 Dec.

20.

Axillary buds are dwarfed shoots that tightly regulate GA pathway and GA-inducible 1,3-β-glucanase genes during branching in hybrid aspen.

Rinne PL, Paul LK, Vahala J, Kangasjärvi J, van der Schoot C.

J Exp Bot. 2016 Nov;67(21):5975-5991. Epub 2016 Oct 3.

21.

Plant PARPs, PARGs and PARP-like Proteins.

Vainonen JP, Shapiguzov A, Vaattovaara A, Kangasjärvi J.

Curr Protein Pept Sci. 2016;17(7):713-723. Review.

PMID:
27090905
22.

A Dominant Mutation in the HT1 Kinase Uncovers Roles of MAP Kinases and GHR1 in CO2-Induced Stomatal Closure.

Hõrak H, Sierla M, Tõldsepp K, Wang C, Wang YS, Nuhkat M, Valk E, Pechter P, Merilo E, Salojärvi J, Overmyer K, Loog M, Brosché M, Schroeder JI, Kangasjärvi J, Kollist H.

Plant Cell. 2016 Oct;28(10):2493-2509. Epub 2016 Sep 30.

23.

ROS signalling in a destabilised world: A molecular understanding of climate change.

Carmody M, Waszczak C, Idänheimo N, Saarinen T, Kangasjärvi J.

J Plant Physiol. 2016 Sep 20;203:69-83. doi: 10.1016/j.jplph.2016.06.008. Epub 2016 Jun 16. Review.

PMID:
27364884
24.

Lack of GLYCOLATE OXIDASE1, but Not GLYCOLATE OXIDASE2, Attenuates the Photorespiratory Phenotype of CATALASE2-Deficient Arabidopsis.

Kerchev P, Waszczak C, Lewandowska A, Willems P, Shapiguzov A, Li Z, Alseekh S, Mühlenbock P, Hoeberichts FA, Huang J, Van Der Kelen K, Kangasjärvi J, Fernie AR, De Smet R, Van de Peer Y, Messens J, Van Breusegem F.

Plant Physiol. 2016 Jul;171(3):1704-19. doi: 10.1104/pp.16.00359. Epub 2016 May 25.

25.

Reactive Oxygen Species in the Regulation of Stomatal Movements.

Sierla M, Waszczak C, Vahisalu T, Kangasjärvi J.

Plant Physiol. 2016 Jul;171(3):1569-80. doi: 10.1104/pp.16.00328. Epub 2016 Apr 21. Review.

26.

Spreading the news: subcellular and organellar reactive oxygen species production and signalling.

Mignolet-Spruyt L, Xu E, Idänheimo N, Hoeberichts FA, Mühlenbock P, Brosché M, Van Breusegem F, Kangasjärvi J.

J Exp Bot. 2016 Jun;67(13):3831-44. doi: 10.1093/jxb/erw080. Epub 2016 Mar 14. Review.

PMID:
26976816
27.

Long and short photoperiod buds in hybrid aspen share structural development and expression patterns of marker genes.

Rinne PL, Paul LK, Vahala J, Ruonala R, Kangasjärvi J, van der Schoot C.

J Exp Bot. 2015 Nov;66(21):6745-60. doi: 10.1093/jxb/erv380. Epub 2015 Aug 5.

28.

Large-Scale Phenomics Identifies Primary and Fine-Tuning Roles for CRKs in Responses Related to Oxidative Stress.

Bourdais G, Burdiak P, Gauthier A, Nitsch L, Salojärvi J, Rayapuram C, Idänheimo N, Hunter K, Kimura S, Merilo E, Vaattovaara A, Oracz K, Kaufholdt D, Pallon A, Anggoro DT, Glów D, Lowe J, Zhou J, Mohammadi O, Puukko T, Albert A, Lang H, Ernst D, Kollist H, Brosché M, Durner J, Borst JW, Collinge DB, Karpiński S, Lyngkjær MF, Robatzek S, Wrzaczek M, Kangasjärvi J; CRK Consortium.

PLoS Genet. 2015 Jul 21;11(7):e1005373. doi: 10.1371/journal.pgen.1005373. eCollection 2015 Jul.

29.

GRIM REAPER peptide binds to receptor kinase PRK5 to trigger cell death in Arabidopsis.

Wrzaczek M, Vainonen JP, Stael S, Tsiatsiani L, Help-Rinta-Rahko H, Gauthier A, Kaufholdt D, Bollhöner B, Lamminmäki A, Staes A, Gevaert K, Tuominen H, Van Breusegem F, Helariutta Y, Kangasjärvi J.

EMBO J. 2015 Jan 2;34(1):55-66. doi: 10.15252/embj.201488582. Epub 2014 Nov 14.

30.

Transcriptomics and functional genomics of ROS-induced cell death regulation by RADICAL-INDUCED CELL DEATH1.

Brosché M, Blomster T, Salojärvi J, Cui F, Sipari N, Leppälä J, Lamminmäki A, Tomai G, Narayanasamy S, Reddy RA, Keinänen M, Overmyer K, Kangasjärvi J.

PLoS Genet. 2014 Feb 13;10(2):e1004112. doi: 10.1371/journal.pgen.1004112. eCollection 2014 Feb.

31.

The Arabidopsis thaliana cysteine-rich receptor-like kinases CRK6 and CRK7 protect against apoplastic oxidative stress.

Idänheimo N, Gauthier A, Salojärvi J, Siligato R, Brosché M, Kollist H, Mähönen AP, Kangasjärvi J, Wrzaczek M.

Biochem Biophys Res Commun. 2014 Mar 7;445(2):457-62. doi: 10.1016/j.bbrc.2014.02.013. Epub 2014 Feb 12.

PMID:
24530916
32.

Plant signalling in acute ozone exposure.

Vainonen JP, Kangasjärvi J.

Plant Cell Environ. 2015 Feb;38(2):240-52. doi: 10.1111/pce.12273. Epub 2014 Feb 19. Review.

33.

Specificity in ROS signaling and transcript signatures.

Vaahtera L, Brosché M, Wrzaczek M, Kangasjärvi J.

Antioxid Redox Signal. 2014 Sep 20;21(9):1422-41. doi: 10.1089/ars.2013.5662. Epub 2014 Feb 6.

34.

The membrane-bound NAC transcription factor ANAC013 functions in mitochondrial retrograde regulation of the oxidative stress response in Arabidopsis.

De Clercq I, Vermeirssen V, Van Aken O, Vandepoele K, Murcha MW, Law SR, Inzé A, Ng S, Ivanova A, Rombaut D, van de Cotte B, Jaspers P, Van de Peer Y, Kangasjärvi J, Whelan J, Van Breusegem F.

Plant Cell. 2013 Sep;25(9):3472-90. doi: 10.1105/tpc.113.117168. Epub 2013 Sep 17.

35.

ROS signaling loops - production, perception, regulation.

Wrzaczek M, Brosché M, Kangasjärvi J.

Curr Opin Plant Biol. 2013 Oct;16(5):575-82. doi: 10.1016/j.pbi.2013.07.002. Epub 2013 Jul 20. Review.

PMID:
23876676
36.

A genome-wide screen for ethylene-induced ethylene response factors (ERFs) in hybrid aspen stem identifies ERF genes that modify stem growth and wood properties.

Vahala J, Felten J, Love J, Gorzsás A, Gerber L, Lamminmäki A, Kangasjärvi J, Sundberg B.

New Phytol. 2013 Oct;200(2):511-22. doi: 10.1111/nph.12386. Epub 2013 Jul 1.

37.

Non-cell-autonomous postmortem lignification of tracheary elements in Zinnia elegans.

Pesquet E, Zhang B, Gorzsás A, Puhakainen T, Serk H, Escamez S, Barbier O, Gerber L, Courtois-Moreau C, Alatalo E, Paulin L, Kangasjärvi J, Sundberg B, Goffner D, Tuominen H.

Plant Cell. 2013 Apr;25(4):1314-28. doi: 10.1105/tpc.113.110593. Epub 2013 Apr 9.

38.

ROS-talk - how the apoplast, the chloroplast, and the nucleus get the message through.

Shapiguzov A, Vainonen JP, Wrzaczek M, Kangasjärvi J.

Front Plant Sci. 2012 Dec 27;3:292. doi: 10.3389/fpls.2012.00292. eCollection 2012.

39.

Apoplastic and chloroplastic redox signaling networks in plant stress responses.

Sierla M, Rahikainen M, Salojärvi J, Kangasjärvi J, Kangasjärvi S.

Antioxid Redox Signal. 2013 Jun 1;18(16):2220-39. doi: 10.1089/ars.2012.5016. Epub 2013 Jan 8.

PMID:
23157163
40.

Mutations in the SLAC1 anion channel slow stomatal opening and severely reduce K+ uptake channel activity via enhanced cytosolic [Ca2+] and increased Ca2+ sensitivity of K+ uptake channels.

Laanemets K, Wang YF, Lindgren O, Wu J, Nishimura N, Lee S, Caddell D, Merilo E, Brosche M, Kilk K, Soomets U, Kangasjärvi J, Schroeder JI, Kollist H.

New Phytol. 2013 Jan;197(1):88-98. doi: 10.1111/nph.12008. Epub 2012 Nov 5.

41.

Targeted retrieval of gene expression measurements using regulatory models.

Georgii E, Salojärvi J, Brosché M, Kangasjärvi J, Kaski S.

Bioinformatics. 2012 Sep 15;28(18):2349-56. Epub 2012 Jun 27.

PMID:
22743225
42.

Reconstitution of abscisic acid activation of SLAC1 anion channel by CPK6 and OST1 kinases and branched ABI1 PP2C phosphatase action.

Brandt B, Brodsky DE, Xue S, Negi J, Iba K, Kangasjärvi J, Ghassemian M, Stephan AB, Hu H, Schroeder JI.

Proc Natl Acad Sci U S A. 2012 Jun 26;109(26):10593-8. doi: 10.1073/pnas.1116590109. Epub 2012 Jun 11.

43.

Low antioxidant concentrations impact on multiple signalling pathways in Arabidopsis thaliana partly through NPR1.

Brosché M, Kangasjärvi J.

J Exp Bot. 2012 Mar;63(5):1849-61. doi: 10.1093/jxb/err358. Epub 2012 Jan 2.

44.

RCD1-DREB2A interaction in leaf senescence and stress responses in Arabidopsis thaliana.

Vainonen JP, Jaspers P, Wrzaczek M, Lamminmäki A, Reddy RA, Vaahtera L, Brosché M, Kangasjärvi J.

Biochem J. 2012 Mar 15;442(3):573-81. doi: 10.1042/BJ20111739.

PMID:
22150398
45.

Apoplastic reactive oxygen species transiently decrease auxin signaling and cause stress-induced morphogenic response in Arabidopsis.

Blomster T, Salojärvi J, Sipari N, Brosché M, Ahlfors R, Keinänen M, Overmyer K, Kangasjärvi J.

Plant Physiol. 2011 Dec;157(4):1866-83. doi: 10.1104/pp.111.181883. Epub 2011 Oct 17.

46.

Comparative study of transcriptional and physiological responses to salinity stress in two contrasting Populus alba L. genotypes.

Beritognolo I, Harfouche A, Brilli F, Prosperini G, Gaudet M, Brosché M, Salani F, Kuzminsky E, Auvinen P, Paulin L, Kangasjärvi J, Loreto F, Valentini R, Mugnozza GS, Sabatti M.

Tree Physiol. 2011 Dec;31(12):1335-55. doi: 10.1093/treephys/tpr083. Epub 2011 Sep 12.

PMID:
21911439
47.

Chilling of dormant buds hyperinduces FLOWERING LOCUS T and recruits GA-inducible 1,3-beta-glucanases to reopen signal conduits and release dormancy in Populus.

Rinne PL, Welling A, Vahala J, Ripel L, Ruonala R, Kangasjärvi J, van der Schoot C.

Plant Cell. 2011 Jan;23(1):130-46. doi: 10.1105/tpc.110.081307. Epub 2011 Jan 31.

48.

Linking the salt transcriptome with physiological responses of a salt-resistant Populus species as a strategy to identify genes important for stress acclimation.

Brinker M, Brosché M, Vinocur B, Abo-Ogiala A, Fayyaz P, Janz D, Ottow EA, Cullmann AD, Saborowski J, Kangasjärvi J, Altman A, Polle A.

Plant Physiol. 2010 Dec;154(4):1697-709. doi: 10.1104/pp.110.164152. Epub 2010 Oct 19.

49.

The transcription factor interacting protein RCD1 contains a novel conserved domain.

Jaspers P, Brosché M, Overmyer K, Kangasjärvi J.

Plant Signal Behav. 2010 Jan;5(1):78-80.

50.

Transcriptional regulation of the CRK/DUF26 group of receptor-like protein kinases by ozone and plant hormones in Arabidopsis.

Wrzaczek M, Brosché M, Salojärvi J, Kangasjärvi S, Idänheimo N, Mersmann S, Robatzek S, Karpiński S, Karpińska B, Kangasjärvi J.

BMC Plant Biol. 2010 May 25;10:95. doi: 10.1186/1471-2229-10-95.

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