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Root exudation of mature beech forests across a nutrient availability gradient: the role of root morphology and fungal activity.

Meier IC, Tückmantel T, Heitkötter J, Müller K, Preusser S, Wrobel TJ, Kandeler E, Marschner B, Leuschner C.

New Phytol. 2020 Apr;226(2):583-594. doi: 10.1111/nph.16389. Epub 2020 Jan 28.


Phosphorus-acquisition strategies of canola, wheat and barley in soil amended with sewage sludges.

Nobile C, Houben D, Michel E, Firmin S, Lambers H, Kandeler E, Faucon MP.

Sci Rep. 2019 Oct 16;9(1):14878. doi: 10.1038/s41598-019-51204-x.


Maize Inoculation with Microbial Consortia: Contrasting Effects on Rhizosphere Activities, Nutrient Acquisition and Early Growth in Different Soils.

Bradáčová K, Sittinger M, Tietz K, Neuhäuser B, Kandeler E, Berger N, Ludewig U, Neumann G.

Microorganisms. 2019 Sep 7;7(9). pii: E329. doi: 10.3390/microorganisms7090329.


Enhanced tomato plant growth in soil under reduced P supply through microbial inoculants and microbiome shifts.

Eltlbany N, Baklawa M, Ding GC, Nassal D, Weber N, Kandeler E, Neumann G, Ludewig U, van Overbeek L, Smalla K.

FEMS Microbiol Ecol. 2019 Sep 1;95(9). pii: fiz124. doi: 10.1093/femsec/fiz124.


Bacterial colonization of minerals in grassland soils is selective and highly dynamic.

Vieira S, Sikorski J, Gebala A, Boeddinghaus RS, Marhan S, Rennert T, Kandeler E, Overmann J.

Environ Microbiol. 2020 Mar;22(3):917-933. doi: 10.1111/1462-2920.14751. Epub 2019 Aug 6.


Functional Traits and Spatio-Temporal Structure of a Major Group of Soil Protists (Rhizaria: Cercozoa) in a Temperate Grassland.

Fiore-Donno AM, Richter-Heitmann T, Degrune F, Dumack K, Regan KM, Marhan S, Boeddinghaus RS, Rillig MC, Friedrich MW, Kandeler E, Bonkowski M.

Front Microbiol. 2019 Jun 11;10:1332. doi: 10.3389/fmicb.2019.01332. eCollection 2019. Erratum in: Front Microbiol. 2019 Jul 16;10:1654.


Unraveling spatiotemporal variability of arbuscular mycorrhizal fungi in a temperate grassland plot.

Goldmann K, Boeddinghaus RS, Klemmer S, Regan KM, Heintz-Buschart A, Fischer M, Prati D, Piepho HP, Berner D, Marhan S, Kandeler E, Buscot F, Wubet T.

Environ Microbiol. 2020 Mar;22(3):873-888. doi: 10.1111/1462-2920.14653. Epub 2019 Jun 27.


Assessment of biochar and zero-valent iron for in-situ remediation of chromated copper arsenate contaminated soil.

Frick H, Tardif S, Kandeler E, Holm PE, Brandt KK.

Sci Total Environ. 2019 Mar 10;655:414-422. doi: 10.1016/j.scitotenv.2018.11.193. Epub 2018 Nov 14.


Forest Soil Phosphorus Resources and Fertilization Affect Ectomycorrhizal Community Composition, Beech P Uptake Efficiency, and Photosynthesis.

Zavišić A, Yang N, Marhan S, Kandeler E, Polle A.

Front Plant Sci. 2018 Apr 13;9:463. doi: 10.3389/fpls.2018.00463. eCollection 2018.


Disentangling the root- and detritus-based food chain in the micro-food web of an arable soil by plant removal.

Glavatska O, Müller K, Butenschoen O, Schmalwasser A, Kandeler E, Scheu S, Totsche KU, Ruess L.

PLoS One. 2017 Jul 13;12(7):e0180264. doi: 10.1371/journal.pone.0180264. eCollection 2017.


Inferring interactions in complex microbial communities from nucleotide sequence data and environmental parameters.

Shang Y, Sikorski J, Bonkowski M, Fiore-Donno AM, Kandeler E, Marhan S, Boeddinghaus RS, Solly EF, Schrumpf M, Schöning I, Wubet T, Buscot F, Overmann J.

PLoS One. 2017 Mar 13;12(3):e0173765. doi: 10.1371/journal.pone.0173765. eCollection 2017.


Tracing of Two Pseudomonas Strains in the Root and Rhizoplane of Maize, as Related to Their Plant Growth-Promoting Effect in Contrasting Soils.

Mosimann C, Oberhänsli T, Ziegler D, Nassal D, Kandeler E, Boller T, Mäder P, Thonar C.

Front Microbiol. 2017 Jan 10;7:2150. doi: 10.3389/fmicb.2016.02150. eCollection 2016.


Comparison and standardization of soil enzyme assay for meaningful data interpretation.

Deng S, Dick R, Freeman C, Kandeler E, Weintraub MN.

J Microbiol Methods. 2017 Feb;133:32-34. doi: 10.1016/j.mimet.2016.12.013. Epub 2016 Dec 18.


Rhizosphere Organic Anions Play a Minor Role in Improving Crop Species' Ability to Take Up Residual Phosphorus (P) in Agricultural Soils Low in P Availability.

Wang Y, Krogstad T, Clarke JL, Hallama M, Øgaard AF, Eich-Greatorex S, Kandeler E, Clarke N.

Front Plant Sci. 2016 Nov 7;7:1664. eCollection 2016.


Resource Partitioning between Bacteria, Fungi, and Protists in the Detritusphere of an Agricultural Soil.

Kramer S, Dibbern D, Moll J, Huenninghaus M, Koller R, Krueger D, Marhan S, Urich T, Wubet T, Bonkowski M, Buscot F, Lueders T, Kandeler E.

Front Microbiol. 2016 Sep 26;7:1524. eCollection 2016.


An inter-laboratory comparison of gaseous and liquid fumigation based methods for measuring microbial phosphorus (Pmic) in forest soils with differing P stocks.

Bergkemper F, Bünemann EK, Hauenstein S, Heuck C, Kandeler E, Krüger J, Marhan S, Mészáros É, Nassal D, Nassal P, Oelmann Y, Pistocchi C, Schloter M, Spohn M, Talkner U, Zederer DP, Schulz S.

J Microbiol Methods. 2016 Sep;128:66-68. doi: 10.1016/j.mimet.2016.07.006. Epub 2016 Jul 12.


The impact of chemical pollution on the resilience of soils under multiple stresses: A conceptual framework for future research.

Schaeffer A, Amelung W, Hollert H, Kaestner M, Kandeler E, Kruse J, Miltner A, Ottermanns R, Pagel H, Peth S, Poll C, Rambold G, Schloter M, Schulz S, Streck T, Roß-Nickoll M.

Sci Total Environ. 2016 Oct 15;568:1076-1085. doi: 10.1016/j.scitotenv.2016.06.161. Epub 2016 Jun 30.


Estimates of Soil Bacterial Ribosome Content and Diversity Are Significantly Affected by the Nucleic Acid Extraction Method Employed.

Wüst PK, Nacke H, Kaiser K, Marhan S, Sikorski J, Kandeler E, Daniel R, Overmann J.

Appl Environ Microbiol. 2016 Apr 18;82(9):2595-2607. doi: 10.1128/AEM.00019-16. Print 2016 May.


Spatial Interaction of Archaeal Ammonia-Oxidizers and Nitrite-Oxidizing Bacteria in an Unfertilized Grassland Soil.

Stempfhuber B, Richter-Heitmann T, Regan KM, Kölbl A, Wüst PK, Marhan S, Sikorski J, Overmann J, Friedrich MW, Kandeler E, Schloter M.

Front Microbiol. 2016 Jan 22;6:1567. doi: 10.3389/fmicb.2015.01567. eCollection 2015.


Nicosulfuron application in agricultural soils drives the selection towards NS-tolerant microorganisms harboring various levels of sensitivity to nicosulfuron.

Petric I, Karpouzas DG, Bru D, Udikovic-Kolic N, Kandeler E, Djuric S, Martin-Laurent F.

Environ Sci Pollut Res Int. 2016 Mar;23(5):4320-33. doi: 10.1007/s11356-015-5645-6. Epub 2015 Oct 31.


Effects of warming and drought on potential N2O emissions and denitrifying bacteria abundance in grasslands with different land-use.

Keil D, Niklaus PA, von Riedmatten LR, Boeddinghaus RS, Dormann CF, Scherer-Lorenzen M, Kandeler E, Marhan S.

FEMS Microbiol Ecol. 2015 Jul;91(7). pii: fiv066. doi: 10.1093/femsec/fiv066. Epub 2015 Jun 19.


Evidence for the importance of litter as a co-substrate for MCPA dissipation in an agricultural soil.

Saleh O, Pagel H, Enowashu E, Devers M, Martin-Laurent F, Streck T, Kandeler E, Poll C.

Environ Sci Pollut Res Int. 2016 Mar;23(5):4164-75. doi: 10.1007/s11356-015-4633-1. Epub 2015 May 7.


Resource Type and Availability Regulate Fungal Communities Along Arable Soil Profiles.

Moll J, Goldmann K, Kramer S, Hempel S, Kandeler E, Marhan S, Ruess L, Krüger D, Buscot F.

Microb Ecol. 2015 Aug;70(2):390-9. doi: 10.1007/s00248-015-0569-8. Epub 2015 Feb 17.


Reply to Byrnes et al.: Aggregation can obscure understanding of ecosystem multifunctionality.

Bradford MA, Wood SA, Bardgett RD, Black HI, Bonkowski M, Eggers T, Grayston SJ, Kandeler E, Manning P, Setälä H, Jones TH.

Proc Natl Acad Sci U S A. 2014 Dec 23;111(51):E5491. doi: 10.1073/pnas.1421203112. Epub 2014 Dec 5. No abstract available.


Discontinuity in the responses of ecosystem processes and multifunctionality to altered soil community composition.

Bradford MA, Wood SA, Bardgett RD, Black HI, Bonkowski M, Eggers T, Grayston SJ, Kandeler E, Manning P, Setälä H, Jones TH.

Proc Natl Acad Sci U S A. 2014 Oct 7;111(40):14478-83. doi: 10.1073/pnas.1413707111. Epub 2014 Sep 22.


Cover crops influence soil microorganisms and phytoextraction of copper from a moderately contaminated vineyard.

Mackie KA, Schmidt HP, Müller T, Kandeler E.

Sci Total Environ. 2014 Dec 1;500-501:34-43. doi: 10.1016/j.scitotenv.2014.08.091. Epub 2014 Sep 15.


Different land use intensities in grassland ecosystems drive ecology of microbial communities involved in nitrogen turnover in soil.

Meyer A, Focks A, Radl V, Keil D, Welzl G, Schöning I, Boch S, Marhan S, Kandeler E, Schloter M.

PLoS One. 2013 Sep 6;8(9):e73536. doi: 10.1371/journal.pone.0073536. eCollection 2013.


Soil management of copper mine tailing soils--sludge amendment and tree vegetation could improve biological soil quality.

Asensio V, Covelo EF, Kandeler E.

Sci Total Environ. 2013 Jul 1;456-457:82-90. doi: 10.1016/j.scitotenv.2013.03.061. Epub 2013 Apr 11.


Succession of bacterial and fungal 4-chloro-2-methylphenoxyacetic acid degraders at the soil-litter interface.

Ditterich F, Poll C, Pagel H, Babin D, Smalla K, Horn MA, Streck T, Kandeler E.

FEMS Microbiol Ecol. 2013 Oct;86(1):85-100. doi: 10.1111/1574-6941.12131. Epub 2013 May 2.


ECOFUN-MICROBIODIV: an FP7 European project for developing and evaluating innovative tools for assessing the impact of pesticides on soil functional microbial diversity--towards new pesticide registration regulation?

Martin-Laurent F, Kandeler E, Petric I, Djuric S, Karpouzas DG.

Environ Sci Pollut Res Int. 2013 Feb;20(2):1203-5. doi: 10.1007/s11356-012-1368-0. Epub 2012 Dec 8. No abstract available.


Impacts of temperature increase and change in precipitation pattern on crop yield and yield quality of barley.

Högy P, Poll C, Marhan S, Kandeler E, Fangmeier A.

Food Chem. 2013 Feb 15;136(3-4):1470-7. doi: 10.1016/j.foodchem.2012.09.056. Epub 2012 Sep 28.


General relationships between abiotic soil properties and soil biota across spatial scales and different land-use types.

Birkhofer K, Schöning I, Alt F, Herold N, Klarner B, Maraun M, Marhan S, Oelmann Y, Wubet T, Yurkov A, Begerow D, Berner D, Buscot F, Daniel R, Diekötter T, Ehnes RB, Erdmann G, Fischer C, Foesel B, Groh J, Gutknecht J, Kandeler E, Lang C, Lohaus G, Meyer A, Nacke H, Näther A, Overmann J, Polle A, Pollierer MM, Scheu S, Schloter M, Schulze ED, Schulze W, Weinert J, Weisser WW, Wolters V, Schrumpf M.

PLoS One. 2012;7(8):e43292. doi: 10.1371/journal.pone.0043292. Epub 2012 Aug 22.


Development of a primer system to study abundance and diversity of the gene coding for alanine aminopeptidase pepN gene in Gram-negative soil bacteria.

Enowashu E, Kandeler E, Schloter M, Rasche F, Engel M.

J Microbiol Methods. 2012 Oct;91(1):14-21. doi: 10.1016/j.mimet.2012.07.001. Epub 2012 Jul 14.


Remediation of copper in vineyards--a mini review.

Mackie KA, Müller T, Kandeler E.

Environ Pollut. 2012 Aug;167:16-26. doi: 10.1016/j.envpol.2012.03.023. Epub 2012 Apr 21. Review.


Influence of land-use intensity on the spatial distribution of N-cycling microorganisms in grassland soils.

Keil D, Meyer A, Berner D, Poll C, Schützenmeister A, Piepho HP, Vlasenko A, Philippot L, Schloter M, Kandeler E, Marhan S.

FEMS Microbiol Ecol. 2011 Jul;77(1):95-106. doi: 10.1111/j.1574-6941.2011.01091.x. Epub 2011 Apr 15.


An assessment of potential public health risk associated with the extended survival of indicator and pathogenic bacteria in freshwater lake sediments.

Chandran A, Varghese S, Kandeler E, Thomas A, Hatha M, Mazumder A.

Int J Hyg Environ Health. 2011 Jun;214(3):258-64. doi: 10.1016/j.ijheh.2011.01.002. Epub 2011 Feb 11.


Abundance and activity of nitrate reducers in an arable soil are more affected by temporal variation and soil depth than by elevated atmospheric [CO2].

Marhan S, Philippot L, Bru D, Rudolph S, Franzaring J, Högy P, Fangmeier A, Kandeler E.

FEMS Microbiol Ecol. 2011 May;76(2):209-19. doi: 10.1111/j.1574-6941.2011.01048.x. Epub 2011 Feb 14.


Distribution of high bacterial taxa across the chronosequence of two alpine glacier forelands.

Philippot L, Tscherko D, Bru D, Kandeler E.

Microb Ecol. 2011 Feb;61(2):303-12. doi: 10.1007/s00248-010-9754-y. Epub 2010 Oct 9.


Functional microbial community response to nutrient pulses by artificial groundwater recharge practice in surface soils and subsoils.

Schütz K, Kandeler E, Nagel P, Scheu S, Ruess L.

FEMS Microbiol Ecol. 2010 Jun;72(3):445-55. doi: 10.1111/j.1574-6941.2010.00855.x.


Small-scale diversity and succession of fungi in the detritusphere of rye residues.

Poll C, Brune T, Begerow D, Kandeler E.

Microb Ecol. 2010 Jan;59(1):130-40. doi: 10.1007/s00248-009-9541-9. Epub 2009 Jun 4.


Response of total and nitrate-dissimilating bacteria to reduced N deposition in a spruce forest soil profile.

Kandeler E, Brune T, Enowashu E, Dörr N, Guggenberger G, Lamersdorf N, Philippot L.

FEMS Microbiol Ecol. 2009 Mar;67(3):444-54. doi: 10.1111/j.1574-6941.2008.00632.x.


Flooding forested groundwater recharge areas modifies microbial communities from top soil to groundwater table.

Schütz K, Nagel P, Vetter W, Kandeler E, Ruess L.

FEMS Microbiol Ecol. 2009 Jan;67(1):171-82. doi: 10.1111/j.1574-6941.2008.00608.x. Epub 2008 Nov 4.


Responses to iron limitation in Hordeum vulgare L. as affected by the atmospheric CO2 concentration.

Haase S, Rothe A, Kania A, Wasaki J, Römheld V, Engels C, Kandeler E, Neumann G.

J Environ Qual. 2008 May 2;37(3):1254-62. doi: 10.2134/jeq2006.0136. Print 2008 May-Jun.


Interactive effects of plant species diversity and elevated CO2 on soil biota and nutrient cycling.

Niklaus PA, Alphei J, Kampichler C, Kandeler E, Körner C, Tscherko D, Wohlfender M.

Ecology. 2007 Dec;88(12):3153-63.


Low amounts of herbivory by root-knot nematodes affect microbial community dynamics and carbon allocation in the rhizosphere.

Poll J, Marhan S, Haase S, Hallmann J, Kandeler E, Ruess L.

FEMS Microbiol Ecol. 2007 Dec;62(3):268-79. Epub 2007 Oct 3.


Quantification of bacterial RubisCO genes in soils by cbbL targeted real-time PCR.

Selesi D, Pattis I, Schmid M, Kandeler E, Hartmann A.

J Microbiol Methods. 2007 Jun;69(3):497-503. Epub 2007 Mar 16.


Abundance of narG, nirS, nirK, and nosZ genes of denitrifying bacteria during primary successions of a glacier foreland.

Kandeler E, Deiglmayr K, Tscherko D, Bru D, Philippot L.

Appl Environ Microbiol. 2006 Sep;72(9):5957-62.


Decoupling the direct and indirect effects of nitrogen deposition on ecosystem function.

Manning P, Newington JE, Robson HR, Saunders M, Eggers T, Bradford MA, Bardgett RD, Bonkowski M, Ellis RJ, Gange AC, Grayston SJ, Kandeler E, Marhan S, Reid E, Tscherko D, Godfray HC, Rees M.

Ecol Lett. 2006 Sep;9(9):1015-24.


Microbial succession of nitrate-reducing bacteria in the rhizosphere of Poa alpina across a glacier foreland in the Central Alps.

Deiglmayr K, Philippot L, Tscherko D, Kandeler E.

Environ Microbiol. 2006 Sep;8(9):1600-12.


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