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Items: 12

1.

Big Data Approaches to Phenotyping Acute Ischemic Stroke Using Automated Lesion Segmentation of Multi-Center Magnetic Resonance Imaging Data.

Wu O, Winzeck S, Giese AK, Hancock BL, Etherton MR, Bouts MJRJ, Donahue K, Schirmer MD, Irie RE, Mocking SJT, McIntosh EC, Bezerra R, Kamnitsas K, Frid P, Wasselius J, Cole JW, Xu H, Holmegaard L, Jiménez-Conde J, Lemmens R, Lorentzen E, McArdle PF, Meschia JF, Roquer J, Rundek T, Sacco RL, Schmidt R, Sharma P, Slowik A, Stanne TM, Thijs V, Vagal A, Woo D, Bevan S, Kittner SJ, Mitchell BD, Rosand J, Worrall BB, Jern C, Lindgren AG, Maguire J, Rost NS; MRI-GENIE and GISCOME Investigators.

Stroke. 2019 Jun 10:STROKEAHA119025373. doi: 10.1161/STROKEAHA.119.025373. [Epub ahead of print]

PMID:
31177973
2.

Ensemble of Convolutional Neural Networks Improves Automated Segmentation of Acute Ischemic Lesions Using Multiparametric Diffusion-Weighted MRI.

Winzeck S, Mocking SJT, Bezerra R, Bouts MJRJ, McIntosh EC, Diwan I, Garg P, Chutinet A, Kimberly WT, Copen WA, Schaefer PW, Ay H, Singhal AB, Kamnitsas K, Glocker B, Sorensen AG, Wu O.

AJNR Am J Neuroradiol. 2019 Jun;40(6):938-945. doi: 10.3174/ajnr.A6077. Epub 2019 May 30.

PMID:
31147354
3.

Evaluating reinforcement learning agents for anatomical landmark detection.

Alansary A, Oktay O, Li Y, Folgoc LL, Hou B, Vaillant G, Kamnitsas K, Vlontzos A, Glocker B, Kainz B, Rueckert D.

Med Image Anal. 2019 Apr;53:156-164. doi: 10.1016/j.media.2019.02.007. Epub 2019 Feb 14.

PMID:
30784956
4.

Regional brain morphometry in patients with traumatic brain injury based on acute- and chronic-phase magnetic resonance imaging.

Ledig C, Kamnitsas K, Koikkalainen J, Posti JP, Takala RSK, Katila A, Frantzén J, Ala-Seppälä H, Kyllönen A, Maanpää HR, Tallus J, Lötjönen J, Glocker B, Tenovuo O, Rueckert D.

PLoS One. 2017 Nov 28;12(11):e0188152. doi: 10.1371/journal.pone.0188152. eCollection 2017.

5.

Anatomically Constrained Neural Networks (ACNNs): Application to Cardiac Image Enhancement and Segmentation.

Oktay O, Ferrante E, Kamnitsas K, Heinrich M, Bai W, Caballero J, Cook SA, de Marvao A, Dawes T, O'Regan DP, Kainz B, Glocker B, Rueckert D.

IEEE Trans Med Imaging. 2018 Feb;37(2):384-395. doi: 10.1109/TMI.2017.2743464. Epub 2017 Sep 26.

6.

Fully automatic, multiorgan segmentation in normal whole body magnetic resonance imaging (MRI), using classification forests (CFs), convolutional neural networks (CNNs), and a multi-atlas (MA) approach.

Lavdas I, Glocker B, Kamnitsas K, Rueckert D, Mair H, Sandhu A, Taylor SA, Aboagye EO, Rockall AG.

Med Phys. 2017 Oct;44(10):5210-5220. doi: 10.1002/mp.12492. Epub 2017 Aug 31.

7.

SonoNet: Real-Time Detection and Localisation of Fetal Standard Scan Planes in Freehand Ultrasound.

Baumgartner CF, Kamnitsas K, Matthew J, Fletcher TP, Smith S, Koch LM, Kainz B, Rueckert D.

IEEE Trans Med Imaging. 2017 Nov;36(11):2204-2215. doi: 10.1109/TMI.2017.2712367. Epub 2017 Jul 11.

8.

Reverse Classification Accuracy: Predicting Segmentation Performance in the Absence of Ground Truth.

Valindria VV, Lavdas I, Bai W, Kamnitsas K, Aboagye EO, Rockall AG, Rueckert D, Glocker B.

IEEE Trans Med Imaging. 2017 Aug;36(8):1597-1606. doi: 10.1109/TMI.2017.2665165. Epub 2017 Apr 17.

9.

Multi-channel MRI segmentation of eye structures and tumors using patient-specific features.

Ciller C, De Zanet S, Kamnitsas K, Maeder P, Glocker B, Munier FL, Rueckert D, Thiran JP, Bach Cuadra M, Sznitman R.

PLoS One. 2017 Mar 28;12(3):e0173900. doi: 10.1371/journal.pone.0173900. eCollection 2017.

10.

Efficient multi-scale 3D CNN with fully connected CRF for accurate brain lesion segmentation.

Kamnitsas K, Ledig C, Newcombe VFJ, Simpson JP, Kane AD, Menon DK, Rueckert D, Glocker B.

Med Image Anal. 2017 Feb;36:61-78. doi: 10.1016/j.media.2016.10.004. Epub 2016 Oct 29.

11.

DeepCut: Object Segmentation From Bounding Box Annotations Using Convolutional Neural Networks.

Rajchl M, Lee MC, Oktay O, Kamnitsas K, Passerat-Palmbach J, Bai W, Damodaram M, Rutherford MA, Hajnal JV, Kainz B, Rueckert D.

IEEE Trans Med Imaging. 2017 Feb;36(2):674-683. doi: 10.1109/TMI.2016.2621185. Epub 2016 Nov 9.

12.

ISLES 2015 - A public evaluation benchmark for ischemic stroke lesion segmentation from multispectral MRI.

Maier O, Menze BH, von der Gablentz J, Ḧani L, Heinrich MP, Liebrand M, Winzeck S, Basit A, Bentley P, Chen L, Christiaens D, Dutil F, Egger K, Feng C, Glocker B, Götz M, Haeck T, Halme HL, Havaei M, Iftekharuddin KM, Jodoin PM, Kamnitsas K, Kellner E, Korvenoja A, Larochelle H, Ledig C, Lee JH, Maes F, Mahmood Q, Maier-Hein KH, McKinley R, Muschelli J, Pal C, Pei L, Rangarajan JR, Reza SMS, Robben D, Rueckert D, Salli E, Suetens P, Wang CW, Wilms M, Kirschke JS, Kr Amer UM, Münte TF, Schramm P, Wiest R, Handels H, Reyes M.

Med Image Anal. 2017 Jan;35:250-269. doi: 10.1016/j.media.2016.07.009. Epub 2016 Jul 21.

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