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Items: 19

1.

Chromatin loop anchors are associated with genome instability in cancer and recombination hotspots in the germline.

Kaiser VB, Semple CA.

Genome Biol. 2018 Jul 30;19(1):101. doi: 10.1186/s13059-018-1483-4.

2.

When TADs go bad: chromatin structure and nuclear organisation in human disease.

Kaiser VB, Semple CA.

F1000Res. 2017 Mar 24;6. pii: F1000 Faculty Rev-314. doi: 10.12688/f1000research.10792.1. eCollection 2017. Review.

3.

Mutational Biases Drive Elevated Rates of Substitution at Regulatory Sites across Cancer Types.

Kaiser VB, Taylor MS, Semple CA.

PLoS Genet. 2016 Aug 4;12(8):e1006207. doi: 10.1371/journal.pgen.1006207. eCollection 2016 Aug.

4.

Homozygous loss-of-function variants in European cosmopolitan and isolate populations.

Kaiser VB, Svinti V, Prendergast JG, Chau YY, Campbell A, Patarcic I, Barroso I, Joshi PK, Hastie ND, Miljkovic A, Taylor MS; Generation Scotland; UK10K, Enroth S, Memari Y, Kolb-Kokocinski A, Wright AF, Gyllensten U, Durbin R, Rudan I, Campbell H, Polašek O, Johansson Å, Sauer S, Porteous DJ, Fraser RM, Drake C, Vitart V, Hayward C, Semple CA, Wilson JF.

Hum Mol Genet. 2015 Oct 1;24(19):5464-74. doi: 10.1093/hmg/ddv272. Epub 2015 Jul 14.

5.
6.

The epigenome of evolving Drosophila neo-sex chromosomes: dosage compensation and heterochromatin formation.

Zhou Q, Ellison CE, Kaiser VB, Alekseyenko AA, Gorchakov AA, Bachtrog D.

PLoS Biol. 2013 Nov;11(11):e1001711. doi: 10.1371/journal.pbio.1001711. Epub 2013 Nov 12.

7.

Conservation and de novo acquisition of dosage compensation on newly evolved sex chromosomes in Drosophila.

Alekseyenko AA, Ellison CE, Gorchakov AA, Zhou Q, Kaiser VB, Toda N, Walton Z, Peng S, Park PJ, Bachtrog D, Kuroda MI.

Genes Dev. 2013 Apr 15;27(8):853-8. doi: 10.1101/gad.215426.113.

8.

Sex-biased gene expression at homomorphic sex chromosomes in emus and its implication for sex chromosome evolution.

Vicoso B, Kaiser VB, Bachtrog D.

Proc Natl Acad Sci U S A. 2013 Apr 16;110(16):6453-8. doi: 10.1073/pnas.1217027110. Epub 2013 Apr 1.

9.

Nonrandom gene loss from the Drosophila miranda neo-Y chromosome.

Kaiser VB, Zhou Q, Bachtrog D.

Genome Biol Evol. 2011;3:1329-37. doi: 10.1093/gbe/evr103. Epub 2011 Oct 10.

10.

Evolution of sex chromosomes in insects.

Kaiser VB, Bachtrog D.

Annu Rev Genet. 2010;44:91-112. doi: 10.1146/annurev-genet-102209-163600. Review.

11.

Gene loss on Y chromosomes: a consequence of purifying selection?

Kaiser VB.

Fly (Austin). 2010 Oct-Dec;4(4):270-2. Epub 2010 Oct 15.

PMID:
20657178
12.

A new plant sex-linked gene with high sequence diversity and possible introgression of the X copy.

Kaiser VB, Bergero R, Charlesworth D.

Heredity (Edinb). 2011 Feb;106(2):339-47. doi: 10.1038/hdy.2010.76. Epub 2010 Jun 16.

13.

Nucleotide diversity in Silene latifolia autosomal and sex-linked genes.

Qiu S, Bergero R, Forrest A, Kaiser VB, Charlesworth D.

Proc Biol Sci. 2010 Nov 7;277(1698):3283-90. doi: 10.1098/rspb.2010.0606. Epub 2010 Jun 2.

14.

Muller's ratchet and the degeneration of the Drosophila miranda neo-Y chromosome.

Kaiser VB, Charlesworth B.

Genetics. 2010 May;185(1):339-48. doi: 10.1534/genetics.109.112789. Epub 2010 Mar 9.

15.

Genetic recombination and molecular evolution.

Charlesworth B, Betancourt AJ, Kaiser VB, Gordo I.

Cold Spring Harb Symp Quant Biol. 2009;74:177-86. doi: 10.1101/sqb.2009.74.015. Epub 2009 Sep 4. Review.

PMID:
19734202
16.

Slcyt, a newly identified sex-linked gene, has recently moved onto the X chromosome in Silene latifolia (Caryophyllaceae).

Kaiser VB, Bergero R, Charlesworth D.

Mol Biol Evol. 2009 Oct;26(10):2343-51. doi: 10.1093/molbev/msp141. Epub 2009 Jul 8.

PMID:
19587127
17.

The effects of deleterious mutations on evolution in non-recombining genomes.

Kaiser VB, Charlesworth B.

Trends Genet. 2009 Jan;25(1):9-12. doi: 10.1016/j.tig.2008.10.009. Epub 2008 Nov 21.

PMID:
19027982
18.

Nonrandom distribution of genes with sex-biased expression in the chicken genome.

Kaiser VB, Ellegren H.

Evolution. 2006 Sep;60(9):1945-51.

PMID:
17089978
19.

Insertion events of CR1 retrotransposable elements elucidate the phylogenetic branching order in galliform birds.

Kaiser VB, van Tuinen M, Ellegren H.

Mol Biol Evol. 2007 Jan;24(1):338-47. Epub 2006 Oct 31.

PMID:
17077154

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