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Items: 1 to 50 of 52

1.

Automated quality control in image segmentation: application to the UK Biobank cardiovascular magnetic resonance imaging study.

Robinson R, Valindria VV, Bai W, Oktay O, Kainz B, Suzuki H, Sanghvi MM, Aung N, Paiva JM, Zemrak F, Fung K, Lukaschuk E, Lee AM, Carapella V, Kim YJ, Piechnik SK, Neubauer S, Petersen SE, Page C, Matthews PM, Rueckert D, Glocker B.

J Cardiovasc Magn Reson. 2019 Mar 14;21(1):18. doi: 10.1186/s12968-019-0523-x.

2.

Attention gated networks: Learning to leverage salient regions in medical images.

Schlemper J, Oktay O, Schaap M, Heinrich M, Kainz B, Glocker B, Rueckert D.

Med Image Anal. 2019 Apr;53:197-207. doi: 10.1016/j.media.2019.01.012. Epub 2019 Feb 5.

3.

Evaluating reinforcement learning agents for anatomical landmark detection.

Alansary A, Oktay O, Li Y, Folgoc LL, Hou B, Vaillant G, Kamnitsas K, Vlontzos A, Glocker B, Kainz B, Rueckert D.

Med Image Anal. 2019 Apr;53:156-164. doi: 10.1016/j.media.2019.02.007. Epub 2019 Feb 14.

PMID:
30784956
4.

Human-level Performance On Automatic Head Biometrics In Fetal Ultrasound Using Fully Convolutional Neural Networks.

Sinclair M, Baumgartner CF, Matthew J, Bai W, Martinez JC, Li Y, Smith S, Knight CL, Kainz B, Hajnal J, King AP, Rueckert D.

Conf Proc IEEE Eng Med Biol Soc. 2018 Jul;2018:714-717. doi: 10.1109/EMBC.2018.8512278.

PMID:
30440496
5.

Data concerning the chromatographic isolation of bovine IgG from milk- and colostral whey.

Heidebrecht HJ, Kainz B, Schopf R, Godl K, Karcier Z, Kulozik U, Förster B.

Data Brief. 2018 Oct 5;21:527-539. doi: 10.1016/j.dib.2018.09.115. eCollection 2018 Dec.

6.

Automated cardiovascular magnetic resonance image analysis with fully convolutional networks.

Bai W, Sinclair M, Tarroni G, Oktay O, Rajchl M, Vaillant G, Lee AM, Aung N, Lukaschuk E, Sanghvi MM, Zemrak F, Fung K, Paiva JM, Carapella V, Kim YJ, Suzuki H, Kainz B, Matthews PM, Petersen SE, Piechnik SK, Neubauer S, Glocker B, Rueckert D.

J Cardiovasc Magn Reson. 2018 Sep 14;20(1):65. doi: 10.1186/s12968-018-0471-x.

7.

Altered biomechanical stimulation of the developing hip joint in presence of hip dysplasia risk factors.

Verbruggen SW, Kainz B, Shelmerdine SC, Arthurs OJ, Hajnal JV, Rutherford MA, Phillips ATM, Nowlan NC.

J Biomech. 2018 Sep 10;78:1-9. doi: 10.1016/j.jbiomech.2018.07.016. Epub 2018 Jul 20.

8.

3-D Reconstruction in Canonical Co-Ordinate Space From Arbitrarily Oriented 2-D Images.

Hou B, Khanal B, Alansary A, McDonagh S, Davidson A, Rutherford M, Hajnal JV, Rueckert D, Glocker B, Kainz B.

IEEE Trans Med Imaging. 2018 Aug;37(8):1737-1750. doi: 10.1109/TMI.2018.2798801. Epub 2018 Feb 19.

9.

Isolation of biofunctional bovine immunoglobulin G from milk- and colostral whey with mixed-mode chromatography at lab and pilot scale.

Heidebrecht HJ, Kainz B, Schopf R, Godl K, Karcier Z, Kulozik U, Förster B.

J Chromatogr A. 2018 Aug 10;1562:59-68. doi: 10.1016/j.chroma.2018.05.046. Epub 2018 May 23.

PMID:
29843945
10.

Stresses and strains on the human fetal skeleton during development.

Verbruggen SW, Kainz B, Shelmerdine SC, Hajnal JV, Rutherford MA, Arthurs OJ, Phillips ATM, Nowlan NC.

J R Soc Interface. 2018 Jan;15(138). pii: 20170593. doi: 10.1098/rsif.2017.0593.

11.

Anatomically Constrained Neural Networks (ACNNs): Application to Cardiac Image Enhancement and Segmentation.

Oktay O, Ferrante E, Kamnitsas K, Heinrich M, Bai W, Caballero J, Cook SA, de Marvao A, Dawes T, O'Regan DP, Kainz B, Glocker B, Rueckert D.

IEEE Trans Med Imaging. 2018 Feb;37(2):384-395. doi: 10.1109/TMI.2017.2743464. Epub 2017 Sep 26.

12.

PVR: Patch-to-Volume Reconstruction for Large Area Motion Correction of Fetal MRI.

Alansary A, Rajchl M, McDonagh SG, Murgasova M, Damodaram M, Lloyd DFA, Davidson A, Rutherford M, Hajnal JV, Rueckert D, Kainz B.

IEEE Trans Med Imaging. 2017 Oct;36(10):2031-2044. doi: 10.1109/TMI.2017.2737081. Epub 2017 Sep 1.

13.

SonoNet: Real-Time Detection and Localisation of Fetal Standard Scan Planes in Freehand Ultrasound.

Baumgartner CF, Kamnitsas K, Matthew J, Fletcher TP, Smith S, Koch LM, Kainz B, Rueckert D.

IEEE Trans Med Imaging. 2017 Nov;36(11):2204-2215. doi: 10.1109/TMI.2017.2712367. Epub 2017 Jul 11.

14.

Placenta Maps: In Utero Placental Health Assessment of the Human Fetus.

Miao H, Mistelbauer G, Karimov A, Alansary A, Davidson A, Lloyd DFA, Damodaram M, Story L, Hutter J, Hajnal JV, Rutherford M, Preim B, Kainz B, Groller ME.

IEEE Trans Vis Comput Graph. 2017 Jun;23(6):1612-1623. doi: 10.1109/TVCG.2017.2674938. Epub 2017 Feb 24.

15.

DeepCut: Object Segmentation From Bounding Box Annotations Using Convolutional Neural Networks.

Rajchl M, Lee MC, Oktay O, Kamnitsas K, Passerat-Palmbach J, Bai W, Damodaram M, Rutherford MA, Hajnal JV, Kainz B, Rueckert D.

IEEE Trans Med Imaging. 2017 Feb;36(2):674-683. doi: 10.1109/TMI.2016.2621185. Epub 2016 Nov 9.

16.

Learning clinically useful information from images: Past, present and future.

Rueckert D, Glocker B, Kainz B.

Med Image Anal. 2016 Oct;33:13-18. doi: 10.1016/j.media.2016.06.009. Epub 2016 Jun 15.

17.

RFA-cut: Semi-automatic segmentation of radiofrequency ablation zones with and without needles via optimal s-t-cuts.

Egger J, Busse H, Brandmaier P, Seider D, Gawlitza M, Strocka S, Voglreiter P, Dokter M, Hofmann M, Kainz B, Chen X, Hann A, Boechat P, Yu W, Freisleben B, Alhonnoro T, Pollari M, Moche M, Schmalstieg D.

Conf Proc IEEE Eng Med Biol Soc. 2015;2015:2423-9. doi: 10.1109/EMBC.2015.7318883.

PMID:
26736783
18.

Interactive Volumetry Of Liver Ablation Zones.

Egger J, Busse H, Brandmaier P, Seider D, Gawlitza M, Strocka S, Voglreiter P, Dokter M, Hofmann M, Kainz B, Hann A, Chen X, Alhonnoro T, Pollari M, Schmalstieg D, Moche M.

Sci Rep. 2015 Oct 20;5:15373. doi: 10.1038/srep15373.

19.

Fast Volume Reconstruction From Motion Corrupted Stacks of 2D Slices.

Kainz B, Steinberger M, Wein W, Kuklisova-Murgasova M, Malamateniou C, Keraudren K, Torsney-Weir T, Rutherford M, Aljabar P, Hajnal JV, Rueckert D.

IEEE Trans Med Imaging. 2015 Sep;34(9):1901-13. doi: 10.1109/TMI.2015.2415453. Epub 2015 Mar 20.

20.

Motion corrected 3D reconstruction of the fetal thorax from prenatal MRI.

Kainz B, Malamateniou C, Murgasova M, Keraudren K, Rutherford M, Hajnal JV, Rueckert D.

Med Image Comput Comput Assist Interv. 2014;17(Pt 2):284-91.

21.

Automated fetal brain segmentation from 2D MRI slices for motion correction.

Keraudren K, Kuklisova-Murgasova M, Kyriakopoulou V, Malamateniou C, Rutherford MA, Kainz B, Hajnal JV, Rueckert D.

Neuroimage. 2014 Nov 1;101:633-43. doi: 10.1016/j.neuroimage.2014.07.023. Epub 2014 Jul 22.

22.

Fluorescent sensors based on bacterial fusion proteins.

Mateu BP, Kainz B, Pum D, Sleytr UB, Toca-Herrera JL.

Methods Appl Fluoresc. 2014 Apr 10;2(2):024002. doi: 10.1088/2050-6120/2/2/024002.

PMID:
29148466
23.

Biomaterial and cellular properties as examined through atomic force microscopy, fluorescence optical microscopies and spectroscopic techniques.

Kainz B, Oprzeska-Zingrebe EA, Herrera JL.

Biotechnol J. 2014 Jan;9(1):51-60. doi: 10.1002/biot.201300087. Epub 2013 Nov 22. Review.

PMID:
24265117
24.

Noise-based volume rendering for the visualization of multivariate volumetric data.

Khlebnikov R, Kainz B, Steinberger M, Schmalstieg D.

IEEE Trans Vis Comput Graph. 2013 Dec;19(12):2926-35. doi: 10.1109/TVCG.2013.180.

25.

A fusion tag to fold on: the S-layer protein SgsE confers improved folding kinetics to translationally fused enhanced green fluorescent protein.

Ristl R, Kainz B, Stadlmayr G, Schuster H, Pum D, Messner P, Obinger C, Schaffer C.

J Microbiol Biotechnol. 2012 Sep;22(9):1271-8.

26.

2D crystalline protein layers as immobilization matrices for the development of DNA microarrays.

Scheicher SR, Kainz B, Köstler S, Reitinger N, Steiner N, Ditlbacher H, Leitner A, Pum D, Sleytr UB, Ribitsch V.

Biosens Bioelectron. 2013 Feb 15;40(1):32-7. doi: 10.1016/j.bios.2012.05.037. Epub 2012 Jun 7.

PMID:
22727519
27.

Overexpression of G protein-coupled receptor 5D in the bone marrow is associated with poor prognosis in patients with multiple myeloma.

Atamaniuk J, Gleiss A, Porpaczy E, Kainz B, Grunt TW, Raderer M, Hilgarth B, Drach J, Ludwig H, Gisslinger H, Jaeger U, Gaiger A.

Eur J Clin Invest. 2012 Sep;42(9):953-60. doi: 10.1111/j.1365-2362.2012.02679.x. Epub 2012 May 16.

PMID:
22591013
28.

Crepuscular rays for tumor accessibility planning.

Khlebnikov R, Kainz B, Muehl J, Schmalstieg D.

IEEE Trans Vis Comput Graph. 2011 Dec;17(12):2163-72. doi: 10.1109/TVCG.2011.184.

29.

Vessel segmentation for ablation treatment planning and simulation.

Alhonnoro T, Pollari M, Lilja M, Flanagan R, Kainz B, Muehl J, Mayrhauser U, Portugaller H, Stiegler P, Tscheliessnigg K.

Med Image Comput Comput Assist Interv. 2010;13(Pt 1):45-52.

PMID:
20879213
30.

Fluorescence energy transfer in the bi-fluorescent S-layer tandem fusion protein ECFP-SgsE-YFP.

Kainz B, Steiner K, Sleytr UB, Pum D, Toca-Herrera JL.

J Struct Biol. 2010 Dec;172(3):276-83. doi: 10.1016/j.jsb.2010.07.002. Epub 2010 Jul 29.

PMID:
20650318
31.

Cell surface display of chimeric glycoproteins via the S-layer of Paenibacillus alvei.

Zarschler K, Janesch B, Kainz B, Ristl R, Messner P, Schäffer C.

Carbohydr Res. 2010 Jul 2;345(10):1422-31. doi: 10.1016/j.carres.2010.04.010. Epub 2010 Jun 1.

32.

Computer oriented image acquisition of the liver: Toward a better numerical model for radiofrequency ablation.

Muehl JK, Kainz BK, Portugaller HR, Stiegler PB, Bauer CH.

Conf Proc IEEE Eng Med Biol Soc. 2009;2009:3755-8. doi: 10.1109/IEMBS.2009.5334539.

PMID:
19964809
33.

Absorption, steady-state fluorescence, fluorescence lifetime, and 2D self-assembly properties of engineered fluorescent S-layer fusion proteins of Geobacillus stearothermophilus NRS 2004/3a.

Kainz B, Steiner K, Möller M, Pum D, Schäffer C, Sleytr UB, Toca-Herrera JL.

Biomacromolecules. 2010 Jan 11;11(1):207-14. doi: 10.1021/bm901071b.

PMID:
19954211
34.

Optical oxygen sensors based on Pt(II) porphyrin dye immobilized on S-layer protein matrices.

Scheicher SR, Kainz B, Köstler S, Suppan M, Bizzarri A, Pum D, Sleytr UB, Ribitsch V.

Biosens Bioelectron. 2009 Dec 15;25(4):797-802. doi: 10.1016/j.bios.2009.08.030. Epub 2009 Aug 27.

PMID:
19765970
35.

Genetic engineering of the S-layer protein SbpA of Lysinibacillus sphaericus CCM 2177 for the generation of functionalized nanoarrays.

Badelt-Lichtblau H, Kainz B, Völlenkle C, Egelseer EM, Sleytr UB, Pum D, Ilk N.

Bioconjug Chem. 2009 May 20;20(5):895-903. doi: 10.1021/bc800445r.

PMID:
19402706
36.

Fast marker based C-Arm pose estimation.

Kainz B, Grabner M, Rüther M.

Med Image Comput Comput Assist Interv. 2008;11(Pt 2):652-9.

PMID:
18982660
37.

Recombinant glycans on an S-layer self-assembly protein: a new dimension for nanopatterned biomaterials.

Steiner K, Hanreich A, Kainz B, Hitchen PG, Dell A, Messner P, Schäffer C.

Small. 2008 Oct;4(10):1728-40. doi: 10.1002/smll.200701215.

38.

Magnetic resonance-derived 3-dimensional blood flow patterns in the main pulmonary artery as a marker of pulmonary hypertension and a measure of elevated mean pulmonary arterial pressure.

Reiter G, Reiter U, Kovacs G, Kainz B, Schmidt K, Maier R, Olschewski H, Rienmueller R.

Circ Cardiovasc Imaging. 2008 Jul;1(1):23-30. doi: 10.1161/CIRCIMAGING.108.780247.

PMID:
19808511
39.

Myeloid leukemias express a broad spectrum of VEGF receptors including neuropilin-1 (NRP-1) and NRP-2.

Vales A, Kondo R, Aichberger KJ, Mayerhofer M, Kainz B, Sperr WR, Sillaber C, Jäger U, Valent P.

Leuk Lymphoma. 2007 Oct;48(10):1997-2007.

PMID:
17917967
40.

Expression of MUM1/IRF4 mRNA as a prognostic marker in patients with multiple myeloma.

Heintel D, Zojer N, Schreder M, Strasser-Weippl K, Kainz B, Vesely M, Gisslinger H, Drach J, Gaiger A, Jäger U, Ludwig H.

Leukemia. 2008 Feb;22(2):441-5. Epub 2007 Aug 9. No abstract available.

PMID:
17690696
41.

Overexpression of the paternally expressed gene 10 (PEG10) from the imprinted locus on chromosome 7q21 in high-risk B-cell chronic lymphocytic leukemia.

Kainz B, Shehata M, Bilban M, Kienle D, Heintel D, Krömer-Holzinger E, Le T, Kröber A, Heller G, Schwarzinger I, Demirtas D, Chott A, Döhner H, Zöchbauer-Müller S, Fonatsch C, Zielinski C, Stilgenbauer S, Gaiger A, Wagner O, Jäger U.

Int J Cancer. 2007 Nov 1;121(9):1984-93.

42.

Upregulation of retinoic acid receptor-beta by the epidermal growth factor-receptor inhibitor PD153035 is not mediated by blockade of ErbB pathways.

Grunt TW, Tomek K, Wagner R, Puckmair K, Kainz B, Rünzler D, Gaiger A, Köhler G, Zielinski CC.

J Cell Physiol. 2007 Jun;211(3):803-15.

PMID:
17286282
43.

Deregulated expression of fat and muscle genes in B-cell chronic lymphocytic leukemia with high lipoprotein lipase expression.

Bilban M, Heintel D, Scharl T, Woelfel T, Auer MM, Porpaczy E, Kainz B, Kröber A, Carey VJ, Shehata M, Zielinski C, Pickl W, Stilgenbauer S, Gaiger A, Wagner O, Jäger U; German CLL Study Group.

Leukemia. 2006 Jun;20(6):1080-8.

PMID:
16617321
44.

[Comparison of three outpatient therapy forms for treatment of chronic low back pain-- findings of a multicentre, cluster randomized study].

Kainz B, Gülich M, Engel EM, Jäckel WH.

Rehabilitation (Stuttg). 2006 Apr;45(2):65-77. German.

PMID:
16575712
45.

Limited value of FLT3 mRNA expression in the bone marrow for prognosis and monitoring of patients with acute myeloid leukemia.

Kainz B, Fonatsch C, Schwarzinger I, Sperr WR, Jäger U, Gaiger A.

Haematologica. 2005 May;90(5):695-6.

46.

An EGF receptor inhibitor induces RAR-beta expression in breast and ovarian cancer cells.

Grunt TW, Puckmair K, Tomek K, Kainz B, Gaiger A.

Biochem Biophys Res Commun. 2005 Apr 22;329(4):1253-9.

PMID:
15766561
47.

Highly refractory acute myeloid leukemia.

Füreder W, Filipits M, Sperr WR, Kainz B, Jäger U, Fonatsch C, Schwarzinger I, Haas OA, Pirker R, Lechner K.

Wien Klin Wochenschr. 2004 Aug 31;116(15-16):561-4.

PMID:
15471184
48.

[Evolution of a quality assurance programme for physiotherapy schools - results of the first quality inspections].

Kainz B, Schlag B, Jäckel WH.

Rehabilitation (Stuttg). 2004 Feb;43(1):24-32. German.

PMID:
14963802
49.

Impact of cytogenetics on the prognosis of adults with de novo AML in first relapse.

Weltermann A, Fonatsch C, Haas OA, Greinix HT, Kahls P, Mitterbauer G, Jäger U, Kainz B, Geissler K, Valent P, Sperr WR, Knöbl P, Schwarzinger I, Gleiss A, Lechner K.

Leukemia. 2004 Feb;18(2):293-302.

PMID:
14671635
50.

Relation of in vitro growth characteristics to cytogenetics and treatment outcome in acute myeloid leukemia: prognostic significance in patients with a normal karyotype.

Berer A, Kainz B, Jäger U, Jäger E, Stengg S, Streubel B, Fonatsch C, Mitterbauer G, Lechner K, Geissler K, Ohler L.

Int J Hematol. 2003 Oct;78(3):241-7.

PMID:
14604283

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