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Items: 1 to 50 of 66

1.

Promiscuity of the catalytic Sec7 domain within the guanine nucleotide exchange factor GBF1 in ARF activation, Golgi homeostasis, and effector recruitment.

Bhatt JM, Hancock W, Meissner JM, Kaczmarczyk A, Lee E, Viktorova E, Ramanadham S, Belov GA, Sztul E.

Mol Biol Cell. 2019 Jun 1;30(12):1523-1535. doi: 10.1091/mbc.E18-11-0711. Epub 2019 Apr 3.

PMID:
30943106
2.

Rigid Basepair Monte Carlo Simulations of One-Start and Two-Start Chromatin Fiber Unfolding by Force.

de Jong BE, Brouwer TB, Kaczmarczyk A, Visscher B, van Noort J.

Biophys J. 2018 Nov 20;115(10):1848-1859. doi: 10.1016/j.bpj.2018.10.007. Epub 2018 Oct 11.

3.

First insight into microbiome profile of fungivorous thrips Hoplothrips carpathicus (Insecta: Thysanoptera) at different developmental stages: molecular evidence of Wolbachia endosymbiosis.

Kaczmarczyk A, Kucharczyk H, Kucharczyk M, Kapusta P, Sell J, Zielińska S.

Sci Rep. 2018 Sep 26;8(1):14376. doi: 10.1038/s41598-018-32747-x.

4.

Erratum for Lori et al., "A Single-Domain Response Regulator Functions as an Integrating Hub To Coordinate General Stress Response and Development in Alphaproteobacteria".

Lori C, Kaczmarczyk A, de Jong I, Jenal U.

MBio. 2018 Sep 4;9(5). pii: e01534-18. doi: 10.1128/mBio.01534-18. No abstract available.

5.

Unraveling DNA Organization with Single-Molecule Force Spectroscopy Using Magnetic Tweezers.

Brouwer TB, Kaczmarczyk A, Pham C, van Noort J.

Methods Mol Biol. 2018;1837:317-349. doi: 10.1007/978-1-4939-8675-0_17.

PMID:
30109618
6.

Probing Chromatin Structure with Magnetic Tweezers.

Kaczmarczyk A, Brouwer TB, Pham C, Dekker NH, van Noort J.

Methods Mol Biol. 2018;1814:297-323. doi: 10.1007/978-1-4939-8591-3_18.

PMID:
29956240
7.

A Single-Domain Response Regulator Functions as an Integrating Hub To Coordinate General Stress Response and Development in Alphaproteobacteria.

Lori C, Kaczmarczyk A, de Jong I, Jenal U.

MBio. 2018 May 22;9(3). pii: e00809-18. doi: 10.1128/mBio.00809-18. Erratum in: MBio. 2018 Sep 4;9(5):.

8.

Monitoring of oxidative status in three native Australian species during cold acclimation and cryopreservation.

Funnekotter B, Colville L, Kaczmarczyk A, Turner SR, Bunn E, Mancera RL.

Plant Cell Rep. 2017 Dec;36(12):1903-1916. doi: 10.1007/s00299-017-2204-2. Epub 2017 Sep 12.

PMID:
28900717
9.

Single-molecule force spectroscopy on histone H4 tail-cross-linked chromatin reveals fiber folding.

Kaczmarczyk A, Allahverdi A, Brouwer TB, Nordenskiöld L, Dekker NH, van Noort J.

J Biol Chem. 2017 Oct 20;292(42):17506-17513. doi: 10.1074/jbc.M117.791830. Epub 2017 Aug 30.

10.

[Hashimoto's encephalopathy - rare encephalopathy with good prognosis].

Kaczmarczyk A, Patalong-Ogiewa M, Krzystanek E.

Wiad Lek. 2016;69(6):768-772. Review. Polish.

PMID:
28214813
11.

Gender-Associated Mitochondrial DNA Heteroplasmy in Somatic Tissues of the Endangered Freshwater Mussel Unio crassus (Bivalvia: Unionidae): Implications for Sex Identification and Phylogeographical Studies.

Mioduchowska M, Kaczmarczyk A, Zając K, Zając T, Sell J.

J Exp Zool A Ecol Genet Physiol. 2016 Nov;325(9):610-625. doi: 10.1002/jez.2055.

PMID:
28102008
12.

The complete maternal and paternal mitochondrial genomes of Unio crassus: Mitochondrial molecular clock and the overconfidence of molecular dating.

Burzyński A, Soroka M, Mioduchowska M, Kaczmarczyk A, Sell J.

Mol Phylogenet Evol. 2017 Feb;107:605-608. doi: 10.1016/j.ympev.2016.12.007. Epub 2016 Dec 9.

PMID:
27956259
13.

Role of the PFXFATG[G/Y] Motif in the Activation of SdrG, a Response Regulator Involved in the Alphaproteobacterial General Stress Response.

Campagne S, Dintner S, Gottschlich L, Thibault M, Bortfeld-Miller M, Kaczmarczyk A, Francez-Charlot A, Allain FH, Vorholt JA.

Structure. 2016 Aug 2;24(8):1237-1247. doi: 10.1016/j.str.2016.05.015. Epub 2016 Jul 7.

14.

Multiple σEcfG and NepR Proteins Are Involved in the General Stress Response in Methylobacterium extorquens.

Francez-Charlot A, Frunzke J, Zingg J, Kaczmarczyk A, Vorholt JA.

PLoS One. 2016 Mar 30;11(3):e0152519. doi: 10.1371/journal.pone.0152519. eCollection 2016.

15.

Requirement for PLK1 kinase activity in the maintenance of a robust spindle assembly checkpoint.

O'Connor A, Maffini S, Rainey MD, Kaczmarczyk A, Gaboriau D, Musacchio A, Santocanale C.

Biol Open. 2015 Dec 18;5(1):11-9. doi: 10.1242/bio.014969.

16.

Strain-Induced Spatial and Spectral Isolation of Quantum Emitters in Mono- and Bilayer WSe2.

Kumar S, Kaczmarczyk A, Gerardot BD.

Nano Lett. 2015 Nov 11;15(11):7567-73. doi: 10.1021/acs.nanolett.5b03312. Epub 2015 Oct 26.

17.

Minimally invasive aortic valve replacement - pros and cons of keyhole aortic surgery.

Kaczmarczyk M, Szałański P, Zembala M, Filipiak K, Karolak W, Wojarski J, Garbacz M, Kaczmarczyk A, Kwiecień A, Zembala M.

Kardiochir Torakochirurgia Pol. 2015 Jun;12(2):103-10. doi: 10.5114/kitp.2015.52850. Epub 2015 Jun 30.

18.

The pre-vertebrate origins of neurogenic placodes.

Abitua PB, Gainous TB, Kaczmarczyk AN, Winchell CJ, Hudson C, Kamata K, Nakagawa M, Tsuda M, Kusakabe TG, Levine M.

Nature. 2015 Aug 27;524(7566):462-5. doi: 10.1038/nature14657. Epub 2015 Aug 10.

19.

The branched CcsA/CckA-ChpT-CtrA phosphorelay of Sphingomonas melonis controls motility and biofilm formation.

Francez-Charlot A, Kaczmarczyk A, Vorholt JA.

Mol Microbiol. 2015 Jul;97(1):47-63. doi: 10.1111/mmi.13011. Epub 2015 Apr 28.

20.

Two-tiered histidine kinase pathway involved in heat shock and salt sensing in the general stress response of Sphingomonas melonis Fr1.

Kaczmarczyk A, Hochstrasser R, Vorholt JA, Francez-Charlot A.

J Bacteriol. 2015 Apr;197(8):1466-77. doi: 10.1128/JB.00019-15. Epub 2015 Feb 9.

21.

The general stress response in Alphaproteobacteria.

Francez-Charlot A, Kaczmarczyk A, Fischer HM, Vorholt JA.

Trends Microbiol. 2015 Mar;23(3):164-71. doi: 10.1016/j.tim.2014.12.006. Epub 2015 Jan 10. Review.

PMID:
25582885
22.

Complex two-component signaling regulates the general stress response in Alphaproteobacteria.

Kaczmarczyk A, Hochstrasser R, Vorholt JA, Francez-Charlot A.

Proc Natl Acad Sci U S A. 2014 Dec 2;111(48):E5196-204. doi: 10.1073/pnas.1410095111. Epub 2014 Nov 17.

23.

CENP-W plays a role in maintaining bipolar spindle structure.

Kaczmarczyk A, Sullivan KF.

PLoS One. 2014 Oct 15;9(10):e106464. doi: 10.1371/journal.pone.0106464. eCollection 2014.

24.

Synthetic vanillate-regulated promoter for graded gene expression in Sphingomonas.

Kaczmarczyk A, Vorholt JA, Francez-Charlot A.

Sci Rep. 2014 Sep 29;4:6453. doi: 10.1038/srep06453.

25.

Effects of Zn fertilization on hordein transcripts at early developmental stage of barley grain and correlation with increased Zn concentration in the mature grain.

Uddin MN, Kaczmarczyk A, Vincze E.

PLoS One. 2014 Sep 24;9(9):e108546. doi: 10.1371/journal.pone.0108546. eCollection 2014.

26.

Development of cryopreservation for Loxocarya cinerea---an endemic Australian plant species important for post-mining restoration.

Kaczmarczyk A, Funnekotter B, Turner SR, Bunn E, Bryant G, Hunt TE, Mancera RL.

Cryo Letters. 2013 Sep-Oct;34(5):508-19.

PMID:
24448771
27.

Cumate-inducible gene expression system for sphingomonads and other Alphaproteobacteria.

Kaczmarczyk A, Vorholt JA, Francez-Charlot A.

Appl Environ Microbiol. 2013 Nov;79(21):6795-802. doi: 10.1128/AEM.02296-13. Epub 2013 Aug 30.

28.

Identification and characterization of the first microsatellite loci for the thick-shelled river mussel Unio crassus (Bivalvia: Unionidae).

Sell J, Mioduchowska M, Kaczmarczyk A, Szymańczak R.

J Exp Zool A Ecol Genet Physiol. 2013 Feb;319(2):113-6. doi: 10.1002/jez.1778. Epub 2013 Jan 11.

PMID:
23315817
29.
30.

Cryopreservation of Lomandra sonderi (Asparagaceae) shoot tips using droplet-vitrification.

Menon A, Funnekotter B, Kaczmarczyk A, Bunn E, Turner S, Mancera RL.

Cryo Letters. 2012 Jul-Aug;33(4):259-70.

PMID:
22987237
31.

Time-dependent changes of plasma concentrations of angiopoietins, vascular endothelial growth factor, and soluble forms of their receptors in nonsmall cell lung cancer patients following surgical resection.

Kopczyńska E, Dancewicz M, Kowalewski J, Makarewicz R, Kardymowicz H, Kaczmarczyk A, Tyrakowski T.

ISRN Oncol. 2012;2012:638352. doi: 10.5402/2012/638352. Epub 2012 Mar 26.

32.

Structural basis for sigma factor mimicry in the general stress response of Alphaproteobacteria.

Campagne S, Damberger FF, Kaczmarczyk A, Francez-Charlot A, Allain FH, Vorholt JA.

Proc Natl Acad Sci U S A. 2012 May 22;109(21):E1405-14. doi: 10.1073/pnas.1117003109. Epub 2012 May 1.

33.

Influence of surgical resection on plasma endoglin (CD105) level in non‑small cell lung cancer patients.

Kopczyńska E, Dancewicz M, Kowalewski J, Makarewicz R, Kardymowicz H, Kaczmarczyk A, Tyrakowski T.

Exp Oncol. 2012;34(1):53-6.

PMID:
22453150
34.

Markerless gene deletion system for sphingomonads.

Kaczmarczyk A, Vorholt JA, Francez-Charlot A.

Appl Environ Microbiol. 2012 May;78(10):3774-7. doi: 10.1128/AEM.07347-11. Epub 2012 Mar 16.

35.

Constraints on the use of lifespan-shortening Wolbachia to control dengue fever.

Schraiber JG, Kaczmarczyk AN, Kwok R, Park M, Silverstein R, Rutaganira FU, Aggarwal T, Schwemmer MA, Hom CL, Grosberg RK, Schreiber SJ.

J Theor Biol. 2012 Mar 21;297:26-32. doi: 10.1016/j.jtbi.2011.12.006. Epub 2011 Dec 16.

PMID:
22192469
36.

Role of Sphingomonas sp. strain Fr1 PhyR-NepR-σEcfG cascade in general stress response and identification of a negative regulator of PhyR.

Kaczmarczyk A, Campagne S, Danza F, Metzger LC, Vorholt JA, Francez-Charlot A.

J Bacteriol. 2011 Dec;193(23):6629-38. doi: 10.1128/JB.06006-11. Epub 2011 Sep 23.

37.

Premitotic assembly of human CENPs -T and -W switches centromeric chromatin to a mitotic state.

Prendergast L, van Vuuren C, Kaczmarczyk A, Doering V, Hellwig D, Quinn N, Hoischen C, Diekmann S, Sullivan KF.

PLoS Biol. 2011 Jun;9(6):e1001082. doi: 10.1371/journal.pbio.1001082. Epub 2011 Jun 14.

39.

Influence of cryopreservation on the cytosine methylation state of potato genomic NDA.

Kaczmarczyk A, Houben A, Keller ER, Mette MF.

Cryo Letters. 2010 Sep-Oct;31(5):380-91.

PMID:
21042653
40.

Prospective evaluation of the palliative effect of whole-brain radiotherapy in patients with brain metastases and poor performance status.

Komosinska K, Kepka L, Niwinska A, Pietrzak L, Wierzchowski M, Tyc-Szczepaniak D, Kaczmarczyk A, Bujko K.

Acta Oncol. 2010 Apr;49(3):382-8. doi: 10.3109/02841860903352942.

PMID:
20397770
41.

Plasma concentration of angiopoietin-1, angiopoietin-2 and Tie-2 in cervical cancer.

Kopczyńska E, Makarewicz R, Biedka M, Kaczmarczyk A, Kardymowicz H, Tyrakowski T.

Eur J Gynaecol Oncol. 2009;30(6):646-9.

PMID:
20099495
42.

Frequent genetic differences between matched primary and metastatic breast cancer provide an approach to identification of biomarkers for disease progression.

Popławski AB, Jankowski M, Erickson SW, Díaz de Ståhl T, Partridge EC, Crasto C, Guo J, Gibson J, Menzel U, Bruder CE, Kaczmarczyk A, Benetkiewicz M, Andersson R, Sandgren J, Zegarska B, Bała D, Srutek E, Allison DB, Piotrowski A, Zegarski W, Dumanski JP.

Eur J Hum Genet. 2010 May;18(5):560-8. doi: 10.1038/ejhg.2009.230. Epub 2010 Jan 6.

43.

Centromeres: assembling and propagating epigenetic function.

Glynn M, Kaczmarczyk A, Prendergast L, Quinn N, Sullivan KF.

Subcell Biochem. 2010;50:223-49. doi: 10.1007/978-90-481-3471-7_12. Review.

PMID:
20012585
44.

Alu-repeat-induced deletions within the NCF2 gene causing p67-phox-deficient chronic granulomatous disease (CGD).

Gentsch M, Kaczmarczyk A, van Leeuwen K, de Boer M, Kaus-Drobek M, Dagher MC, Kaiser P, Arkwright PD, Gahr M, Rösen-Wolff A, Bochtler M, Secord E, Britto-Williams P, Saifi GM, Maddalena A, Dbaibo G, Bustamante J, Casanova JL, Roos D, Roesler J.

Hum Mutat. 2010 Feb;31(2):151-8. doi: 10.1002/humu.21156.

45.

The proinflammatory cytokine TNF-alpha -308 AA genotype is associated with polyglandular autoimmunity.

Dittmar M, Kaczmarczyk A, Bischofs C, Kahaly GJ.

Immunol Invest. 2009;38(3-4):255-67.

PMID:
19811436
46.

Characterization of the effects of cisplatin and carboplatin on cell cycle progression and DNA damage response activation in DNA polymerase eta-deficient human cells.

Cruet-Hennequart S, Villalan S, Kaczmarczyk A, O'Meara E, Sokol AM, Carty MP.

Cell Cycle. 2009 Sep 15;8(18):3039-50. Epub 2009 Sep 25.

PMID:
19713747
47.

Influence of alternating temperature preculture on cryopreservation results for potato shoot tips.

Kaczmarczyk A, Shvachko N, Lupysheva Y, Hajirezaei MR, Keller ER.

Plant Cell Rep. 2008 Sep;27(9):1551-8. doi: 10.1007/s00299-008-0574-1. Epub 2008 Jun 28.

48.

Ultrastructural changes associated with cryopreservation of potato (Solanum tuberosum l.) shoot tips.

Kaczmarczyk A, Rutten T, Melzer M, Keller ER.

Cryo Letters. 2008 Mar-Apr;29(2):145-56.

PMID:
18516344
49.

Cryopreservation for plant genebanks - a matter between high expectations and cautious reservation.

Joachim Keller ER, Kaczmarczyk A, Senu A.

Cryo Letters. 2008 Jan-Feb;29(1):53-62.

PMID:
18392290
50.

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