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Items: 1 to 50 of 75

1.

Maternal Allopurinol Prevents Cardiac Dysfunction in Adult Male Offspring Programmed by Chronic Hypoxia During Pregnancy.

Niu Y, Kane AD, Lusby CM, Allison BJ, Chua YY, Kaandorp JJ, Nevin-Dolan R, Ashmore TJ, Blackmore HL, Derks JB, Ozanne SE, Giussani DA.

Hypertension. 2018 Oct;72(4):971-978. doi: 10.1161/HYPERTENSIONAHA.118.11363.

2.

Behavioral and neurodevelopmental outcome of children after maternal allopurinol administration during suspected fetal hypoxia: 5-year follow up of the ALLO-trial.

Klumper J, Kaandorp JJ, Schuit E, Groenendaal F, Koopman-Esseboom C, Mulder EJH, Van Bel F, Benders MJNL, Mol BWJ, van Elburg RM, Bos AF, Derks JB; ALLO-trial study group.

PLoS One. 2018 Aug 23;13(8):e0201063. doi: 10.1371/journal.pone.0201063. eCollection 2018.

3.

Epigenome-associated phenotypic acclimatization to ocean acidification in a reef-building coral.

Liew YJ, Zoccola D, Li Y, Tambutté E, Venn AA, Michell CT, Cui G, Deutekom ES, Kaandorp JA, Voolstra CR, Forêt S, Allemand D, Tambutté S, Aranda M.

Sci Adv. 2018 Jun 6;4(6):eaar8028. doi: 10.1126/sciadv.aar8028. eCollection 2018 Jun.

4.

Directed nucleation and growth by balancing local supersaturation and substrate/nucleus lattice mismatch.

Li L, Fijneman AJ, Kaandorp JA, Aizenberg J, Noorduin WL.

Proc Natl Acad Sci U S A. 2018 Apr 3;115(14):3575-3580. doi: 10.1073/pnas.1712911115. Epub 2018 Mar 19.

5.

Quantification of complex modular architecture in plants.

Reeb C, Kaandorp J, Jansson F, Puillandre N, Dubuisson JY, Cornette R, Jabbour F, Coudert Y, Patiño J, Flot JF, Vanderpoorten A.

New Phytol. 2018 Apr;218(2):859-872. doi: 10.1111/nph.15045. Epub 2018 Feb 22.

6.

High-throughput method for extracting and visualizing the spatial gene expressions from in situ hybridization images: A case study of the early development of the sea anemone Nematostella vectensis.

Abdol AM, Bedard A, Lánský I, Kaandorp JA.

Gene Expr Patterns. 2018 Jan;27:36-45. doi: 10.1016/j.gep.2017.10.005. Epub 2017 Nov 6.

PMID:
29122675
7.

The effect of allometric scaling in coral thermal microenvironments.

Ong RH, King AJC, Kaandorp JA, Mullins BJ, Caley MJ.

PLoS One. 2017 Oct 12;12(10):e0184214. doi: 10.1371/journal.pone.0184214. eCollection 2017.

8.

A novel technique to combine and analyse spatial and temporal expression datasets: A case study with the sea anemone Nematostella vectensis to identify potential gene interactions.

Abdol AM, Röttinger E, Jansson F, Kaandorp JA.

Dev Biol. 2017 Aug 1;428(1):204-214. doi: 10.1016/j.ydbio.2017.06.004. Epub 2017 Jun 8.

9.

Quantitative morphological analysis of 2D images of complex-shaped branching biological growth forms: the example of branching thalli of liverworts.

Konglerd P, Reeb C, Jansson F, Kaandorp JA.

BMC Res Notes. 2017 Feb 20;10(1):103. doi: 10.1186/s13104-017-2424-0.

10.

Schmallenberg Virus in Zoo Ruminants, France and the Netherlands.

Laloy E, Braud C, Bréard E, Kaandorp J, Bourgeois A, Kohl M, Meyer G, Sailleau C, Viarouge C, Zientara S, Chai N.

Emerg Infect Dis. 2016 Dec;22(12):2201-2203. doi: 10.3201/eid2212.150983. No abstract available.

11.

Divergence of mechanistic pathways mediating cardiovascular aging and developmental programming of cardiovascular disease.

Allison BJ, Kaandorp JJ, Kane AD, Camm EJ, Lusby C, Cross CM, Nevin-Dolan R, Thakor AS, Derks JB, Tarry-Adkins JL, Ozanne SE, Giussani DA.

FASEB J. 2016 May;30(5):1968-75. doi: 10.1096/fj.201500057. Epub 2016 Mar 1.

12.

Analysis of a spatial gene expression database for sea anemone Nematostella vectensis during early development.

Botman D, Jansson F, Röttinger E, Martindale MQ, de Jong J, Kaandorp JA.

BMC Syst Biol. 2015 Sep 24;9:63. doi: 10.1186/s12918-015-0209-4.

13.

Gains and losses of coral skeletal porosity changes with ocean acidification acclimation.

Fantazzini P, Mengoli S, Pasquini L, Bortolotti V, Brizi L, Mariani M, Di Giosia M, Fermani S, Capaccioni B, Caroselli E, Prada F, Zaccanti F, Levy O, Dubinsky Z, Kaandorp JA, Konglerd P, Hammel JU, Dauphin Y, Cuif JP, Weaver JC, Fabricius KE, Wagermaier W, Fratzl P, Falini G, Goffredo S.

Nat Commun. 2015 Jul 17;6:7785. doi: 10.1038/ncomms8785.

14.

Temperature affects the silicate morphology in a diatom.

Javaheri N, Dries R, Burson A, Stal LJ, Sloot PMA, Kaandorp JA.

Sci Rep. 2015 Jun 26;5:11652. doi: 10.1038/srep11652.

15.

Maternal allopurinol administration during suspected fetal hypoxia: a novel neuroprotective intervention? A multicentre randomised placebo controlled trial.

Kaandorp JJ, Benders MJ, Schuit E, Rademaker CM, Oudijk MA, Porath MM, Oetomo SB, Wouters MG, van Elburg RM, Franssen MT, Bos AF, de Haan TR, Boon J, de Boer IP, Rijnders RJ, Jacobs CJ, Scheepers LH, Gavilanes DA, Bloemenkamp KW, Rijken M, van Meir CA, von Lindern JS, Huisjes AJ, Bakker SC, Mol BW, Visser GH, Van Bel F, Derks JB.

Arch Dis Child Fetal Neonatal Ed. 2015 May;100(3):F216-23. doi: 10.1136/archdischild-2014-306769. Epub 2014 Dec 15.

PMID:
25512466
16.

Faecal particle size: digestive physiology meets herbivore diversity.

Clauss M, Steuer P, Erlinghagen-Lückerath K, Kaandorp J, Fritz J, Südekum KH, Hummel J.

Comp Biochem Physiol A Mol Integr Physiol. 2015 Jan;179:182-91.

PMID:
25446938
17.

A model of filamentous cyanobacteria leading to reticulate pattern formation.

Tamulonis C, Kaandorp J.

Life (Basel). 2014 Sep 3;4(3):433-56. doi: 10.3390/life4030433.

18.

A computational approach towards a gene regulatory network for the developing Nematostella vectensis gut.

Botman D, Röttinger E, Martindale MQ, de Jong J, Kaandorp JA.

PLoS One. 2014 Jul 30;9(7):e103341. doi: 10.1371/journal.pone.0103341. eCollection 2014.

19.

Understanding the sub-cellular dynamics of silicon transportation and synthesis in diatoms using population-level data and computational optimization.

Javaheri N, Dries R, Kaandorp J.

PLoS Comput Biol. 2014 Jun 19;10(6):e1003687. doi: 10.1371/journal.pcbi.1003687. eCollection 2014 Jun.

20.

The skeleton of the staghorn coral Acropora millepora: molecular and structural characterization.

Ramos-Silva P, Kaandorp J, Herbst F, Plasseraud L, Alcaraz G, Stern C, Corneillat M, Guichard N, Durlet C, Luquet G, Marin F.

PLoS One. 2014 Jun 3;9(6):e97454. doi: 10.1371/journal.pone.0097454. eCollection 2014.

21.

Modeling biosilicification at subcellular scales.

Javaheri N, Cronemberger CM, Kaandorp JA.

Prog Mol Subcell Biol. 2013;54:117-41. doi: 10.1007/978-3-642-41004-8_5. Review.

PMID:
24420712
22.

Maternal-to-fetal allopurinol transfer and xanthine oxidase suppression in the late gestation pregnant rat.

Kane AD, Camm EJ, Richter HG, Lusby C, Tijsseling D, Kaandorp JJ, Derks JB, Ozanne SE, Giussani DA.

Physiol Rep. 2013 Nov;1(6):e00156. doi: 10.1002/phy2.156. Epub 2013 Nov 13.

23.

Rapid target allopurinol concentrations in the hypoxic fetus after maternal administration during labour.

Kaandorp JJ, van den Broek MP, Benders MJ, Oudijk MA, Porath MM, Bambang Oetomo S, Wouters MG, van Elburg R, Franssen MT, Bos AF, Mol BW, Visser GH, van Bel F, Rademaker CM, Derks JB; ALLO-trial Study Group.

Arch Dis Child Fetal Neonatal Ed. 2014 Mar;99(2):F144-8. doi: 10.1136/archdischild-2013-304876. Epub 2013 Dec 18.

PMID:
24352085
24.

Xanthine oxidase and the fetal cardiovascular defence to hypoxia in late gestation ovine pregnancy.

Kane AD, Hansell JA, Herrera EA, Allison BJ, Niu Y, Brain KL, Kaandorp JJ, Derks JB, Giussani DA.

J Physiol. 2014 Feb 1;592(3):475-89. doi: 10.1113/jphysiol.2013.264275. Epub 2013 Nov 18.

25.

Comparison between colony morphology and molecular phylogeny in the Caribbean scleractinian coral genus Madracis.

Filatov MV, Frade PR, Bak RP, Vermeij MJ, Kaandorp JA.

PLoS One. 2013 Aug 14;8(8):e71287. doi: 10.1371/journal.pone.0071287. eCollection 2013.

26.

Antenatal allopurinol reduces hippocampal brain damage after acute birth asphyxia in late gestation fetal sheep.

Kaandorp JJ, Derks JB, Oudijk MA, Torrance HL, Harmsen MG, Nikkels PG, van Bel F, Visser GH, Giussani DA.

Reprod Sci. 2014 Feb;21(2):251-9. doi: 10.1177/1933719113493516. Epub 2013 Jun 21.

27.

The skeletal proteome of the coral Acropora millepora: the evolution of calcification by co-option and domain shuffling.

Ramos-Silva P, Kaandorp J, Huisman L, Marie B, Zanella-Cléon I, Guichard N, Miller DJ, Marin F.

Mol Biol Evol. 2013 Sep;30(9):2099-112. doi: 10.1093/molbev/mst109. Epub 2013 Jun 12.

28.

Regional decline in growth rates of massive Porites corals in Southeast Asia.

Tanzil JT, Brown BE, Dunne RP, Lee JN, Kaandorp JA, Todd PA.

Glob Chang Biol. 2013 Oct;19(10):3011-23. doi: 10.1111/gcb.12279. Epub 2013 Jul 29.

PMID:
23744603
29.

Biomineralization toolkit: the importance of sample cleaning prior to the characterization of biomineral proteomes.

Ramos-Silva P, Marin F, Kaandorp J, Marie B.

Proc Natl Acad Sci U S A. 2013 Jun 11;110(24):E2144-6. doi: 10.1073/pnas.1303657110. Epub 2013 May 3. No abstract available.

30.

Promoter sequence determines the relationship between expression level and noise.

Carey LB, van Dijk D, Sloot PM, Kaandorp JA, Segal E.

PLoS Biol. 2013;11(4):e1001528. doi: 10.1371/journal.pbio.1001528. Epub 2013 Apr 2.

31.

Modelling growth and form of the scleractinian coral Pocillopora verrucosa and the influence of hydrodynamics.

Chindapol N, Kaandorp JA, Cronemberger C, Mass T, Genin A.

PLoS Comput Biol. 2013;9(1):e1002849. doi: 10.1371/journal.pcbi.1002849. Epub 2013 Jan 10.

32.

RT-PCR detection of respiratory pathogens in newborn children admitted to a neonatal medium care unit.

Smit PM, Pronk SM, Kaandorp JC, Weijer O, Lauw FN, Smits PH, Claas EC, Mulder JW, Beijnen JH, Brandjes DP.

Pediatr Res. 2013 Mar;73(3):355-61. doi: 10.1038/pr.2012.176. Epub 2012 Nov 30.

PMID:
23202720
33.

Fibre digestibility in large herbivores as related to digestion type and body mass--an in vitro approach.

Steuer P, Südekum KH, Müller DW, Kaandorp J, Clauss M, Hummel J.

Comp Biochem Physiol A Mol Integr Physiol. 2013 Feb;164(2):319-26. doi: 10.1016/j.cbpa.2012.10.026. Epub 2012 Oct 26.

PMID:
23103671
34.
35.

Geometric theory predicts bifurcations in minimal wiring cost trees in biology are flat.

Kim Y, Sinclair R, Chindapol N, Kaandorp JA, De Schutter E.

PLoS Comput Biol. 2012;8(4):e1002474. doi: 10.1371/journal.pcbi.1002474. Epub 2012 Apr 12.

36.

Novel molluskan biomineralization proteins retrieved from proteomics: a case study with Upsalin.

Ramos-Silva P, Benhamada S, Le Roy N, Marie B, Guichard N, Zanella-Cléon I, Plasseraud L, Corneillat M, Alcaraz G, Kaandorp J, Marin F.

Chembiochem. 2012 May 7;13(7):1067-78. doi: 10.1002/cbic.201100708. Epub 2012 Apr 4.

PMID:
22474002
37.

Fermentation of animal components in strict carnivores: a comparative study with cheetah fecal inoculum.

Depauw S, Bosch G, Hesta M, Whitehouse-Tedd K, Hendriks WH, Kaandorp J, Janssens GP.

J Anim Sci. 2012 Aug;90(8):2540-8. doi: 10.2527/jas.2011-4377. Epub 2012 Jan 27.

PMID:
22287677
38.

Long-term neuroprotective effects of allopurinol after moderate perinatal asphyxia: follow-up of two randomised controlled trials.

Kaandorp JJ, van Bel F, Veen S, Derks JB, Groenendaal F, Rijken M, Roze E, Venema MM, Rademaker CM, Bos AF, Benders MJ.

Arch Dis Child Fetal Neonatal Ed. 2012 May;97(3):F162-6. doi: 10.1136/archdischild-2011-300356. Epub 2011 Nov 17.

PMID:
22102633
39.

Interaction of the retinoic acid signaling pathway with spicule formation in the marine sponge Suberites domuncula through activation of bone morphogenetic protein-1.

Müller WE, Binder M, von Lintig J, Guo YW, Wang X, Kaandorp JA, Wiens M, Schröder HC.

Biochim Biophys Acta. 2011 Dec;1810(12):1178-94. doi: 10.1016/j.bbagen.2011.09.006. Epub 2011 Sep 16.

PMID:
21952113
40.

Modeling filamentous cyanobacteria reveals the advantages of long and fast trichomes for optimizing light exposure.

Tamulonis C, Postma M, Kaandorp J.

PLoS One. 2011;6(7):e22084. doi: 10.1371/journal.pone.0022084. Epub 2011 Jul 18.

41.

Is there an influence of body mass on digesta mean retention time in herbivores? A comparative study on ungulates.

Steuer P, Südekum KH, Müller DW, Franz R, Kaandorp J, Clauss M, Hummel J.

Comp Biochem Physiol A Mol Integr Physiol. 2011 Nov;160(3):355-64. doi: 10.1016/j.cbpa.2011.07.005. Epub 2011 Jul 13.

PMID:
21777685
42.

A cell-based model of Nematostella vectensis gastrulation including bottle cell formation, invagination and zippering.

Tamulonis C, Postma M, Marlow HQ, Magie CR, de Jong J, Kaandorp J.

Dev Biol. 2011 Mar 1;351(1):217-28. doi: 10.1016/j.ydbio.2010.10.017. Epub 2010 Oct 23.

43.

Semi-permeable species boundaries in the coral genus Madracis: introgression in a brooding coral system.

Frade PR, Reyes-Nivia MC, Faria J, Kaandorp JA, Luttikhuizen PC, Bak RP.

Mol Phylogenet Evol. 2010 Dec;57(3):1072-90. doi: 10.1016/j.ympev.2010.09.010. Epub 2010 Sep 21.

PMID:
20863897
44.

A comparison between coral colonies of the genus Madracis and simulated forms.

Filatov MV, Kaandorp JA, Postma M, van Liere R, Kruszyński KJ, Vermeij MJ, Streekstra GJ, Bak RP.

Proc Biol Sci. 2010 Dec 7;277(1700):3555-61. doi: 10.1098/rspb.2010.0957. Epub 2010 Jun 23.

45.

Antenatal allopurinol for reduction of birth asphyxia induced brain damage (ALLO-Trial); a randomized double blind placebo controlled multicenter study.

Kaandorp JJ, Benders MJ, Rademaker CM, Torrance HL, Oudijk MA, de Haan TR, Bloemenkamp KW, Rijken M, van Pampus MG, Bos AF, Porath MM, Oetomo SB, Willekes C, Gavilanes AW, Wouters MG, van Elburg RM, Huisjes AJ, Bakker SC, van Meir CA, von Lindern J, Boon J, de Boer IP, Rijnders RJ, Jacobs CJ, Uiterwaal CS, Mol BW, Visser GH, van Bel F, Derks JB.

BMC Pregnancy Childbirth. 2010 Feb 18;10:8. doi: 10.1186/1471-2393-10-8.

46.

Inferring Drosophila gap gene regulatory network: pattern analysis of simulated gene expression profiles and stability analysis.

Fomekong-Nanfack Y, Postma M, Kaandorp JA.

BMC Res Notes. 2009 Dec 16;2:256. doi: 10.1186/1756-0500-2-256.

47.

Inferring Drosophila gap gene regulatory network: a parameter sensitivity and perturbation analysis.

Fomekong-Nanfack Y, Postma M, Kaandorp JA.

BMC Syst Biol. 2009 Sep 21;3:94. doi: 10.1186/1752-0509-3-94.

48.

[Birds and special animals in Europe under one umbrella?].

Kaandorp J.

Tijdschr Diergeneeskd. 2009 Aug 15;134(16):671; author reply 671. Dutch. No abstract available.

PMID:
19757682
49.

Calcium homeostasis and signaling in yeast cells and cardiac myocytes.

Cui J, Kaandorp JA, Sloot PM, Lloyd CM, Filatov MV.

FEMS Yeast Res. 2009 Dec;9(8):1137-47. doi: 10.1111/j.1567-1364.2009.00552.x. Epub 2009 Jul 16. Review.

50.

Systems biology: parameter estimation for biochemical models.

Ashyraliyev M, Fomekong-Nanfack Y, Kaandorp JA, Blom JG.

FEBS J. 2009 Feb;276(4):886-902. doi: 10.1111/j.1742-4658.2008.06844.x. Review.

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