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Items: 9

1.

SIMToolbox: a MATLAB toolbox for structured illumination fluorescence microscopy.

Křížek P, Lukeš T, Ovesný M, Fliegel K, Hagen GM.

Bioinformatics. 2016 Jan 15;32(2):318-20. doi: 10.1093/bioinformatics/btv576. Epub 2015 Oct 6.

PMID:
26446133
2.

High density 3D localization microscopy using sparse support recovery.

Ovesný M, Křížek P, Švindrych Z, Hagen GM.

Opt Express. 2014 Dec 15;22(25):31263-76. doi: 10.1364/OE.22.031263.

PMID:
25607074
3.

Three-dimensional super-resolution structured illumination microscopy with maximum a posteriori probability image estimation.

Lukeš T, Křížek P, Švindrych Z, Benda J, Ovesný M, Fliegel K, Klíma M, Hagen GM.

Opt Express. 2014 Dec 1;22(24):29805-17. doi: 10.1364/OE.22.029805.

PMID:
25606910
4.

Separation of replication and transcription domains in nucleoli.

Smirnov E, Borkovec J, Kováčik L, Svidenská S, Schröfel A, Skalníková M, Švindrych Z, Křížek P, Ovesný M, Hagen GM, Juda P, Michalová K, Cardoso MC, Cmarko D, Raška I.

J Struct Biol. 2014 Dec;188(3):259-66. doi: 10.1016/j.jsb.2014.10.001. Epub 2014 Oct 17.

PMID:
25450594
5.

ThunderSTORM: a comprehensive ImageJ plug-in for PALM and STORM data analysis and super-resolution imaging.

Ovesný M, Křížek P, Borkovec J, Svindrych Z, Hagen GM.

Bioinformatics. 2014 Aug 15;30(16):2389-90. doi: 10.1093/bioinformatics/btu202. Epub 2014 Apr 25.

6.

A benchmark for comparison of cell tracking algorithms.

Maška M, Ulman V, Svoboda D, Matula P, Matula P, Ederra C, Urbiola A, España T, Venkatesan S, Balak DM, Karas P, Bolcková T, Streitová M, Carthel C, Coraluppi S, Harder N, Rohr K, Magnusson KE, Jaldén J, Blau HM, Dzyubachyk O, Křížek P, Hagen GM, Pastor-Escuredo D, Jimenez-Carretero D, Ledesma-Carbayo MJ, Muñoz-Barrutia A, Meijering E, Kozubek M, Ortiz-de-Solorzano C.

Bioinformatics. 2014 Jun 1;30(11):1609-17. doi: 10.1093/bioinformatics/btu080. Epub 2014 Feb 12.

7.

Flexible structured illumination microscope with a programmable illumination array.

Křížek P, Raška I, Hagen GM.

Opt Express. 2012 Oct 22;20(22):24585-99. doi: 10.1364/OE.20.024585.

PMID:
23187221
8.

Why has nature invented three stop codons of DNA and only one start codon?

Křížek M, Křížek P.

J Theor Biol. 2012 Jul 7;304:183-7. doi: 10.1016/j.jtbi.2012.03.026. Epub 2012 Mar 30.

PMID:
22483666
9.

Minimizing detection errors in single molecule localization microscopy.

Křížek P, Raška I, Hagen GM.

Opt Express. 2011 Feb 14;19(4):3226-35. doi: 10.1364/OE.19.003226.

PMID:
21369145

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