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Macroecology to Unite All Life, Large and Small. Shade A et al. Trends Ecol Evol. (2018)

Where less may be more: how the rare biosphere pulls ecosystems strings. Jousset A et al. ISME J. (2017)

Archaeal Diversity and CO<sub>2</sub> Fixers in Carbonate-/Siliciclastic-Rock Groundwater Ecosystems. Lazar CS et al. Archaea. (2017)

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Items: 1 to 50 of 92


Physiological and genomic insights into lanthanide-dependent methylotrophs of the family Beijerinckiaceae.

Wegner CE, Gorniak L, Riedel S, Westermann M, Küsel K.

Appl Environ Microbiol. 2019 Oct 11. pii: AEM.01830-19. doi: 10.1128/AEM.01830-19. [Epub ahead of print]


DNA- and RNA- Derived Fungal Communities in Subsurface Aquifers Only Partly Overlap but React Similarly to Environmental Factors.

Nawaz A, Purahong W, Herrmann M, Küsel K, Buscot F, Wubet T.

Microorganisms. 2019 Sep 11;7(9). pii: E341. doi: 10.3390/microorganisms7090341.


Predominance of Cand. Patescibacteria in Groundwater Is Caused by Their Preferential Mobilization From Soils and Flourishing Under Oligotrophic Conditions.

Herrmann M, Wegner CE, Taubert M, Geesink P, Lehmann K, Yan L, Lehmann R, Totsche KU, Küsel K.

Front Microbiol. 2019 Jun 20;10:1407. doi: 10.3389/fmicb.2019.01407. eCollection 2019.


The endolithic bacterial diversity of shallow bedrock ecosystems.

Lazar CS, Lehmann R, Stoll W, Rosenberger J, Totsche KU, Küsel K.

Sci Total Environ. 2019 Aug 20;679:35-44. doi: 10.1016/j.scitotenv.2019.04.281. Epub 2019 Apr 26.


14C-Free Carbon Is a Major Contributor to Cellular Biomass in Geochemically Distinct Groundwater of Shallow Sedimentary Bedrock Aquifers.

Schwab VF, Nowak ME, Elder CD, Trumbore SE, Xu X, Gleixner G, Lehmann R, Pohnert G, Muhr J, Küsel K, Totsche KU.

Water Resour Res. 2019 Mar;55(3):2104-2121. doi: 10.1029/2017WR022067. Epub 2019 Mar 15.


Erratum for Wegner et al., "Biogeochemical Regimes in Shallow Aquifers Reflect the Metabolic Coupling of the Elements Nitrogen, Sulfur, and Carbon".

Wegner CE, Gaspar M, Geesink P, Herrmann M, Marz M, Küsel K.

Appl Environ Microbiol. 2019 Apr 18;85(9). pii: e00502-19. doi: 10.1128/AEM.00502-19. Print 2019 May 1. No abstract available.


Artificial Microbial Arenas: Materials for Observing and Manipulating Microbial Consortia.

Wondraczek L, Pohnert G, Schacher FH, Köhler A, Gottschaldt M, Schubert US, Küsel K, Brakhage AA.

Adv Mater. 2019 Jun;31(24):e1900284. doi: 10.1002/adma.201900284. Epub 2019 Apr 16. Review.


Microbial Fe(II) oxidation by Sideroxydans lithotrophicus ES-1 in the presence of Schlöppnerbrunnen fen-derived humic acids.

Hädrich A, Taillefert M, Akob DM, Cooper RE, Litzba U, Wagner FE, Nietzsche S, Ciobota V, Rösch P, Popp J, Küsel K.

FEMS Microbiol Ecol. 2019 Apr 1;95(4). pii: fiz034. doi: 10.1093/femsec/fiz034.


Divergent microbial communities in groundwater and overlying soils exhibit functional redundancy for plant-polysaccharide degradation.

Taubert M, Stähly J, Kolb S, Küsel K.

PLoS One. 2019 Mar 13;14(3):e0212937. doi: 10.1371/journal.pone.0212937. eCollection 2019.


Biogeochemical Regimes in Shallow Aquifers Reflect the Metabolic Coupling of the Elements Nitrogen, Sulfur, and Carbon.

Wegner CE, Gaspar M, Geesink P, Herrmann M, Marz M, Küsel K.

Appl Environ Microbiol. 2019 Feb 20;85(5). pii: e02346-18. doi: 10.1128/AEM.02346-18. Print 2019 Mar 1. Erratum in: Appl Environ Microbiol. 2019 Apr 18;85(9):.


Iron-organic matter complexes accelerate microbial iron cycling in an iron-rich fen.

Kügler S, Cooper RE, Wegner CE, Mohr JF, Wichard T, Küsel K.

Sci Total Environ. 2019 Jan 1;646:972-988. doi: 10.1016/j.scitotenv.2018.07.258. Epub 2018 Jul 30.


Macroecology to Unite All Life, Large and Small.

Shade A, Dunn RR, Blowes SA, Keil P, Bohannan BJM, Herrmann M, Küsel K, Lennon JT, Sanders NJ, Storch D, Chase J.

Trends Ecol Evol. 2018 Oct;33(10):731-744. doi: 10.1016/j.tree.2018.08.005. Epub 2018 Sep 9.


Growth promotion and inhibition induced by interactions of groundwater bacteria.

Geesink P, Tyc O, Küsel K, Taubert M, van de Velde C, Kumar S, Garbeva P.

FEMS Microbiol Ecol. 2018 Nov 1;94(11). doi: 10.1093/femsec/fiy164.


First insights into the living groundwater mycobiome of the terrestrial biogeosphere.

Nawaz A, Purahong W, Lehmann R, Herrmann M, Totsche KU, Küsel K, Wubet T, Buscot F.

Water Res. 2018 Nov 15;145:50-61. doi: 10.1016/j.watres.2018.07.067. Epub 2018 Jul 28.


Thiosulfate- and hydrogen-driven autotrophic denitrification by a microbial consortium enriched from groundwater of an oligotrophic limestone aquifer.

Kumar S, Herrmann M, Blohm A, Hilke I, Frosch T, Trumbore SE, Küsel K.

FEMS Microbiol Ecol. 2018 Oct 1;94(10). doi: 10.1093/femsec/fiy141.


Tracking active groundwater microbes with D2 O labelling to understand their ecosystem function.

Taubert M, Stöckel S, Geesink P, Girnus S, Jehmlich N, von Bergen M, Rösch P, Popp J, Küsel K.

Environ Microbiol. 2018 Jan;20(1):369-384. doi: 10.1111/1462-2920.14010. Epub 2017 Dec 15.


Nitrogen Loss from Pristine Carbonate-Rock Aquifers of the Hainich Critical Zone Exploratory (Germany) Is Primarily Driven by Chemolithoautotrophic Anammox Processes.

Kumar S, Herrmann M, Thamdrup B, Schwab VF, Geesink P, Trumbore SE, Totsche KU, Küsel K.

Front Microbiol. 2017 Oct 10;8:1951. doi: 10.3389/fmicb.2017.01951. eCollection 2017.


Physiological and ecological implications of an iron- or hydrogen-oxidizing member of the Zetaproteobacteria, Ghiorsea bivora, gen. nov., sp. nov.

Mori JF, Scott JJ, Hager KW, Moyer CL, Küsel K, Emerson D.

ISME J. 2017 Nov;11(11):2624-2636. doi: 10.1038/ismej.2017.132. Epub 2017 Aug 18.


Archaeal Diversity and CO2 Fixers in Carbonate-/Siliciclastic-Rock Groundwater Ecosystems.

Lazar CS, Stoll W, Lehmann R, Herrmann M, Schwab VF, Akob DM, Nawaz A, Wubet T, Buscot F, Totsche KU, Küsel K.

Archaea. 2017 Jun 13;2017:2136287. doi: 10.1155/2017/2136287. eCollection 2017.


Attached and Suspended Denitrifier Communities in Pristine Limestone Aquifers Harbor High Fractions of Potential Autotrophs Oxidizing Reduced Iron and Sulfur Compounds.

Herrmann M, Opitz S, Harzer R, Totsche KU, Küsel K.

Microb Ecol. 2017 Aug;74(2):264-277. doi: 10.1007/s00248-017-0950-x. Epub 2017 Feb 18.


Sticking together: inter-species aggregation of bacteria isolated from iron snow is controlled by chemical signaling.

Mori JF, Ueberschaar N, Lu S, Cooper RE, Pohnert G, Küsel K.

ISME J. 2017 May;11(5):1075-1086. doi: 10.1038/ismej.2016.186. Epub 2017 Jan 31.


Where less may be more: how the rare biosphere pulls ecosystems strings.

Jousset A, Bienhold C, Chatzinotas A, Gallien L, Gobet A, Kurm V, Küsel K, Rillig MC, Rivett DW, Salles JF, van der Heijden MG, Youssef NH, Zhang X, Wei Z, Hol WH.

ISME J. 2017 Apr;11(4):853-862. doi: 10.1038/ismej.2016.174. Epub 2017 Jan 10.


Corrigendum: Community Composition and Abundance of Bacterial, Archaeal, and Nitrifying Populations in Savanna Soils on Contrasting Bedrock Material in Kruger National Park, South Africa.

Rughöft S, Herrmann M, Lazar CS, Cesarz S, Levick SR, Trumbore SE, Küsel K.

Front Microbiol. 2016 Nov 29;7:1954. eCollection 2016.


Plants, microorganisms, and soil temperatures contribute to a decrease in methane fluxes on a drained Arctic floodplain.

Kwon MJ, Beulig F, Ilie I, Wildner M, Küsel K, Merbold L, Mahecha MD, Zimov N, Zimov SA, Heimann M, Schuur EAG, Kostka JE, Kolle O, Hilke I, Göckede M.

Glob Chang Biol. 2017 Jun;23(6):2396-2412. doi: 10.1111/gcb.13558. Epub 2016 Nov 30.


Candidate Brocadiales dominates C, N and S cycling in anoxic groundwater of a pristine limestone-fracture aquifer.

Starke R, Müller M, Gaspar M, Marz M, Küsel K, Totsche KU, von Bergen M, Jehmlich N.

J Proteomics. 2017 Jan 30;152:153-160. doi: 10.1016/j.jprot.2016.11.003. Epub 2016 Nov 10.


Community Composition and Abundance of Bacterial, Archaeal and Nitrifying Populations in Savanna Soils on Contrasting Bedrock Material in Kruger National Park, South Africa.

Rughöft S, Herrmann M, Lazar CS, Cesarz S, Levick SR, Trumbore SE, Küsel K.

Front Microbiol. 2016 Oct 19;7:1638. eCollection 2016. Erratum in: Front Microbiol. 2016 Nov 29;7:1954.


Altered carbon turnover processes and microbiomes in soils under long-term extremely high CO2 exposure.

Beulig F, Urich T, Nowak M, Trumbore SE, Gleixner G, Gilfillan GD, Fjelland KE, Küsel K.

Nat Microbiol. 2016 Jan 27;1:15025. doi: 10.1038/nmicrobiol.2015.25.


Superimposed Pristine Limestone Aquifers with Marked Hydrochemical Differences Exhibit Distinct Fungal Communities.

Nawaz A, Purahong W, Lehmann R, Herrmann M, Küsel K, Totsche KU, Buscot F, Wubet T.

Front Microbiol. 2016 May 9;7:666. doi: 10.3389/fmicb.2016.00666. eCollection 2016.


Biological Low-pH Mn(II) Oxidation in a Manganese Deposit Influenced by Metal-Rich Groundwater.

Bohu T, Akob DM, Abratis M, Lazar CS, Küsel K.

Appl Environ Microbiol. 2016 May 2;82(10):3009-3021. doi: 10.1128/AEM.03844-15. Print 2016 May 15.


Extremophile microbiomes in acidic and hypersaline river sediments of Western Australia.

Lu S, Peiffer S, Lazar CS, Oldham C, Neu TR, Ciobota V, Näb O, Lillicrap A, Rösch P, Popp J, Küsel K.

Environ Microbiol Rep. 2016 Feb;8(1):58-67. doi: 10.1111/1758-2229.12351. Epub 2015 Dec 21.


Schwertmannite formation at cell junctions by a new filament-forming Fe(II)-oxidizing isolate affiliated with the novel genus Acidithrix.

Mori JF, Lu S, Händel M, Totsche KU, Neu TR, Iancu VV, Tarcea N, Popp J, Küsel K.

Microbiology. 2016 Jan;162(1):62-71. doi: 10.1099/mic.0.000205. Epub 2015 Oct 26.


Dominance of 'Gallionella capsiferriformans' and heavy metal association with Gallionella-like stalks in metal-rich pH 6 mine water discharge.

Fabisch M, Freyer G, Johnson CA, Büchel G, Akob DM, Neu TR, Küsel K.

Geobiology. 2016 Jan;14(1):68-90. doi: 10.1111/gbi.12162. Epub 2015 Sep 26.


Characterization of pH dependent Mn(II) oxidation strategies and formation of a bixbyite-like phase by Mesorhizobium australicum T-G1.

Bohu T, Santelli CM, Akob DM, Neu TR, Ciobota V, Rösch P, Popp J, Nietzsche S, Küsel K.

Front Microbiol. 2015 Jul 17;6:734. doi: 10.3389/fmicb.2015.00734. eCollection 2015.


Metals other than uranium affected microbial community composition in a historical uranium-mining site.

Sitte J, Löffler S, Burkhardt EM, Goldfarb KC, Büchel G, Hazen TC, Küsel K.

Environ Sci Pollut Res Int. 2015 Dec;22(24):19326-41. doi: 10.1007/s11356-015-4791-1. Epub 2015 Jul 1.


Rapid monitoring of intermediate states and mass balance of nitrogen during denitrification by means of cavity enhanced Raman multi-gas sensing.

Keiner R, Herrmann M, Küsel K, Popp J, Frosch T.

Anal Chim Acta. 2015 Mar 15;864:39-47. doi: 10.1016/j.aca.2015.02.007. Epub 2015 Feb 12.


Large fractions of CO2-fixing microorganisms in pristine limestone aquifers appear to be involved in the oxidation of reduced sulfur and nitrogen compounds.

Herrmann M, Rusznyák A, Akob DM, Schulze I, Opitz S, Totsche KU, Küsel K.

Appl Environ Microbiol. 2015 Apr;81(7):2384-94. doi: 10.1128/AEM.03269-14. Epub 2015 Jan 23.


Arsenic-rich acid mine water with extreme arsenic concentration: mineralogy, geochemistry, microbiology, and environmental implications.

Majzlan J, Plášil J, Škoda R, Gescher J, Kögler F, Rusznyak A, Küsel K, Neu TR, Mangold S, Rothe J.

Environ Sci Technol. 2014 Dec 2;48(23):13685-93. doi: 10.1021/es5024916. Epub 2014 Nov 14.


Carbon flow from volcanic CO2 into soil microbial communities of a wetland mofette.

Beulig F, Heuer VB, Akob DM, Viehweger B, Elvert M, Herrmann M, Hinrichs KU, Küsel K.

ISME J. 2015 Mar;9(3):746-59. doi: 10.1038/ismej.2014.148. Epub 2014 Sep 12.


Revealing the microbial community structure of clogging materials in dewatering wells differing in physico-chemical parameters in an open-cast mining area.

Wang J, Sickinger M, Ciobota V, Herrmann M, Rasch H, Rösch P, Popp J, Küsel K.

Water Res. 2014 Oct 15;63:222-33. doi: 10.1016/j.watres.2014.06.021. Epub 2014 Jun 25.


Identification of Mn(II)-oxidizing bacteria from a low-pH contaminated former uranium mine.

Akob DM, Bohu T, Beyer A, Schäffner F, Händel M, Johnson CA, Merten D, Büchel G, Totsche KU, Küsel K.

Appl Environ Microbiol. 2014 Aug;80(16):5086-97. doi: 10.1128/AEM.01296-14. Epub 2014 Jun 13.


Surprising abundance of Gallionella-related iron oxidizers in creek sediments at pH 4.4 or at high heavy metal concentrations.

Fabisch M, Beulig F, Akob DM, Küsel K.

Front Microbiol. 2013 Dec 18;4:390. doi: 10.3389/fmicb.2013.00390. eCollection 2013.


Raman spectroscopy-an innovative and versatile tool to follow the respirational activity and carbonate biomineralization of important cave bacteria.

Keiner R, Frosch T, Hanf S, Rusznyak A, Akob DM, Küsel K, Popp J.

Anal Chem. 2013 Sep 17;85(18):8708-14. doi: 10.1021/ac401699d. Epub 2013 Aug 23.


Phagotrophic protist diversity in the groundwater of a karstified aquifer - morphological and molecular analysis.

Risse-Buhl U, Herrmann M, Lange P, Akob DM, Pizani N, Schönborn W, Totsche KU, Küsel K.

J Eukaryot Microbiol. 2013 Sep-Oct;60(5):467-79. doi: 10.1111/jeu.12054. Epub 2013 Jun 27.


Insights into the structure and metabolic function of microbes that shape pelagic iron-rich aggregates ("iron snow").

Lu S, Chourey K, Reiche M, Nietzsche S, Shah MB, Neu TR, Hettich RL, Küsel K.

Appl Environ Microbiol. 2013 Jul;79(14):4272-81. doi: 10.1128/AEM.00467-13. Epub 2013 May 3.


STXM and NanoSIMS investigations on EPS fractions before and after adsorption to goethite.

Liu X, Eusterhues K, Thieme J, Ciobota V, Höschen C, Mueller CW, Küsel K, Kögel-Knabner I, Rösch P, Popp J, Totsche KU.

Environ Sci Technol. 2013 Apr 2;47(7):3158-66. doi: 10.1021/es3039505. Epub 2013 Mar 13.


Predominance of thaumarchaeal ammonia oxidizer abundance and transcriptional activity in an acidic fen.

Herrmann M, Hädrich A, Küsel K.

Environ Microbiol. 2012 Nov;14(11):3013-25. doi: 10.1111/j.1462-2920.2012.02882.x. Epub 2012 Sep 27.


Gene Expression Correlates with Process Rates Quantified for Sulfate- and Fe(III)-Reducing Bacteria in U(VI)-Contaminated Sediments.

Akob DM, Lee SH, Sheth M, Küsel K, Watson DB, Palumbo AV, Kostka JE, Chin KJ.

Front Microbiol. 2012 Aug 9;3:280. doi: 10.3389/fmicb.2012.00280. eCollection 2012.


Origin and fate of acetate in an acidic fen.

Hädrich A, Heuer VB, Herrmann M, Hinrichs KU, Küsel K.

FEMS Microbiol Ecol. 2012 Aug;81(2):339-54. doi: 10.1111/j.1574-6941.2012.01352.x. Epub 2012 Apr 4.


Calcite biomineralization by bacterial isolates from the recently discovered pristine karstic herrenberg cave.

Rusznyák A, Akob DM, Nietzsche S, Eusterhues K, Totsche KU, Neu TR, Frosch T, Popp J, Keiner R, Geletneky J, Katzschmann L, Schulze ED, Küsel K.

Appl Environ Microbiol. 2012 Feb;78(4):1157-67. doi: 10.1128/AEM.06568-11. Epub 2011 Dec 16.

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