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Items: 28

1.

Short-term high-fat diet feeding protects from the development of experimental allergic asthma in mice.

Schröder T, Wiese AV, Ender F, Quell KM, Vollbrandt T, Duhn J, Sünderhauf A, Künstner A, Moreno-Fernandez ME, Derer S, Aherrahrou Z, Lewkowich I, Divanovic S, Sina C, Köhl J, Laumonnier Y.

Clin Exp Allergy. 2019 Jul 2. doi: 10.1111/cea.13454. [Epub ahead of print]

PMID:
31265181
2.

A Natural mtDNA Polymorphism in Complex III Is a Modifier of Healthspan in Mice.

Hirose M, Künstner A, Schilf P, Tietjen AK, Jöhren O, Huebbe P, Rimbach G, Rupp J, Schwaninger M, Busch H, Ibrahim SM.

Int J Mol Sci. 2019 May 13;20(9). pii: E2359. doi: 10.3390/ijms20092359.

3.

Combined culture and metagenomic analyses reveal significant shifts in the composition of the cutaneous microbiome in psoriasis.

Langan EA, Künstner A, Miodovnik M, Zillikens D, Thaçi D, Baines JF, Ibrahim SM, Solbach W, Knobloch JK.

Br J Dermatol. 2019 Apr 15. doi: 10.1111/bjd.17989. [Epub ahead of print]

PMID:
30985920
4.

Dietary ursolic acid improves health span and life span in male Drosophila melanogaster.

Staats S, Wagner AE, Lüersen K, Künstner A, Meyer T, Kahns AK, Derer S, Graspeuntner S, Rupp J, Busch H, Sina C, Ipharraguerre IR, Rimbach G.

Biofactors. 2019 Mar;45(2):169-186. doi: 10.1002/biof.1467. Epub 2018 Nov 29.

PMID:
30496629
5.

IL-17A is functionally relevant and a potential therapeutic target in bullous pemphigoid.

Chakievska L, Holtsche MM, Künstner A, Goletz S, Petersen BS, Thaci D, Ibrahim SM, Ludwig RJ, Franke A, Sadik CD, Zillikens D, Hölscher C, Busch H, Schmidt E.

J Autoimmun. 2019 Jan;96:104-112. doi: 10.1016/j.jaut.2018.09.003. Epub 2018 Sep 13.

6.

Low-level mitochondrial heteroplasmy modulates DNA replication, glucose metabolism and lifespan in mice.

Hirose M, Schilf P, Gupta Y, Zarse K, Künstner A, Fähnrich A, Busch H, Yin J, Wright MN, Ziegler A, Vallier M, Belheouane M, Baines JF, Tautz D, Johann K, Oelkrug R, Mittag J, Lehnert H, Othman A, Jöhren O, Schwaninger M, Prehn C, Adamski J, Shima K, Rupp J, Häsler R, Fuellen G, Köhling R, Ristow M, Ibrahim SM.

Sci Rep. 2018 Apr 12;8(1):5872. doi: 10.1038/s41598-018-24290-6.

7.

Mitochondrial gene polymorphism is associated with gut microbial communities in mice.

Hirose M, Künstner A, Schilf P, Sünderhauf A, Rupp J, Jöhren O, Schwaninger M, Sina C, Baines JF, Ibrahim SM.

Sci Rep. 2017 Nov 10;7(1):15293. doi: 10.1038/s41598-017-15377-7.

8.

Circadian rhythm disruption impairs tissue homeostasis and exacerbates chronic inflammation in the intestine.

Pagel R, Bär F, Schröder T, Sünderhauf A, Künstner A, Ibrahim SM, Autenrieth SE, Kalies K, König P, Tsang AH, Bettenworth D, Divanovic S, Lehnert H, Fellermann K, Oster H, Derer S, Sina C.

FASEB J. 2017 Nov;31(11):4707-4719. doi: 10.1096/fj.201700141RR. Epub 2017 Jul 14.

9.

Gut microbiota in Parkinson disease in a northern German cohort.

Hopfner F, Künstner A, Müller SH, Künzel S, Zeuner KE, Margraf NG, Deuschl G, Baines JF, Kuhlenbäumer G.

Brain Res. 2017 Jul 15;1667:41-45. doi: 10.1016/j.brainres.2017.04.019. Epub 2017 May 12.

PMID:
28506555
10.

A distinct cutaneous microbiota profile in autoimmune bullous disease patients.

Miodovnik M, Künstner A, Langan EA, Zillikens D, Gläser R, Sprecher E, Baines JF, Schmidt E, Ibrahim SM.

Exp Dermatol. 2017 Dec;26(12):1221-1227. doi: 10.1111/exd.13357. Epub 2017 Aug 29.

PMID:
28418589
11.

The Genome of the Trinidadian Guppy, Poecilia reticulata, and Variation in the Guanapo Population.

Künstner A, Hoffmann M, Fraser BA, Kottler VA, Sharma E, Weigel D, Dreyer C.

PLoS One. 2016 Dec 29;11(12):e0169087. doi: 10.1371/journal.pone.0169087. eCollection 2016.

12.

Mitochondrial gene polymorphisms alter hepatic cellular energy metabolism and aggravate diet-induced non-alcoholic steatohepatitis.

Schröder T, Kucharczyk D, Bär F, Pagel R, Derer S, Jendrek ST, Sünderhauf A, Brethack AK, Hirose M, Möller S, Künstner A, Bischof J, Weyers I, Heeren J, Koczan D, Schmid SM, Divanovic S, Giles DA, Adamski J, Fellermann K, Lehnert H, Köhl J, Ibrahim S, Sina C.

Mol Metab. 2016 Feb 2;5(4):283-295. doi: 10.1016/j.molmet.2016.01.010. eCollection 2016 Apr.

13.

Divergence in gene expression within and between two closely related flycatcher species.

Uebbing S, Künstner A, Mäkinen H, Backström N, Bolivar P, Burri R, Dutoit L, Mugal CF, Nater A, Aken B, Flicek P, Martin FJ, Searle SM, Ellegren H.

Mol Ecol. 2016 May;25(9):2015-28. doi: 10.1111/mec.13596. Epub 2016 Apr 2.

14.

Adenylate cyclase 5 is required for melanophore and male pattern development in the guppy (Poecilia reticulata).

Kottler VA, Künstner A, Koch I, Flötenmeyer M, Langenecker T, Hoffmann M, Sharma E, Weigel D, Dreyer C.

Pigment Cell Melanoma Res. 2015 Sep;28(5):545-58. doi: 10.1111/pcmr.12386. Epub 2015 Jul 17.

PMID:
26079969
15.

Pheomelanin in fish?

Kottler VA, Künstner A, Schartl M.

Pigment Cell Melanoma Res. 2015 May;28(3):355-6. doi: 10.1111/pcmr.12359. Epub 2015 Mar 6. No abstract available.

PMID:
25660115
16.

Population genomics of natural and experimental populations of guppies (Poecilia reticulata).

Fraser BA, Künstner A, Reznick DN, Dreyer C, Weigel D.

Mol Ecol. 2015 Jan;24(2):389-408. doi: 10.1111/mec.13022. Epub 2015 Jan 7.

PMID:
25444454
17.

Transcriptome assemblies for studying sex-biased gene expression in the guppy, Poecilia reticulata.

Sharma E, Künstner A, Fraser BA, Zipprich G, Kottler VA, Henz SR, Weigel D, Dreyer C.

BMC Genomics. 2014 May 26;15:400. doi: 10.1186/1471-2164-15-400.

18.

Transcriptome sequencing reveals the character of incomplete dosage compensation across multiple tissues in flycatchers.

Uebbing S, Künstner A, Mäkinen H, Ellegren H.

Genome Biol Evol. 2013;5(8):1555-66. doi: 10.1093/gbe/evt114.

19.

The genomic landscape of species divergence in Ficedula flycatchers.

Ellegren H, Smeds L, Burri R, Olason PI, Backström N, Kawakami T, Künstner A, Mäkinen H, Nadachowska-Brzyska K, Qvarnström A, Uebbing S, Wolf JB.

Nature. 2012 Nov 29;491(7426):756-60. doi: 10.1038/nature11584. Epub 2012 Oct 24.

PMID:
23103876
20.

Challenges and strategies in transcriptome assembly and differential gene expression quantification. A comprehensive in silico assessment of RNA-seq experiments.

Vijay N, Poelstra JW, Künstner A, Wolf JB.

Mol Ecol. 2013 Feb;22(3):620-34. doi: 10.1111/mec.12014. Epub 2012 Sep 24.

PMID:
22998089
21.

Significant selective constraint at 4-fold degenerate sites in the avian genome and its consequence for detection of positive selection.

Künstner A, Nabholz B, Ellegren H.

Genome Biol Evol. 2011;3:1381-9. doi: 10.1093/gbe/evr112. Epub 2011 Oct 31.

22.

ConDeTri--a content dependent read trimmer for Illumina data.

Smeds L, Künstner A.

PLoS One. 2011;6(10):e26314. doi: 10.1371/journal.pone.0026314. Epub 2011 Oct 19.

23.

Dynamic evolution of base composition: causes and consequences in avian phylogenomics.

Nabholz B, Künstner A, Wang R, Jarvis ED, Ellegren H.

Mol Biol Evol. 2011 Aug;28(8):2197-210. doi: 10.1093/molbev/msr047. Epub 2011 Apr 4.

24.

Evolutionary constraint in flanking regions of avian genes.

Künstner A, Nabholz B, Ellegren H.

Mol Biol Evol. 2011 Sep;28(9):2481-9. doi: 10.1093/molbev/msr066. Epub 2011 Apr 4.

PMID:
21393603
25.

Molecular evolution of genes in avian genomes.

Nam K, Mugal C, Nabholz B, Schielzeth H, Wolf JB, Backström N, Künstner A, Balakrishnan CN, Heger A, Ponting CP, Clayton DF, Ellegren H.

Genome Biol. 2010;11(6):R68. doi: 10.1186/gb-2010-11-6-r68. Epub 2010 Jun 23.

26.

The genome of a songbird.

Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Künstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Lin YC, George J, Sweedler J, Southey B, Gunaratne P, Watson M, Nam K, Backström N, Smeds L, Nabholz B, Itoh Y, Whitney O, Pfenning AR, Howard J, Völker M, Skinner BM, Griffin DK, Ye L, McLaren WM, Flicek P, Quesada V, Velasco G, Lopez-Otin C, Puente XS, Olender T, Lancet D, Smit AF, Hubley R, Konkel MK, Walker JA, Batzer MA, Gu W, Pollock DD, Chen L, Cheng Z, Eichler EE, Stapley J, Slate J, Ekblom R, Birkhead T, Burke T, Burt D, Scharff C, Adam I, Richard H, Sultan M, Soldatov A, Lehrach H, Edwards SV, Yang SP, Li X, Graves T, Fulton L, Nelson J, Chinwalla A, Hou S, Mardis ER, Wilson RK.

Nature. 2010 Apr 1;464(7289):757-62. doi: 10.1038/nature08819.

27.

Comparative genomics based on massive parallel transcriptome sequencing reveals patterns of substitution and selection across 10 bird species.

Künstner A, Wolf JB, Backström N, Whitney O, Balakrishnan CN, Day L, Edwards SV, Janes DE, Schlinger BA, Wilson RK, Jarvis ED, Warren WC, Ellegren H.

Mol Ecol. 2010 Mar;19 Suppl 1:266-76. doi: 10.1111/j.1365-294X.2009.04487.x. Erratum in: Mol Ecol. 2011 Jul;20(13):2871.

28.

Nonlinear dynamics of nonsynonymous (dN) and synonymous (dS) substitution rates affects inference of selection.

Wolf JB, Künstner A, Nam K, Jakobsson M, Ellegren H.

Genome Biol Evol. 2009 Aug 13;1:308-19. doi: 10.1093/gbe/evp030.

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