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Items: 32

1.

Biogas yields and composition from oil-extracted halophilic algae residues in conventional biogas plants operated at high salinities.

Adamietz T, Jurkowski W, Adolph J, Brück TB.

Bioprocess Biosyst Eng. 2019 Aug 7. doi: 10.1007/s00449-019-02185-8. [Epub ahead of print]

PMID:
31392571
2.

Rare coding variants in genes encoding GABAA receptors in genetic generalised epilepsies: an exome-based case-control study.

May P, Girard S, Harrer M, Bobbili DR, Schubert J, Wolking S, Becker F, Lachance-Touchette P, Meloche C, Gravel M, Niturad CE, Knaus J, De Kovel C, Toliat M, Polvi A, Iacomino M, Guerrero-López R, Baulac S, Marini C, Thiele H, Altmüller J, Jabbari K, Ruppert AK, Jurkowski W, Lal D, Rusconi R, Cestèle S, Terragni B, Coombs ID, Reid CA, Striano P, Caglayan H, Siren A, Everett K, Møller RS, Hjalgrim H, Muhle H, Helbig I, Kunz WS, Weber YG, Weckhuysen S, Jonghe P, Sisodiya SM, Nabbout R, Franceschetti S, Coppola A, Vari MS, Kasteleijn-Nolst Trenité D, Baykan B, Ozbek U, Bebek N, Klein KM, Rosenow F, Nguyen DK, Dubeau F, Carmant L, Lortie A, Desbiens R, Clément JF, Cieuta-Walti C, Sills GJ, Auce P, Francis B, Johnson MR, Marson AG, Berghuis B, Sander JW, Avbersek A, McCormack M, Cavalleri GL, Delanty N, Depondt C, Krenn M, Zimprich F, Peter S, Nikanorova M, Kraaij R, van Rooij J, Balling R, Ikram MA, Uitterlinden AG, Avanzini G, Schorge S, Petrou S, Mantegazza M, Sander T, LeGuern E, Serratosa JM, Koeleman BPC, Palotie A, Lehesjoki AE, Nothnagel M, Nürnberg P, Maljevic S, Zara F, Cossette P, Krause R, Lerche H; Epicure Consortium; EuroEPINOMICS CoGIE Consortium; EpiPGX Consortium.

Lancet Neurol. 2018 Aug;17(8):699-708. doi: 10.1016/S1474-4422(18)30215-1. Epub 2018 Jul 17.

3.

Effect of Cabbage Wraps on the Reduction of Post-Traumatic Knee Exudates in Men.

Dygut J, Piwowar M, Fijałkowska K, Guevara I, Jakubas R, Gonzales G, Popławski K, Strokowska A, Wikariak H, Jurkowski W.

J Altern Complement Med. 2018 Nov;24(11):1113-1119. doi: 10.1089/acm.2017.0304. Epub 2018 May 21.

PMID:
29782183
4.

Exome-wide analysis of mutational burden in patients with typical and atypical Rolandic epilepsy.

Bobbili DR, Lal D, May P, Reinthaler EM, Jabbari K, Thiele H, Nothnagel M, Jurkowski W, Feucht M, Nürnberg P, Lerche H, Zimprich F, Krause R, Neubauer BA, Reinthaler EM, Zimprich F, Feucht M, Steinböck H, Neophytou B, Geldner J, Gruber-Sedlmayr U, Haberlandt E, Ronen GM, Altmüller J, Lal D, Nürnberg P, Sander T, Thiele H, Krause R, May P, Balling R, Lerche H, Neubauer BA; EUROEPINOMICS COGIE Consortium.

Eur J Hum Genet. 2018 Feb;26(2):258-264. doi: 10.1038/s41431-017-0034-x. Epub 2018 Jan 22.

5.

Introducing the Brassica Information Portal: Towards integrating genotypic and phenotypic Brassica crop data.

Eckes AH, Gubała T, Nowakowski P, Szymczyszyn T, Wells R, Irwin JA, Horro C, Hancock JM, King G, Dyer SC, Jurkowski W.

Version 2. F1000Res. 2017 Apr 12 [revised 2017 Jan 1];6:465. doi: 10.12688/f1000research.11301.2. eCollection 2017.

6.

Increased transcriptional and metabolic capacity for lipid metabolism in the peripheral zone of the prostate may underpin its increased susceptibility to cancer.

Al Kadhi O, Traka MH, Melchini A, Troncoso-Rey P, Jurkowski W, Defernez M, Pachori P, Mills RD, Ball RY, Mithen RF.

Oncotarget. 2017 May 17;8(49):84902-84916. doi: 10.18632/oncotarget.17926. eCollection 2017 Oct 17.

7.

Polycomb repressive complex PRC1 spatially constrains the mouse embryonic stem cell genome.

Schoenfelder S, Sugar R, Dimond A, Javierre BM, Armstrong H, Mifsud B, Dimitrova E, Matheson L, Tavares-Cadete F, Furlan-Magaril M, Segonds-Pichon A, Jurkowski W, Wingett SW, Tabbada K, Andrews S, Herman B, LeProust E, Osborne CS, Koseki H, Fraser P, Luscombe NM, Elderkin S.

Nat Genet. 2015 Oct;47(10):1179-1186. doi: 10.1038/ng.3393. Epub 2015 Aug 31.

8.

DNA microarray integromics analysis platform.

Waller T, Gubała T, Sarapata K, Piwowar M, Jurkowski W.

BioData Min. 2015 Jun 25;8:18. doi: 10.1186/s13040-015-0052-6. eCollection 2015.

9.

ONION: Functional Approach for Integration of Lipidomics and Transcriptomics Data.

Piwowar M, Jurkowski W.

PLoS One. 2015 Jun 8;10(6):e0128854. doi: 10.1371/journal.pone.0128854. eCollection 2015.

10.

Hippocampal extracellular matrix levels and stochasticity in synaptic protein expression increase with age and are associated with age-dependent cognitive decline.

Végh MJ, Rausell A, Loos M, Heldring CM, Jurkowski W, van Nierop P, Paliukhovich I, Li KW, del Sol A, Smit AB, Spijker S, van Kesteren RE.

Mol Cell Proteomics. 2014 Nov;13(11):2975-85. doi: 10.1074/mcp.M113.032086. Epub 2014 Jul 20.

11.

Analysis of ELP4, SRPX2, and interacting genes in typical and atypical rolandic epilepsy.

Reinthaler EM, Lal D, Jurkowski W, Feucht M, Steinböck H, Gruber-Sedlmayr U, Ronen GM, Geldner J, Haberlandt E, Neophytou B, Hahn A, Altmüller J, Thiele H, Toliat MR; EuroEPINOMICS Consortium, Lerche H, Nürnberg P, Sander T, Neubauer BA, Zimprich F.

Epilepsia. 2014 Aug;55(8):e89-93. doi: 10.1111/epi.12712. Epub 2014 Jul 3.

12.

Detecting cellular reprogramming determinants by differential stability analysis of gene regulatory networks.

Crespo I, Perumal TM, Jurkowski W, del Sol A.

BMC Syst Biol. 2013 Dec 19;7:140. doi: 10.1186/1752-0509-7-140.

13.

Integrating pathways of Parkinson's disease in a molecular interaction map.

Fujita KA, Ostaszewski M, Matsuoka Y, Ghosh S, Glaab E, Trefois C, Crespo I, Perumal TM, Jurkowski W, Antony PM, Diederich N, Buttini M, Kodama A, Satagopam VP, Eifes S, Del Sol A, Schneider R, Kitano H, Balling R.

Mol Neurobiol. 2014 Feb;49(1):88-102. doi: 10.1007/s12035-013-8489-4. Epub 2013 Jul 7. Review.

14.

Ligand binding properties of human galanin receptors.

Jurkowski W, Yazdi S, Elofsson A.

Mol Membr Biol. 2013 Mar;30(2):206-16. doi: 10.3109/09687688.2012.750384. Epub 2012 Dec 13.

PMID:
23237663
15.

Gene regulatory network analysis supports inflammation as a key neurodegeneration process in prion disease.

Crespo I, Roomp K, Jurkowski W, Kitano H, del Sol A.

BMC Syst Biol. 2012 Oct 15;6:132. doi: 10.1186/1752-0509-6-132.

16.

The C-terminal cavity of the Na,K-ATPase analyzed by docking and electrophysiology.

Paulsen PA, Jurkowski W, Apostolov R, Lindahl E, Nissen P, Poulsen H.

Mol Membr Biol. 2013 Mar;30(2):195-205. doi: 10.3109/09687688.2012.713520. Epub 2012 Aug 22.

PMID:
22913437
17.

Identification of selective inhibitors of the potassium channel Kv1.1-1.2((3)) by high-throughput virtual screening and automated patch clamp.

Wacker SJ, Jurkowski W, Simmons KJ, Fishwick CW, Johnson AP, Madge D, Lindahl E, Rolland JF, de Groot BL.

ChemMedChem. 2012 Oct;7(10):1775-83. doi: 10.1002/cmdc.201100600. Epub 2012 Mar 30.

18.

Intermediates in the protein folding process: a computational model.

Roterman I, Konieczny L, Banach M, Jurkowski W.

Int J Mol Sci. 2011;12(8):4850-60. doi: 10.3390/ijms11084850. Epub 2011 Jul 29.

19.

PPARγ population shift produces disease-related changes in molecular networks associated with metabolic syndrome.

Jurkowski W, Roomp K, Crespo I, Schneider JG, Del Sol A.

Cell Death Dis. 2011 Aug 11;2:e192. doi: 10.1038/cddis.2011.74.

20.

The complement regulator CD46 is bactericidal to Helicobacter pylori and blocks urease activity.

Basmarke-Wehelie R, Sjölinder H, Jurkowski W, Elofsson A, Arnqvist A, Engstrand L, Hagner M, Wallin E, Guan N, Kuranasekera H, Aro H, Jonsson AB.

Gastroenterology. 2011 Sep;141(3):918-28. doi: 10.1053/j.gastro.2011.05.009. Epub 2011 May 18.

PMID:
21699774
21.

Geometric parameters defining the structure of proteins--relation to early-stage folding step.

Jurkowski W, Kułaga T, Roterman I.

J Biomol Struct Dyn. 2011 Aug;29(1):79-104.

PMID:
21696227
22.

Two-intermediate model to characterize the structure of fast-folding proteins.

Roterman I, Konieczny L, Jurkowski W, Prymula K, Banach M.

J Theor Biol. 2011 Aug 21;283(1):60-70. doi: 10.1016/j.jtbi.2011.05.027. Epub 2011 May 27.

PMID:
21635900
23.

Fuzzy oil drop model to interpret the structure of antifreeze proteins and their mutants.

Banach M, Prymula K, Jurkowski W, Konieczny L, Roterman I.

J Mol Model. 2012 Jan;18(1):229-37. doi: 10.1007/s00894-011-1033-4. Epub 2011 Apr 27.

24.

Determining receptor-ligand interaction of human galanin receptor type 3.

Runesson J, Sollenberg UE, Jurkowski W, Yazdi S, Eriksson EE, Elofsson A, Langel U.

Neurochem Int. 2010 Dec;57(7):804-11. doi: 10.1016/j.neuint.2010.08.018. Epub 2010 Sep 9.

PMID:
20817064
25.

Serum albumin complexation of acetylsalicylic acid metabolites.

Jurkowski W, Porebski G, Obtułowicz K, Roterman I.

Curr Drug Metab. 2009 Jun;10(5):448-58.

PMID:
19689242
26.

Prediction of functional sites based on the fuzzy oil drop model.

Bryliński M, Prymula K, Jurkowski W, Kochańczyk M, Stawowczyk E, Konieczny L, Roterman I.

PLoS Comput Biol. 2007 May;3(5):e94. Epub 2007 Apr 12.

27.

The indirect generation of long-distance structural changes in antibodies upon their binding to antigen.

Piekarska B, Drozd A, Konieczny L, Król M, Jurkowski W, Roterman I, Spólnik P, Stopa B, Rybarska J.

Chem Biol Drug Des. 2006 Nov;68(5):276-83.

PMID:
17177888
28.

Early-stage folding in proteins (in silico) sequence-to-structure relation.

Brylinski M, Konieczny L, Czerwonko P, Jurkowski W, Roterman I.

J Biomed Biotechnol. 2005 Jun 30;2005(2):65-79.

29.

Lysozyme folded in silico according to the limited conformational sub-space.

Jurkowski W, Brylinski M, Konieczny L, Roterman I.

J Biomol Struct Dyn. 2004 Oct;22(2):149-58.

PMID:
15317476
30.

Conformational subspace in simulation of early-stage protein folding.

Jurkowski W, Brylinski M, Konieczny L, Wiíniowski Z, Roterman I.

Proteins. 2004 Apr 1;55(1):115-27.

PMID:
14997546
31.

Limited conformational space for early-stage protein folding simulation.

Bryliński M, Jurkowski W, Konieczny L, Roterman I.

Bioinformatics. 2004 Jan 22;20(2):199-205.

PMID:
14734311
32.

[Radiologic picture of diaphragmatic rupture with translocation of the viscera into the thoracic cavity].

Smilgin B, Jurkowski W, Klement Z.

Pneumonol Pol. 1976;44(10):955-61. Polish. No abstract available.

PMID:
995704

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