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Items: 1 to 50 of 177

1.

Direct visualization of single nuclear pore complex proteins using genetically-encoded probes for DNA-PAINT.

Schlichthaerle T, Strauss M, Schueder F, Auer A, Nijmeijer B, Kueblbeck M, Jimenez Sabinina V, Thevathasan J, Ries J, Ellenberg J, Jungmann R.

Angew Chem Int Ed Engl. 2019 Jul 17. doi: 10.1002/anie.201905685. [Epub ahead of print]

PMID:
31314157
2.

The nucleolus functions as a phase-separated protein quality control compartment.

Frottin F, Schueder F, Tiwary S, Gupta R, Körner R, Schlichthaerle T, Cox J, Jungmann R, Hartl FU, Hipp MS.

Science. 2019 Jul 11. pii: eaaw9157. doi: 10.1126/science.aaw9157. [Epub ahead of print]

PMID:
31296649
3.

Visualization of Bacterial Protein Complexes Labeled with Fluorescent Proteins and Nanobody Binders for STED Microscopy.

Cramer K, Bolender AL, Stockmar I, Jungmann R, Kasper R, Shin JY.

Int J Mol Sci. 2019 Jul 10;20(14). pii: E3376. doi: 10.3390/ijms20143376.

4.

Flat-top TIRF illumination boosts DNA-PAINT imaging and quantification.

Stehr F, Stein J, Schueder F, Schwille P, Jungmann R.

Nat Commun. 2019 Mar 20;10(1):1268. doi: 10.1038/s41467-019-09064-6.

5.

124-Color Super-resolution Imaging by Engineering DNA-PAINT Blinking Kinetics.

Wade OK, Woehrstein JB, Nickels PC, Strauss S, Stehr F, Stein J, Schueder F, Strauss MT, Ganji M, Schnitzbauer J, Grabmayr H, Yin P, Schwille P, Jungmann R.

Nano Lett. 2019 Apr 10;19(4):2641-2646. doi: 10.1021/acs.nanolett.9b00508. Epub 2019 Mar 13.

6.

The centrosome protein AKNA regulates neurogenesis via microtubule organization.

Camargo Ortega G, Falk S, Johansson PA, Peyre E, Broix L, Sahu SK, Hirst W, Schlichthaerle T, De Juan Romero C, Draganova K, Vinopal S, Chinnappa K, Gavranovic A, Karakaya T, Steininger T, Merl-Pham J, Feederle R, Shao W, Shi SH, Hauck SM, Jungmann R, Bradke F, Borrell V, Geerlof A, Reber S, Tiwari VK, Huttner WB, Wilsch-Bräuninger M, Nguyen L, Götz M.

Nature. 2019 Mar;567(7746):113-117. doi: 10.1038/s41586-019-0962-4. Epub 2019 Feb 20.

PMID:
30787442
7.

Bacterially Derived Antibody Binders as Small Adapters for DNA-PAINT Microscopy.

Schlichthaerle T, Ganji M, Auer A, Kimbu Wade O, Jungmann R.

Chembiochem. 2019 Apr 15;20(8):1032-1038. doi: 10.1002/cbic.201800743. Epub 2019 Mar 19.

PMID:
30589198
8.

Single Particle Tracking and Super-Resolution Imaging of Membrane-Assisted Stop-and-Go Diffusion and Lattice Assembly of DNA Origami.

Kempter S, Khmelinskaia A, Strauss MT, Schwille P, Jungmann R, Liedl T, Bae W.

ACS Nano. 2019 Feb 26;13(2):996-1002. doi: 10.1021/acsnano.8b04631. Epub 2019 Jan 7.

PMID:
30588792
9.

Photo-Induced Depletion of Binding Sites in DNA-PAINT Microscopy.

Blumhardt P, Stein J, Mücksch J, Stehr F, Bauer J, Jungmann R, Schwille P.

Molecules. 2018 Nov 30;23(12). pii: E3165. doi: 10.3390/molecules23123165.

10.

Organellar Proteomics and Phospho-Proteomics Reveal Subcellular Reorganization in Diet-Induced Hepatic Steatosis.

Krahmer N, Najafi B, Schueder F, Quagliarini F, Steger M, Seitz S, Kasper R, Salinas F, Cox J, Uhlenhaut NH, Walther TC, Jungmann R, Zeigerer A, Borner GHH, Mann M.

Dev Cell. 2018 Oct 22;47(2):205-221.e7. doi: 10.1016/j.devcel.2018.09.017.

PMID:
30352176
11.

DNA Origami Route for Nanophotonics.

Kuzyk A, Jungmann R, Acuna GP, Liu N.

ACS Photonics. 2018 Apr 18;5(4):1151-1163. doi: 10.1021/acsphotonics.7b01580. Epub 2018 Feb 12. Review.

12.

Direct induction of microtubule branching by microtubule nucleation factor SSNA1.

Basnet N, Nedozralova H, Crevenna AH, Bodakuntla S, Schlichthaerle T, Taschner M, Cardone G, Janke C, Jungmann R, Magiera MM, Biertümpfel C, Mizuno N.

Nat Cell Biol. 2018 Oct;20(10):1172-1180. doi: 10.1038/s41556-018-0199-8. Epub 2018 Sep 24.

13.

2D melting of confined colloids with a mixture of square and triangular order.

Jungmann RM, Pereira PCN, Apolinario SWS.

J Phys Condens Matter. 2018 Nov 21;30(46):465402. doi: 10.1088/1361-648X/aae3c5. Epub 2018 Sep 24.

PMID:
30247148
14.

Template-free 2D particle fusion in localization microscopy.

Heydarian H, Schueder F, Strauss MT, van Werkhoven B, Fazel M, Lidke KA, Jungmann R, Stallinga S, Rieger B.

Nat Methods. 2018 Oct;15(10):781-784. doi: 10.1038/s41592-018-0136-6. Epub 2018 Sep 17.

PMID:
30224671
15.

Nanometer-scale Multiplexed Super-Resolution Imaging with an Economic 3D-DNA-PAINT Microscope.

Auer A, Schlichthaerle T, Woehrstein JB, Schueder F, Strauss MT, Grabmayr H, Jungmann R.

Chemphyschem. 2018 Nov 19;19(22):3024-3034. doi: 10.1002/cphc.201800630. Epub 2018 Oct 8.

PMID:
30207624
16.

Modified aptamers enable quantitative sub-10-nm cellular DNA-PAINT imaging.

Strauss S, Nickels PC, Strauss MT, Jimenez Sabinina V, Ellenberg J, Carter JD, Gupta S, Janjic N, Jungmann R.

Nat Methods. 2018 Sep;15(9):685-688. doi: 10.1038/s41592-018-0105-0. Epub 2018 Aug 20.

17.

Correlative Single-Molecule FRET and DNA-PAINT Imaging.

Deußner-Helfmann NS, Auer A, Strauss MT, Malkusch S, Dietz MS, Barth HD, Jungmann R, Heilemann M.

Nano Lett. 2018 Jul 11;18(7):4626-4630. doi: 10.1021/acs.nanolett.8b02185. Epub 2018 Jun 29.

PMID:
29943993
18.

Site-Specific Labeling of Affimers for DNA-PAINT Microscopy.

Schlichthaerle T, Eklund AS, Schueder F, Strauss MT, Tiede C, Curd A, Ries J, Peckham M, Tomlinson DC, Jungmann R.

Angew Chem Int Ed Engl. 2018 Aug 20;57(34):11060-11063. doi: 10.1002/anie.201804020. Epub 2018 Jul 15.

19.

Quantifying absolute addressability in DNA origami with molecular resolution.

Strauss MT, Schueder F, Haas D, Nickels PC, Jungmann R.

Nat Commun. 2018 Apr 23;9(1):1600. doi: 10.1038/s41467-018-04031-z.

20.

Molecular mechanism to recruit galectin-3 into multivesicular bodies for polarized exosomal secretion.

Bänfer S, Schneider D, Dewes J, Strauss MT, Freibert SA, Heimerl T, Maier UG, Elsässer HP, Jungmann R, Jacob R.

Proc Natl Acad Sci U S A. 2018 May 8;115(19):E4396-E4405. doi: 10.1073/pnas.1718921115. Epub 2018 Apr 23.

21.

Quantifying Reversible Surface Binding via Surface-Integrated Fluorescence Correlation Spectroscopy.

Mücksch J, Blumhardt P, Strauss MT, Petrov EP, Jungmann R, Schwille P.

Nano Lett. 2018 May 9;18(5):3185-3192. doi: 10.1021/acs.nanolett.8b00875. Epub 2018 Apr 18.

22.

Multiplexed 3D super-resolution imaging of whole cells using spinning disk confocal microscopy and DNA-PAINT.

Schueder F, Lara-Gutiérrez J, Beliveau BJ, Saka SK, Sasaki HM, Woehrstein JB, Strauss MT, Grabmayr H, Yin P, Jungmann R.

Nat Commun. 2017 Dec 12;8(1):2090. doi: 10.1038/s41467-017-02028-8.

23.

Programmable self-assembly of three-dimensional nanostructures from 10,000 unique components.

Ong LL, Hanikel N, Yaghi OK, Grun C, Strauss MT, Bron P, Lai-Kee-Him J, Schueder F, Wang B, Wang P, Kishi JY, Myhrvold C, Zhu A, Jungmann R, Bellot G, Ke Y, Yin P.

Nature. 2017 Dec 6;552(7683):72-77. doi: 10.1038/nature24648.

24.

Multiplexed Exchange-PAINT imaging reveals ligand-dependent EGFR and Met interactions in the plasma membrane.

Werbin JL, Avendaño MS, Becker V, Jungmann R, Yin P, Danuser G, Sorger PK.

Sci Rep. 2017 Sep 22;7(1):12150. doi: 10.1038/s41598-017-12257-y.

25.

Rapid Sequential in Situ Multiplexing with DNA Exchange Imaging in Neuronal Cells and Tissues.

Wang Y, Woehrstein JB, Donoghue N, Dai M, Avendaño MS, Schackmann RCJ, Zoeller JJ, Wang SSH, Tillberg PW, Park D, Lapan SW, Boyden ES, Brugge JS, Kaeser PS, Church GM, Agasti SS, Jungmann R, Yin P.

Nano Lett. 2017 Oct 11;17(10):6131-6139. doi: 10.1021/acs.nanolett.7b02716. Epub 2017 Oct 2.

26.

Fast, Background-Free DNA-PAINT Imaging Using FRET-Based Probes.

Auer A, Strauss MT, Schlichthaerle T, Jungmann R.

Nano Lett. 2017 Oct 11;17(10):6428-6434. doi: 10.1021/acs.nanolett.7b03425. Epub 2017 Sep 21.

PMID:
28871786
27.

Sub-100-nm metafluorophores with digitally tunable optical properties self-assembled from DNA.

Woehrstein JB, Strauss MT, Ong LL, Wei B, Zhang DY, Jungmann R, Yin P.

Sci Adv. 2017 Jun 21;3(6):e1602128. doi: 10.1126/sciadv.1602128. eCollection 2017 Jun.

28.

Super-resolution microscopy with DNA-PAINT.

Schnitzbauer J, Strauss MT, Schlichthaerle T, Schueder F, Jungmann R.

Nat Protoc. 2017 Jun;12(6):1198-1228. doi: 10.1038/nprot.2017.024. Epub 2017 May 18.

PMID:
28518172
29.

DNA-barcoded labeling probes for highly multiplexed Exchange-PAINT imaging.

Agasti SS, Wang Y, Schueder F, Sukumar A, Jungmann R, Yin P.

Chem Sci. 2017 Apr 1;8(4):3080-3091. doi: 10.1039/c6sc05420j. Epub 2017 Jan 30.

30.

Universal Super-Resolution Multiplexing by DNA Exchange.

Schueder F, Strauss MT, Hoerl D, Schnitzbauer J, Schlichthaerle T, Strauss S, Yin P, Harz H, Leonhardt H, Jungmann R.

Angew Chem Int Ed Engl. 2017 Mar 27;56(14):4052-4055. doi: 10.1002/anie.201611729. Epub 2017 Mar 3.

31.

Optical imaging of individual biomolecules in densely packed clusters.

Dai M, Jungmann R, Yin P.

Nat Nanotechnol. 2016 Sep;11(9):798-807. doi: 10.1038/nnano.2016.95. Epub 2016 Jul 4.

32.

Overcoming obstacles in localization microscopy.

Jungmann R.

Nat Methods. 2016 Apr;13(4):301-2. doi: 10.1038/nmeth.3813. No abstract available.

PMID:
27027587
33.

Quantitative super-resolution imaging with qPAINT.

Jungmann R, Avendaño MS, Dai M, Woehrstein JB, Agasti SS, Feiger Z, Rodal A, Yin P.

Nat Methods. 2016 May;13(5):439-42. doi: 10.1038/nmeth.3804. Epub 2016 Mar 28.

34.

DNA nanotechnology and fluorescence applications.

Schlichthaerle T, Strauss MT, Schueder F, Woehrstein JB, Jungmann R.

Curr Opin Biotechnol. 2016 Jun;39:41-47. doi: 10.1016/j.copbio.2015.12.014. Epub 2016 Jan 13. Review.

PMID:
26773303
35.

Controlled Co-reconstitution of Multiple Membrane Proteins in Lipid Bilayer Nanodiscs Using DNA as a Scaffold.

Raschle T, Lin C, Jungmann R, Shih WM, Wagner G.

ACS Chem Biol. 2015 Nov 20;10(11):2448-54. doi: 10.1021/acschembio.5b00627. Epub 2015 Sep 21.

36.

Routing of individual polymers in designed patterns.

Knudsen JB, Liu L, Bank Kodal AL, Madsen M, Li Q, Song J, Woehrstein JB, Wickham SF, Strauss MT, Schueder F, Vinther J, Krissanaprasit A, Gudnason D, Smith AA, Ogaki R, Zelikin AN, Besenbacher F, Birkedal V, Yin P, Shih WM, Jungmann R, Dong M, Gothelf KV.

Nat Nanotechnol. 2015 Oct;10(10):892-8. doi: 10.1038/nnano.2015.190. Epub 2015 Aug 31.

PMID:
26322946
37.

A Compact DNA Cube with Side Length 10 nm.

Scheible MB, Ong LL, Woehrstein JB, Jungmann R, Yin P, Simmel FC.

Small. 2015 Oct 21;11(39):5200-5. doi: 10.1002/smll.201501370. Epub 2015 Aug 21.

38.

Single-molecule super-resolution imaging of chromosomes and in situ haplotype visualization using Oligopaint FISH probes.

Beliveau BJ, Boettiger AN, Avendaño MS, Jungmann R, McCole RB, Joyce EF, Kim-Kiselak C, Bantignies F, Fonseka CY, Erceg J, Hannan MA, Hoang HG, Colognori D, Lee JT, Shih WM, Yin P, Zhuang X, Wu CT.

Nat Commun. 2015 May 12;6:7147. doi: 10.1038/ncomms8147.

39.

Polyhedra self-assembled from DNA tripods and characterized with 3D DNA-PAINT.

Iinuma R, Ke Y, Jungmann R, Schlichthaerle T, Woehrstein JB, Yin P.

Science. 2014 Apr 4;344(6179):65-9. doi: 10.1126/science.1250944. Epub 2014 Mar 13.

40.

DNA origami structures directly assembled from intact bacteriophages.

Nickels PC, Ke Y, Jungmann R, Smith DM, Leichsenring M, Shih WM, Liedl T, Högberg B.

Small. 2014 May 14;10(9):1765-9. doi: 10.1002/smll.201303442. Epub 2014 Feb 13. No abstract available.

PMID:
24532395
41.

Multiplexed 3D cellular super-resolution imaging with DNA-PAINT and Exchange-PAINT.

Jungmann R, Avendaño MS, Woehrstein JB, Dai M, Shih WM, Yin P.

Nat Methods. 2014 Mar;11(3):313-8. doi: 10.1038/nmeth.2835. Epub 2014 Feb 2.

42.

Design space for complex DNA structures.

Wei B, Dai M, Myhrvold C, Ke Y, Jungmann R, Yin P.

J Am Chem Soc. 2013 Dec 4;135(48):18080-8. doi: 10.1021/ja4062294. Epub 2013 Nov 20.

43.

Tug-of-war in motor protein ensembles revealed with a programmable DNA origami scaffold.

Derr ND, Goodman BS, Jungmann R, Leschziner AE, Shih WM, Reck-Peterson SL.

Science. 2012 Nov 2;338(6107):662-5. doi: 10.1126/science.1226734. Epub 2012 Oct 11.

44.

Submicrometre geometrically encoded fluorescent barcodes self-assembled from DNA.

Lin C, Jungmann R, Leifer AM, Li C, Levner D, Church GM, Shih WM, Yin P.

Nat Chem. 2012 Oct;4(10):832-9.

45.

Nanoscale imaging in DNA nanotechnology.

Jungmann R, Scheible M, Simmel FC.

Wiley Interdiscip Rev Nanomed Nanobiotechnol. 2012 Jan-Feb;4(1):66-81. doi: 10.1002/wnan.173. Epub 2011 Nov 23. Review.

PMID:
22114058
46.

Assembly and microscopic characterization of DNA origami structures.

Scheible M, Jungmann R, Simmel FC.

Adv Exp Med Biol. 2012;733:87-96. doi: 10.1007/978-94-007-2555-3_9.

PMID:
22101715
47.

Timing molecular motion and production with a synthetic transcriptional clock.

Franco E, Friedrichs E, Kim J, Jungmann R, Murray R, Winfree E, Simmel FC.

Proc Natl Acad Sci U S A. 2011 Oct 4;108(40):E784-93. doi: 10.1073/pnas.1100060108. Epub 2011 Sep 15.

48.

DNA origami-based nanoribbons: assembly, length distribution, and twist.

Jungmann R, Scheible M, Kuzyk A, Pardatscher G, Castro CE, Simmel FC.

Nanotechnology. 2011 Jul 8;22(27):275301. doi: 10.1088/0957-4484/22/27/275301. Epub 2011 May 20.

PMID:
21597145
49.

Local strain and damage mapping in single trabeculae during three-point bending tests.

Jungmann R, Szabo ME, Schitter G, Tang RY, Vashishth D, Hansma PK, Thurner PJ.

J Mech Behav Biomed Mater. 2011 May;4(4):523-34. doi: 10.1016/j.jmbbm.2010.12.009. Epub 2010 Dec 24.

50.

Locomotor and verbal distance judgments in action and vista space.

Bergmann J, Krauss E, Münch A, Jungmann R, Oberfeld D, Hecht H.

Exp Brain Res. 2011 Apr;210(1):13-23. doi: 10.1007/s00221-011-2597-z. Epub 2011 Mar 2.

PMID:
21365183

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