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Items: 1 to 50 of 52

1.

Microbial metabolism of methanol and methylamine in the Gulf of Mexico: insight into marine carbon and nitrogen cycling.

Zhuang GC, Peña-Montenegro TD, Montgomery A, Hunter KS, Joye SB.

Environ Microbiol. 2018 Dec;20(12):4543-4554. doi: 10.1111/1462-2920.14406. Epub 2018 Oct 15.

PMID:
30209867
2.

The impact of the Deepwater Horizon blowout on historic shipwreck-associated sediment microbiomes in the northern Gulf of Mexico.

Hamdan LJ, Salerno JL, Reed A, Joye SB, Damour M.

Sci Rep. 2018 Jun 28;8(1):9057. doi: 10.1038/s41598-018-27350-z.

3.

A unifying theory for top-heavy ecosystem structure in the ocean.

Woodson CB, Schramski JR, Joye SB.

Nat Commun. 2018 Jan 2;9(1):23. doi: 10.1038/s41467-017-02450-y.

4.

Characterization of a cold-active bacterium isolated from the South Pole "Ice Tunnel".

Madigan MT, Kempher ML, Bender KS, Sullivan P, Matthew Sattley W, Dohnalkova AC, Joye SB.

Extremophiles. 2017 Sep;21(5):891-901. doi: 10.1007/s00792-017-0950-2. Epub 2017 Jul 5.

PMID:
28681112
5.

Hydrocarbon composition and concentrations in the Gulf of Mexico sediments in the 3 years following the Macondo well blowout.

Babcock-Adams L, Chanton JP, Joye SB, Medeiros PM.

Environ Pollut. 2017 Oct;229:329-338. doi: 10.1016/j.envpol.2017.05.078. Epub 2017 Jun 10.

PMID:
28605720
6.

Selective quantification of DOSS in marine sediment and sediment-trap solids by LC-QTOF-MS.

Perkins MJ, Joye SB, Field JA.

Anal Bioanal Chem. 2017 Feb;409(4):971-978. doi: 10.1007/s00216-016-0010-2. Epub 2016 Nov 25.

PMID:
27888309
7.

Distinct Bacterial Communities in Surficial Seafloor Sediments Following the 2010 Deepwater Horizon Blowout.

Yang T, Speare K, McKay L, MacGregor BJ, Joye SB, Teske A.

Front Microbiol. 2016 Sep 13;7:1384. doi: 10.3389/fmicb.2016.01384. eCollection 2016.

8.

How Clonal Is Clonal? Genome Plasticity across Multicellular Segments of a "Candidatus Marithrix sp." Filament from Sulfidic, Briny Seafloor Sediments in the Gulf of Mexico.

Salman-Carvalho V, Fadeev E, Joye SB, Teske A.

Front Microbiol. 2016 Aug 3;7:1173. doi: 10.3389/fmicb.2016.01173. eCollection 2016.

9.

Microbial diversity and activity in seafloor brine lake sediments (Alaminos Canyon block 601, Gulf of Mexico).

Crespo-Medina M, Bowles MW, Samarkin VA, Hunter KS, Joye SB.

Geobiology. 2016 Sep;14(5):483-98. doi: 10.1111/gbi.12185. Epub 2016 Jul 21.

PMID:
27444236
10.

Differential effects of crude oil on denitrification and anammox, and the impact on N2O production.

Ribeiro H, Mucha AP, Azevedo I, Salgado P, Teixeira C, Almeida CMR, Joye SB, Magalhães C.

Environ Pollut. 2016 Sep;216:391-399. doi: 10.1016/j.envpol.2016.05.045. Epub 2016 Jul 7.

PMID:
27395442
11.

Reply to Prince et al.: Ability of chemical dispersants to reduce oil spill impacts remains unclear.

Kleindienst S, Seidel M, Ziervogel K, Grim S, Loftis K, Harrison S, Malkin SY, Perkins MJ, Field J, Sogin ML, Dittmar T, Passow U, Medeiros P, Joye SB.

Proc Natl Acad Sci U S A. 2016 Mar 15;113(11):E1422-3. doi: 10.1073/pnas.1600498113. Epub 2016 Mar 1. No abstract available.

12.

Chemical dispersants can suppress the activity of natural oil-degrading microorganisms.

Kleindienst S, Seidel M, Ziervogel K, Grim S, Loftis K, Harrison S, Malkin SY, Perkins MJ, Field J, Sogin ML, Dittmar T, Passow U, Medeiros PM, Joye SB.

Proc Natl Acad Sci U S A. 2015 Dec 1;112(48):14900-5. doi: 10.1073/pnas.1507380112. Epub 2015 Nov 9.

13.

Barite encrustation of benthic sulfur-oxidizing bacteria at a marine cold seep.

Stevens EW, Bailey JV, Flood BE, Jones DS, Gilhooly WP 3rd, Joye SB, Teske A, Mason OU.

Geobiology. 2015 Nov;13(6):588-603. doi: 10.1111/gbi.12154. Epub 2015 Aug 27.

14.

MARINE SCIENCE. Deepwater Horizon, 5 years on.

Joye SB.

Science. 2015 Aug 7;349(6248):592-3. doi: 10.1126/science.aab4133. No abstract available.

PMID:
26250675
15.

Groundwater controls ecological zonation of salt marsh macrophytes.

Wilson AM, Evans T, Moore W, Schutte CA, Joye SB, Hughes AH, Anderson JL.

Ecology. 2015 Mar;96(3):840-9.

PMID:
26236879
16.

Diverse, rare microbial taxa responded to the Deepwater Horizon deep-sea hydrocarbon plume.

Kleindienst S, Grim S, Sogin M, Bracco A, Crespo-Medina M, Joye SB.

ISME J. 2016 Feb;10(2):400-15. doi: 10.1038/ismej.2015.121. Epub 2015 Jul 31.

17.

High rates of anaerobic methane oxidation in freshwater wetlands reduce potential atmospheric methane emissions.

Segarra KE, Schubotz F, Samarkin V, Yoshinaga MY, Hinrichs KU, Joye SB.

Nat Commun. 2015 Jun 30;6:7477. doi: 10.1038/ncomms8477.

PMID:
26123199
18.

Using dispersants after oil spills: impacts on the composition and activity of microbial communities.

Kleindienst S, Paul JH, Joye SB.

Nat Rev Microbiol. 2015 Jun;13(6):388-96. doi: 10.1038/nrmicro3452. Epub 2015 May 6. Review.

PMID:
25944491
19.

A halophilic bacterium inhabiting the warm, CaCl2-rich brine of the perennially ice-covered Lake Vanda, McMurdo Dry Valleys, Antarctica.

Tregoning GS, Kempher ML, Jung DO, Samarkin VA, Joye SB, Madigan MT.

Appl Environ Microbiol. 2015 Mar;81(6):1988-95. doi: 10.1128/AEM.03968-14. Epub 2015 Jan 9.

20.

The metabolic pathways and environmental controls of hydrocarbon biodegradation in marine ecosystems.

Kostka JE, Teske AP, Joye SB, Head IM.

Front Microbiol. 2014 Sep 4;5:471. doi: 10.3389/fmicb.2014.00471. eCollection 2014. No abstract available.

21.

Anaerobic oxidation of methane by sulfate in hypersaline groundwater of the Dead Sea aquifer.

Avrahamov N, Antler G, Yechieli Y, Gavrieli I, Joye SB, Saxton M, Turchyn AV, Sivan O.

Geobiology. 2014 Nov;12(6):511-28. doi: 10.1111/gbi.12095. Epub 2014 Jul 9.

22.

Geomicrobiological linkages between short-chain alkane consumption and sulfate reduction rates in seep sediments.

Bose A, Rogers DR, Adams MM, Joye SB, Girguis PR.

Front Microbiol. 2013 Dec 12;4:386. doi: 10.3389/fmicb.2013.00386. eCollection 2013.

23.

Spatial distribution of nitrogen fixation in methane seep sediment and the role of the ANME archaea.

Dekas AE, Chadwick GL, Bowles MW, Joye SB, Orphan VJ.

Environ Microbiol. 2014 Oct;16(10):3012-29. doi: 10.1111/1462-2920.12247. Epub 2013 Sep 24.

PMID:
24107237
24.

Transcriptional response of bathypelagic marine bacterioplankton to the Deepwater Horizon oil spill.

Rivers AR, Sharma S, Tringe SG, Martin J, Joye SB, Moran MA.

ISME J. 2013 Dec;7(12):2315-29. doi: 10.1038/ismej.2013.129. Epub 2013 Aug 1.

25.

Anaerobic oxidation of short-chain alkanes in hydrothermal sediments: potential influences on sulfur cycling and microbial diversity.

Adams MM, Hoarfrost AL, Bose A, Joye SB, Girguis PR.

Front Microbiol. 2013 May 14;4:110. doi: 10.3389/fmicb.2013.00110. eCollection 2013.

26.

The role of salinity in shaping dissolved inorganic nitrogen and N₂O dynamics in estuarine sediment-water interface.

Teixeira C, Magalhães C, Joye SB, Bordalo AA.

Mar Pollut Bull. 2013 Jan 15;66(1-2):225-9. doi: 10.1016/j.marpolbul.2012.11.004. Epub 2012 Dec 6.

PMID:
23219528
27.

Microbiology: A piece of the methane puzzle.

Joye SB.

Nature. 2012 Nov 22;491(7425):538-9. doi: 10.1038/nature11749. Epub 2012 Nov 7. No abstract available.

PMID:
23135400
28.

Denitrification and environmental factors influencing nitrate removal in Guaymas Basin hydrothermally altered sediments.

Bowles MW, Nigro LM, Teske AP, Joye SB.

Front Microbiol. 2012 Oct 25;3:377. doi: 10.3389/fmicb.2012.00377. eCollection 2012.

29.

Anaerobic methane oxidation in metalliferous hydrothermal sediments: influence on carbon flux and decoupling from sulfate reduction.

Wankel SD, Adams MM, Johnston DT, Hansel CM, Joye SB, Girguis PR.

Environ Microbiol. 2012 Oct;14(10):2726-40. doi: 10.1111/j.1462-2920.2012.02825.x. Epub 2012 Jul 25.

PMID:
22827909
30.

Comment on "A persistent oxygen anomaly reveals the fate of spilled methane in the deep Gulf of Mexico".

Joye SB, Leifer I, MacDonald IR, Chanton JP, Meile CD, Teske AP, Kostka JE, Chistoserdova L, Coffin R, Hollander D, Kastner M, Montoya JP, Rehder G, Solomon E, Treude T, Villareal TA.

Science. 2011 May 27;332(6033):1033; author reply 1033. doi: 10.1126/science.1203307.

31.

Biocomplexity in mangrove ecosystems.

Feller IC, Lovelock CE, Berger U, McKee KL, Joye SB, Ball MC.

Ann Rev Mar Sci. 2010;2:395-417. Review.

PMID:
21141670
32.

Distributions of putative aerobic methanotrophs in diverse pelagic marine environments.

Tavormina PL, Ussler W 3rd, Joye SB, Harrison BK, Orphan VJ.

ISME J. 2010 May;4(5):700-10. doi: 10.1038/ismej.2009.155. Epub 2010 Feb 11. Erratum in: ISME J. 2010 May;4(5):717.

PMID:
20147984
33.

Chemotrophic microbial mats and their potential for preservation in the rock record.

Bailey JV, Orphan VJ, Joye SB, Corsetti FA.

Astrobiology. 2009 Nov;9(9):843-59. doi: 10.1089/ast.2008.0314. Review.

PMID:
19968462
34.

Microbial community response to seawater amendment in low-salinity tidal sediments.

Edmonds JW, Weston NB, Joye SB, Mou X, Moran MA.

Microb Ecol. 2009 Oct;58(3):558-68. doi: 10.1007/s00248-009-9556-2. Epub 2009 Jul 22.

PMID:
19629578
35.

Extensive carbon isotopic heterogeneity among methane seep microbiota.

House CH, Orphan VJ, Turk KA, Thomas B, Pernthaler A, Vrentas JM, Joye SB.

Environ Microbiol. 2009 Sep;11(9):2207-15. doi: 10.1111/j.1462-2920.2009.01934.x. Epub 2009 Jun 7.

PMID:
19508338
36.

Population growth away from the coastal zone: thirty years of land use change and nutrient export in the Altamaha River, GA.

Weston NB, Hollibaugh JT, Joye SB.

Sci Total Environ. 2009 May 1;407(10):3347-56. doi: 10.1016/j.scitotenv.2008.12.066. Epub 2009 Feb 25.

PMID:
19246074
37.

The diverse bacterial community in intertidal, anaerobic sediments at Sapelo Island, Georgia.

Lasher C, Dyszynski G, Everett K, Edmonds J, Ye W, Sheldon W, Wang S, Joye SB, Moran MA, Whitman WB.

Microb Ecol. 2009 Aug;58(2):244-61. doi: 10.1007/s00248-008-9481-9. Epub 2009 Feb 11.

38.

Tracing the slow growth of anaerobic methane-oxidizing communities by (15)N-labelling techniques.

Krüger M, Wolters H, Gehre M, Joye SB, Richnow HH.

FEMS Microbiol Ecol. 2008 Mar;63(3):401-11. doi: 10.1111/j.1574-6941.2007.00431.x.

39.

Variation in prokaryotic community composition as a function of resource availability in tidal creek sediments.

Edmonds JW, Weston NB, Joye SB, Moran MA.

Appl Environ Microbiol. 2008 Mar;74(6):1836-44. doi: 10.1128/AEM.00854-07. Epub 2008 Jan 11.

40.

Anaerobic oxidation of short-chain hydrocarbons by marine sulphate-reducing bacteria.

Kniemeyer O, Musat F, Sievert SM, Knittel K, Wilkes H, Blumenberg M, Michaelis W, Classen A, Bolm C, Joye SB, Widdel F.

Nature. 2007 Oct 18;449(7164):898-901. Epub 2007 Sep 19.

PMID:
17882164
41.

Evidence of giant sulphur bacteria in Neoproterozoic phosphorites.

Bailey JV, Joye SB, Kalanetra KM, Flood BE, Corsetti FA.

Nature. 2007 Jan 11;445(7124):198-201. Epub 2006 Dec 20.

PMID:
17183268
42.

Bacterial taxa that limit sulfur flux from the ocean.

Howard EC, Henriksen JR, Buchan A, Reisch CR, Bürgmann H, Welsh R, Ye W, González JM, Mace K, Joye SB, Kiene RP, Whitman WB, Moran MA.

Science. 2006 Oct 27;314(5799):649-52.

43.

Analysis of fae and fhcD genes in Mono Lake, California.

Nercessian O, Kalyuzhnaya MG, Joye SB, Lidstrom ME, Chistoserdova L.

Appl Environ Microbiol. 2005 Dec;71(12):8949-53.

44.

Temperature-driven decoupling of key phases of organic matter degradation in marine sediments.

Weston NB, Joye SB.

Proc Natl Acad Sci U S A. 2005 Nov 22;102(47):17036-40. Epub 2005 Nov 14.

45.
46.
47.

Novel vacuolate sulfur bacteria from the Gulf of Mexico reproduce by reductive division in three dimensions.

Kalanetra KM, Joye SB, Sunseri NR, Nelson DC.

Environ Microbiol. 2005 Sep;7(9):1451-60.

PMID:
16104867
48.
49.
50.

Analysis of ammonia-oxidizing bacteria from hypersaline Mono Lake, California, on the basis of 16S rRNA sequences.

Ward BB, Martino DP, Diaz MC, Joye SB.

Appl Environ Microbiol. 2000 Jul;66(7):2873-81.

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