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Items: 48

1.

Genomes from bacteria associated with the canine oral cavity: A test case for automated genome-based taxonomic assignment.

Coil DA, Jospin G, Darling AE, Wallis C, Davis IJ, Harris S, Eisen JA, Holcombe LJ, O'Flynn C.

PLoS One. 2019 Jun 10;14(6):e0214354. doi: 10.1371/journal.pone.0214354. eCollection 2019.

2.

Metagenome-assembled genomes provide new insight into the microbial diversity of two thermal pools in Kamchatka, Russia.

Wilkins LGE, Ettinger CL, Jospin G, Eisen JA.

Sci Rep. 2019 Feb 28;9(1):3059. doi: 10.1038/s41598-019-39576-6.

3.

Microbial Community Succession and Nutrient Cycling Responses following Perturbations of Experimental Saltwater Aquaria.

Bik HM, Alexiev A, Aulakh SK, Bharadwaj L, Flanagan J, Haggerty JM, Hird SM, Jospin G, Lang JM, Sauder LA, Neufeld JD, Shaver A, Sethi A, Eisen JA, Coil DA.

mSphere. 2019 Feb 20;4(1). pii: e00043-19. doi: 10.1128/mSphere.00043-19.

4.

Marine probiotics: increasing coral resistance to bleaching through microbiome manipulation.

Rosado PM, Leite DCA, Duarte GAS, Chaloub RM, Jospin G, Nunes da Rocha U, P Saraiva J, Dini-Andreote F, Eisen JA, Bourne DG, Peixoto RS.

ISME J. 2019 Apr;13(4):921-936. doi: 10.1038/s41396-018-0323-6. Epub 2018 Dec 5.

PMID:
30518818
5.

Nitrogen fixation in a landrace of maize is supported by a mucilage-associated diazotrophic microbiota.

Van Deynze A, Zamora P, Delaux PM, Heitmann C, Jayaraman D, Rajasekar S, Graham D, Maeda J, Gibson D, Schwartz KD, Berry AM, Bhatnagar S, Jospin G, Darling A, Jeannotte R, Lopez J, Weimer BC, Eisen JA, Shapiro HY, Ané JM, Bennett AB.

PLoS Biol. 2018 Aug 7;16(8):e2006352. doi: 10.1371/journal.pbio.2006352. eCollection 2018 Aug.

6.

Transcriptome analysis in whole blood reveals increased microbial diversity in schizophrenia.

Olde Loohuis LM, Mangul S, Ori APS, Jospin G, Koslicki D, Yang HT, Wu T, Boks MP, Lomen-Hoerth C, Wiedau-Pazos M, Cantor RM, de Vos WM, Kahn RS, Eskin E, Ophoff RA.

Transl Psychiatry. 2018 May 10;8(1):96. doi: 10.1038/s41398-018-0107-9.

7.

Complete Genome Sequence of Dolosigranulum pigrum from a Patient with Interstitial Lung Disease Using Single-Molecule Real-Time Sequencing Technology.

Mukhopadhyay R, Joaquin J, Hogue R, Fitzgerald S, Jospin G, Mars K, Eisen JA, Chaturvedi V.

Genome Announc. 2017 May 4;5(18). pii: e00317-17. doi: 10.1128/genomeA.00317-17.

8.

Complete Genome Sequence of a Paenalcaligenes hominis Strain Isolated from a Paraplegic Patient with Neurogenic Bladder Using Single-Molecule Real-Time Sequencing Technology.

Mukhopadhyay R, Joaquin J, Hogue R, Kilaru A, Jospin G, Mars K, Eisen JA, Chaturvedi V.

Genome Announc. 2017 Apr 27;5(17). pii: e00252-17. doi: 10.1128/genomeA.00252-17.

9.

Genomic attributes of extended-spectrum β-lactamase-producing Escherichia coli isolated from patients in Lebanon.

Tokajian S, Salloum T, Eisen JA, Jospin G, Farra A, Mokhbat JE, Coil DA.

Future Microbiol. 2017 Mar;12:213-226. doi: 10.2217/fmb-2017-0171. Epub 2017 Feb 27.

PMID:
28262042
10.

Draft Genome Sequences of Dermacoccus nishinomiyaensis Strains UCD-KPL2534 and UCD-KPL2528 Isolated from an Indoor Track Facility.

Klein BA, Lemon KP, Gajare P, Jospin G, Eisen JA, Coil DA.

Genome Announc. 2017 Feb 23;5(8). pii: e01652-16. doi: 10.1128/genomeA.01652-16.

12.

Recent Outbreaks of Shigellosis in California Caused by Two Distinct Populations of Shigella sonnei with either Increased Virulence or Fluoroquinolone Resistance.

Kozyreva VK, Jospin G, Greninger AL, Watt JP, Eisen JA, Chaturvedi V.

mSphere. 2016 Dec 21;1(6). pii: e00344-16. doi: 10.1128/mSphere.00344-16. eCollection 2016 Nov-Dec.

13.

Genome Analysis of Streptococcus pyogenes Associated with Pharyngitis and Skin Infections.

Ibrahim J, Eisen JA, Jospin G, Coil DA, Khazen G, Tokajian S.

PLoS One. 2016 Dec 15;11(12):e0168177. doi: 10.1371/journal.pone.0168177. eCollection 2016.

14.

Draft Genome Sequence of Curtobacterium sp. Strain UCD-KPL2560 (Phylum Actinobacteria).

Klein BA, Lemon KP, Faller LL, Jospin G, Eisen JA, Coil DA.

Genome Announc. 2016 Oct 6;4(5). pii: e01040-16. doi: 10.1128/genomeA.01040-16.

15.

Draft Genome Sequences of Shewanella sp. Strain UCD-FRSP16_17 and Nine Vibrio Strains Isolated from Abalone Feces.

Vater A, Agbonavbare V, Carlin DA, Carruthers GM, Chac A, Doroud L, Farris SJ, Gudzeva M, Jospin G, Kintner JA, Knauss JP, Lor Y, Pechacek R, Rohner ES, Simmons SM, Verescshagina M, Wirawan CS, Zagal L, Coil DA.

Genome Announc. 2016 Sep 15;4(5). pii: e00977-16. doi: 10.1128/genomeA.00977-16.

16.

Draft Genome Sequence of Klebsiella pneumoniae UCD-JA29 Isolated from a Patient with Sepsis.

Alexiev A, Coil DA, Jospin G, Eisen JA, Adams JY.

Genome Announc. 2016 May 5;4(3). pii: e00234-16. doi: 10.1128/genomeA.00234-16.

17.

Draft Genome Sequences of Two Pseudoalteromonas porphyrae Strains Isolated from Seagrass Sediment.

Lee RD, Jospin G, Lang JM, Eisen JA, Coil DA.

Genome Announc. 2016 Mar 17;4(2). pii: e00092-16. doi: 10.1128/genomeA.00092-16.

18.

Draft Genome Sequence of Cobetia sp. UCD-24C, Isolated from Roots and Leaves of the Seagrass Zostera marina.

Alexiev A, Krusor ML, Jospin G, Lang JM, Eisen JA, Coil DA.

Genome Announc. 2016 Mar 10;4(2). pii: e00116-16. doi: 10.1128/genomeA.00116-16.

19.

Draft Genome Sequences of Two Vibrio splendidus Strains, Isolated from Seagrass Sediment.

Lee RD, Jospin G, Lang JM, Eisen JA, Coil DA.

Genome Announc. 2016 Feb 18;4(1). pii: e01769-15. doi: 10.1128/genomeA.01769-15.

20.

Draft Genome Sequences of Two Pseudoalteromonas Strains Isolated from Roots and Leaf Blades of the Seagrass Zostera marina.

Alexiev A, Krusor ML, Jospin G, Lang JM, Eisen JA, Coil DA.

Genome Announc. 2016 Feb 18;4(1). pii: e00010-16. doi: 10.1128/genomeA.00010-16.

21.

Draft Genome Sequences of Acinetobacter baumannii Strains Harboring the blaNDM-1 Gene Isolated in Lebanon from Civilians Wounded during the Syrian Civil War.

Tokajian S, Eisen JA, Jospin G, Hamze M, Rafei R, Salloum T, Ibrahim J, Coil DA.

Genome Announc. 2016 Jan 28;4(1). pii: e01678-15. doi: 10.1128/genomeA.01678-15.

22.

Draft Genome Sequence of Klebsiella pneumoniae KGM-IMP216 Harboring blaCTX-M-15, blaDHA-1, blaTEM-1B, blaNDM-1, blaSHV-28, and blaOXA-1, Isolated from a Patient in Lebanon.

Tokajian S, Eisen JA, Jospin G, Matar G, Araj GF, Coil DA.

Genome Announc. 2016 Jan 28;4(1). pii: e01632-15. doi: 10.1128/genomeA.01632-15.

23.

Additional Draft Genome Sequences of Escherichia coli Strains Isolated from Septic Patients.

Coil DA, Jospin G, Eisen JA, Adams JY.

Genome Announc. 2016 Jan 21;4(1). pii: e01614-15. doi: 10.1128/genomeA.01614-15.

24.

Draft Genome Sequence of Bacillus vietnamensis Strain UCD-SED5 (Phylum Firmicutes).

Lee RD, Jospin G, Lang JM, Eisen JA, Coil DA.

Genome Announc. 2015 Nov 19;3(6). pii: e01376-15. doi: 10.1128/genomeA.01376-15.

25.

Draft Genome Sequence of Pseudoalteromonas tetraodonis Strain UCD-SED8 (Phylum Gammaproteobacteria).

Lee RD, Jospin G, Lang JM, Eisen JA, Coil DA.

Genome Announc. 2015 Nov 5;3(6). pii: e01276-15. doi: 10.1128/genomeA.01276-15.

26.

Draft Genome Sequence of Planomicrobium glaciei UCD-HAM (Phylum Firmicutes).

Betts MN, Jospin G, Eisen JA, Coil DA.

Genome Announc. 2015 Oct 15;3(5). pii: e01209-15. doi: 10.1128/genomeA.01209-15.

27.

Swabs to genomes: a comprehensive workflow.

Dunitz MI, Lang JM, Jospin G, Darling AE, Eisen JA, Coil DA.

PeerJ. 2015 May 14;3:e960. doi: 10.7717/peerj.960. eCollection 2015.

28.

Whole genome sequencing of extended-spectrum β-lactamase producing Klebsiella pneumoniae isolated from a patient in Lebanon.

Tokajian S, Eisen JA, Jospin G, Farra A, Coil DA.

Front Cell Infect Microbiol. 2015 Apr 8;5:32. doi: 10.3389/fcimb.2015.00032. eCollection 2015.

29.

Draft genome sequences of 26 porphyromonas strains isolated from the canine oral microbiome.

Coil DA, Alexiev A, Wallis C, O'Flynn C, Deusch O, Davis I, Horsfall A, Kirkwood N, Jospin G, Eisen JA, Harris S, Darling AE.

Genome Announc. 2015 Apr 9;3(2). pii: e00187-15. doi: 10.1128/genomeA.00187-15.

30.

Draft Genome Sequences of Escherichia coli Strains Isolated from Septic Patients.

Dunitz MI, Coil DA, Jospin G, Eisen JA, Adams JY.

Genome Announc. 2014 Dec 18;2(6). pii: e01278-14. doi: 10.1128/genomeA.01278-14.

31.

A5-miseq: an updated pipeline to assemble microbial genomes from Illumina MiSeq data.

Coil D, Jospin G, Darling AE.

Bioinformatics. 2015 Feb 15;31(4):587-9. doi: 10.1093/bioinformatics/btu661. Epub 2014 Oct 22.

PMID:
25338718
32.

The bacterial communities of Drosophila suzukii collected from undamaged cherries.

Chandler JA, James PM, Jospin G, Lang JM.

PeerJ. 2014 Jul 22;2:e474. doi: 10.7717/peerj.474. eCollection 2014.

33.

Draft Genome Sequence of the Endosymbiont "Candidatus Ruthia magnifica" UCD-CM (Phylum Proteobacteria).

Lee RD, Jospin G, Coil DA, Eisen JA.

Genome Announc. 2014 Jul 17;2(4). pii: e00717-14. doi: 10.1128/genomeA.00717-14.

34.

Draft Genome Sequences of Streptococcus pyogenes Strains Associated with Throat and Skin Infections in Lebanon.

Tokajian S, Eisen JA, Jospin G, Coil DA.

Genome Announc. 2014 May 15;2(3). pii: e00358-14. doi: 10.1128/genomeA.00358-14.

35.

Draft Genome Sequence of Tatumella sp. Strain UCD-D_suzukii (Phylum Proteobacteria) Isolated from Drosophila suzukii Larvae.

Dunitz MI, James PM, Jospin G, Eisen JA, Coil DA, Chandler JA.

Genome Announc. 2014 Apr 24;2(2). pii: e00349-14. doi: 10.1128/genomeA.00349-14.

36.

Draft Genome Sequences of Extended-Spectrum β-Lactamase-Producing Escherichia coli Strains Isolated from Patients in Lebanon.

Tokajian S, Eisen JA, Jospin G, Farra A, Coil DA.

Genome Announc. 2014 Feb 20;2(1). pii: e00123-14. doi: 10.1128/genomeA.00123-14.

37.

Draft Genome Sequence of Extended-Spectrum β-Lactamase-Producing Klebsiella pneumoniae Isolated from a Patient in Lebanon.

Tokajian S, Eisen JA, Jospin G, Farra A, Coil DA.

Genome Announc. 2014 Feb 20;2(1). pii: e00121-14. doi: 10.1128/genomeA.00121-14.

38.

PhyloSift: phylogenetic analysis of genomes and metagenomes.

Darling AE, Jospin G, Lowe E, Matsen FA 4th, Bik HM, Eisen JA.

PeerJ. 2014 Jan 9;2:e243. doi: 10.7717/peerj.243. eCollection 2014.

39.
40.

Global marine bacterial diversity peaks at high latitudes in winter.

Ladau J, Sharpton TJ, Finucane MM, Jospin G, Kembel SW, O'Dwyer J, Koeppel AF, Green JL, Pollard KS.

ISME J. 2013 Sep;7(9):1669-77. doi: 10.1038/ismej.2013.37. Epub 2013 Mar 21. Erratum in: ISME J.2013 Sep;7(9)1876.

41.

Sifting through genomes with iterative-sequence clustering produces a large, phylogenetically diverse protein-family resource.

Sharpton TJ, Jospin G, Wu D, Langille MG, Pollard KS, Eisen JA.

BMC Bioinformatics. 2012 Oct 13;13:264. doi: 10.1186/1471-2105-13-264.

42.

[Tuberculosis and diffuse unilateral pulmonary transradiancy with hypovascularization].

Jospin G, Pernod J, Souquet R, Lassure P, Odent P, Campan L.

Poumon Coeur. 1969;25(6):541-55. French. No abstract available.

PMID:
5408136
43.

[A case of double primary cavernous bronchial carcinoma unilaterally located].

Jospin G, Holy H, Raton D, Lassure P, Odent P.

Mars Med. 1969;106(11):938-45. French. No abstract available.

PMID:
5407174
44.

[Hamartochondroma of the pulmonary pedicle].

Jospin G, Tobé F, Gallouedec C, Brocard H.

J Fr Med Chir Thorac. 1968 Jul-Aug;22(5):509-20. French. No abstract available.

PMID:
5757901
45.

[Apropos of an unusual form of bronchial cancer].

Crinquette J, Jospin G, Masson C.

J Sci Med Lille. 1967 Apr;85(4):203-12. French. No abstract available.

PMID:
5619095
46.

[Atypical clinical forms of Trichomonas vaginitis].

COURTY L, GAUDEFROY M, JOSPIN G.

Brux Med. 1954 Jan 24;34(4):135-8. Undetermined Language. No abstract available.

PMID:
13140881
47.

[Atypical clinical forms of trichomonas vaginitis].

COURTY L, GAUDEFROY M, JOSPIN G.

J Sci Med Lille. 1953 Apr;71(4):174-83. Undetermined Language. No abstract available.

PMID:
13085454
48.

[Atypical clinical forms of vaginitis from Trichomonas].

COURTY L, GAUDEFROY M, JOSPIN G.

Bull Fed Soc Gynecol Obstet Lang Fr. 1952;4(5):881-4. Undetermined Language. No abstract available.

PMID:
13042388

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