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Items: 18

1.

Gene regulatory networks STARR-ing B cells.

Martínez de Paz A, Josefowicz SZ.

Nat Immunol. 2019 Dec 23. doi: 10.1038/s41590-019-0566-z. [Epub ahead of print] No abstract available.

PMID:
31873293
2.

Greater Than the Sum of Parts: Complexity of the Dynamic Epigenome.

Soshnev AA, Josefowicz SZ, Allis CD.

Mol Cell. 2018 Feb 1;69(3):533. doi: 10.1016/j.molcel.2018.01.015. No abstract available.

3.

Chromatin Kinases Act on Transcription Factors and Histone Tails in Regulation of Inducible Transcription.

Josefowicz SZ, Shimada M, Armache A, Li CH, Miller RM, Lin S, Yang A, Dill BD, Molina H, Park HS, Garcia BA, Taunton J, Roeder RG, Allis CD.

Mol Cell. 2016 Oct 20;64(2):347-361. doi: 10.1016/j.molcel.2016.09.026.

4.

Greater Than the Sum of Parts: Complexity of the Dynamic Epigenome.

Soshnev AA, Josefowicz SZ, Allis CD.

Mol Cell. 2016 Jun 2;62(5):681-94. doi: 10.1016/j.molcel.2016.05.004. Review. Erratum in: Mol Cell. 2018 Feb 1;69(3):533.

5.

An Interactive Database for the Assessment of Histone Antibody Specificity.

Rothbart SB, Dickson BM, Raab JR, Grzybowski AT, Krajewski K, Guo AH, Shanle EK, Josefowicz SZ, Fuchs SM, Allis CD, Magnuson TR, Ruthenburg AJ, Strahl BD.

Mol Cell. 2015 Aug 6;59(3):502-11. doi: 10.1016/j.molcel.2015.06.022. Epub 2015 Jul 23.

6.

Mouse regulatory DNA landscapes reveal global principles of cis-regulatory evolution.

Vierstra J, Rynes E, Sandstrom R, Zhang M, Canfield T, Hansen RS, Stehling-Sun S, Sabo PJ, Byron R, Humbert R, Thurman RE, Johnson AK, Vong S, Lee K, Bates D, Neri F, Diegel M, Giste E, Haugen E, Dunn D, Wilken MS, Josefowicz S, Samstein R, Chang KH, Eichler EE, De Bruijn M, Reh TA, Skoultchi A, Rudensky A, Orkin SH, Papayannopoulou T, Treuting PM, Selleri L, Kaul R, Groudine M, Bender MA, Stamatoyannopoulos JA.

Science. 2014 Nov 21;346(6212):1007-12. doi: 10.1126/science.1246426.

7.

A comparative encyclopedia of DNA elements in the mouse genome.

Yue F, Cheng Y, Breschi A, Vierstra J, Wu W, Ryba T, Sandstrom R, Ma Z, Davis C, Pope BD, Shen Y, Pervouchine DD, Djebali S, Thurman RE, Kaul R, Rynes E, Kirilusha A, Marinov GK, Williams BA, Trout D, Amrhein H, Fisher-Aylor K, Antoshechkin I, DeSalvo G, See LH, Fastuca M, Drenkow J, Zaleski C, Dobin A, Prieto P, Lagarde J, Bussotti G, Tanzer A, Denas O, Li K, Bender MA, Zhang M, Byron R, Groudine MT, McCleary D, Pham L, Ye Z, Kuan S, Edsall L, Wu YC, Rasmussen MD, Bansal MS, Kellis M, Keller CA, Morrissey CS, Mishra T, Jain D, Dogan N, Harris RS, Cayting P, Kawli T, Boyle AP, Euskirchen G, Kundaje A, Lin S, Lin Y, Jansen C, Malladi VS, Cline MS, Erickson DT, Kirkup VM, Learned K, Sloan CA, Rosenbloom KR, Lacerda de Sousa B, Beal K, Pignatelli M, Flicek P, Lian J, Kahveci T, Lee D, Kent WJ, Ramalho Santos M, Herrero J, Notredame C, Johnson A, Vong S, Lee K, Bates D, Neri F, Diegel M, Canfield T, Sabo PJ, Wilken MS, Reh TA, Giste E, Shafer A, Kutyavin T, Haugen E, Dunn D, Reynolds AP, Neph S, Humbert R, Hansen RS, De Bruijn M, Selleri L, Rudensky A, Josefowicz S, Samstein R, Eichler EE, Orkin SH, Levasseur D, Papayannopoulou T, Chang KH, Skoultchi A, Gosh S, Disteche C, Treuting P, Wang Y, Weiss MJ, Blobel GA, Cao X, Zhong S, Wang T, Good PJ, Lowdon RF, Adams LB, Zhou XQ, Pazin MJ, Feingold EA, Wold B, Taylor J, Mortazavi A, Weissman SM, Stamatoyannopoulos JA, Snyder MP, Guigo R, Gingeras TR, Gilbert DM, Hardison RC, Beer MA, Ren B; Mouse ENCODE Consortium.

Nature. 2014 Nov 20;515(7527):355-64. doi: 10.1038/nature13992.

8.

Regulators of chromatin state and transcription in CD4 T-cell polarization.

Josefowicz SZ.

Immunology. 2013 Jul;139(3):299-308. doi: 10.1111/imm.12115. Review.

9.

Foxp3 exploits a pre-existent enhancer landscape for regulatory T cell lineage specification.

Samstein RM, Arvey A, Josefowicz SZ, Peng X, Reynolds A, Sandstrom R, Neph S, Sabo P, Kim JM, Liao W, Li MO, Leslie C, Stamatoyannopoulos JA, Rudensky AY.

Cell. 2012 Sep 28;151(1):153-66. doi: 10.1016/j.cell.2012.06.053.

10.

Extrathymic generation of regulatory T cells in placental mammals mitigates maternal-fetal conflict.

Samstein RM, Josefowicz SZ, Arvey A, Treuting PM, Rudensky AY.

Cell. 2012 Jul 6;150(1):29-38. doi: 10.1016/j.cell.2012.05.031.

11.

Extrathymically generated regulatory T cells control mucosal TH2 inflammation.

Josefowicz SZ, Niec RE, Kim HY, Treuting P, Chinen T, Zheng Y, Umetsu DT, Rudensky AY.

Nature. 2012 Feb 8;482(7385):395-9. doi: 10.1038/nature10772.

12.

Regulatory T cells: mechanisms of differentiation and function.

Josefowicz SZ, Lu LF, Rudensky AY.

Annu Rev Immunol. 2012;30:531-64. doi: 10.1146/annurev.immunol.25.022106.141623. Epub 2012 Jan 6. Review.

13.

Stability of the regulatory T cell lineage in vivo.

Rubtsov YP, Niec RE, Josefowicz S, Li L, Darce J, Mathis D, Benoist C, Rudensky AY.

Science. 2010 Sep 24;329(5999):1667-71. doi: 10.1126/science.1191996.

14.

Role of conserved non-coding DNA elements in the Foxp3 gene in regulatory T-cell fate.

Zheng Y, Josefowicz S, Chaudhry A, Peng XP, Forbush K, Rudensky AY.

Nature. 2010 Feb 11;463(7282):808-12. doi: 10.1038/nature08750. Epub 2010 Jan 13.

15.

Control of regulatory T cell lineage commitment and maintenance.

Josefowicz SZ, Rudensky A.

Immunity. 2009 May;30(5):616-25. doi: 10.1016/j.immuni.2009.04.009. Review.

16.

Cutting edge: TCR stimulation is sufficient for induction of Foxp3 expression in the absence of DNA methyltransferase 1.

Josefowicz SZ, Wilson CB, Rudensky AY.

J Immunol. 2009 Jun 1;182(11):6648-52. doi: 10.4049/jimmunol.0803320.

17.

Genome-wide analysis of Foxp3 target genes in developing and mature regulatory T cells.

Zheng Y, Josefowicz SZ, Kas A, Chu TT, Gavin MA, Rudensky AY.

Nature. 2007 Feb 22;445(7130):936-40. Epub 2007 Jan 21.

PMID:
17237761
18.

CMV antigen-specific CD4+ and CD8+ T cell IFNgamma expression and proliferation responses in healthy CMV-seropositive individuals.

Sinclair E, Black D, Epling CL, Carvidi A, Josefowicz SZ, Bredt BM, Jacobson MA.

Viral Immunol. 2004;17(3):445-54.

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