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Visualization-assisted binning of metagenome assemblies reveals potential new pathogenic profiles in idiopathic travelers' diarrhea.

Zhu Q, Dupont CL, Jones MB, Pham KM, Jiang ZD, DuPont HL, Highlander SK.

Microbiome. 2018 Nov 8;6(1):201. doi: 10.1186/s40168-018-0579-0.


Genetic Analysis of 400 Patients Refines Understanding and Implicates a New Gene in Atypical Hemolytic Uremic Syndrome.

Bu F, Zhang Y, Wang K, Borsa NG, Jones MB, Taylor AO, Takanami E, Meyer NC, Frees K, Thomas CP, Nester C, Smith RJH.

J Am Soc Nephrol. 2018 Oct 30. pii: ASN.2018070759. doi: 10.1681/ASN.2018070759. [Epub ahead of print]


Identification of the anabolic steroid 6β-chlorotestosterone in a dietary supplement.

Falconer TM, Flurer RA, Jones MB, Lorenz LM, Voelker SE.

Drug Test Anal. 2018 Sep 20. doi: 10.1002/dta.2510. [Epub ahead of print]


Hypoplastic left heart syndrome: from fetus to fontan.

Roeleveld PP, Axelrod DM, Klugman D, Jones MB, Chanani NK, Rossano JW, Costello JM.

Cardiol Young. 2018 Nov;28(11):1275-1288. doi: 10.1017/S104795111800135X. Epub 2018 Sep 18.


Plasma glycomics predict cardiovascular disease in patients with ART-controlled HIV infections.

Oswald DM, Sim ES, Baker C, Farhan O, Debanne SM, Morris NJ, Rodriguez BG, Jones MB, Cobb BA.

FASEB J. 2018 Sep 5:fj201800923R. doi: 10.1096/fj.201800923R. [Epub ahead of print]


Cytokinin Signaling in Mycobacterium tuberculosis.

Samanovic MI, Hsu HC, Jones MB, Jones V, McNeil MR, Becker SH, Jordan AT, Strnad M, Xu C, Jackson M, Li H, Darwin KH.

MBio. 2018 Jun 19;9(3). pii: e00989-18. doi: 10.1128/mBio.00989-18.


IgG and leukocytes: Targets of immunomodulatory α2,6 sialic acids.

Jones MB.

Cell Immunol. 2018 Mar 31. pii: S0008-8749(18)30148-5. doi: 10.1016/j.cellimm.2018.03.014. [Epub ahead of print]


Oral vitamin D3 supplementation for chronic plaque psoriasis: a randomized, double-blind, placebo-controlled trial.

Ingram MA, Jones MB, Stonehouse W, Jarrett P, Scragg R, Mugridge O, von Hurst PR.

J Dermatolog Treat. 2018 Nov;29(7):648-657. doi: 10.1080/09546634.2018.1444728. Epub 2018 Mar 22.


The Fontan Procedure for Single-Ventricle Physiology.

Jones MB.

Crit Care Nurse. 2018 Feb;38(1):e1-e10. doi: 10.4037/ccn2018994.


Effects of contaminants of emerging concern on Myzus persicae (Sulzer, Hemiptera: Aphididae) biology and on their host plant, Capsicum annuum.

Pennington MJ, Rothman JA, Jones MB, McFrederick QS, Gan J, Trumble JT.

Environ Monit Assess. 2018 Feb 8;190(3):125. doi: 10.1007/s10661-018-6503-z.


Critical review of the impacts of grazing intensity on soil organic carbon storage and other soil quality indicators in extensively managed grasslands.

Abdalla M, Hastings A, Chadwick DR, Jones DL, Evans CD, Jones MB, Rees RM, Smith P.

Agric Ecosyst Environ. 2018 Feb 1;253:62-81. doi: 10.1016/j.agee.2017.10.023. Review.


Temporal heterogeneity increases with spatial heterogeneity in ecological communities.

Collins SL, Avolio ML, Gries C, Hallett LM, Koerner SE, La Pierre KJ, Rypel AL, Sokol ER, Fey SB, Flynn DFB, Jones SK, Ladwig LM, Ripplinger J, Jones MB.

Ecology. 2018 Apr;99(4):858-865. doi: 10.1002/ecy.2154. Epub 2018 Feb 15.


Genetic risk, dysbiosis, and treatment stratification using host genome and gut microbiome in inflammatory bowel disease.

Moustafa A, Li W, Anderson EL, Wong EHM, Dulai PS, Sandborn WJ, Biggs W, Yooseph S, Jones MB, Venter JC, Nelson KE, Chang JT, Telenti A, Boland BS.

Clin Transl Gastroenterol. 2018 Jan 18;9(1):e132. doi: 10.1038/ctg.2017.58.


Content analysis of homeless smokers' perspectives on established and alternative smoking interventions.

Collins SE, Orfaly VE, Wu T, Chang S, Hardy RV, Nash A, Jones MB, Mares L, Taylor EM, Nelson LA, Clifasefi SL.

Int J Drug Policy. 2018 Jan;51:10-17. doi: 10.1016/j.drugpo.2017.09.007. Epub 2017 Nov 13.


Polysaccharide-experienced effector T cells induce IL-10 in FoxP3+ regulatory T cells to prevent pulmonary inflammation.

Johnson JL, Jones MB, Cobb BA.

Glycobiology. 2018 Dec 1;28(1):50-58. doi: 10.1093/glycob/cwx093.


Contaminants of emerging concern affect Trichoplusia ni growth and development on artificial diets and a key host plant.

Pennington MJ, Rothman JA, Dudley SL, Jones MB, McFrederick QS, Gan J, Trumble JT.

Proc Natl Acad Sci U S A. 2017 Nov 14;114(46):E9923-E9931. doi: 10.1073/pnas.1713385114. Epub 2017 Oct 30.


Host Genetic Control of the Oral Microbiome in Health and Disease.

Gomez A, Espinoza JL, Harkins DM, Leong P, Saffery R, Bockmann M, Torralba M, Kuelbs C, Kodukula R, Inman J, Hughes T, Craig JM, Highlander SK, Jones MB, Dupont CL, Nelson KE.

Cell Host Microbe. 2017 Sep 13;22(3):269-278.e3. doi: 10.1016/j.chom.2017.08.013.


Effects of contaminants of emerging concern on Megaselia scalaris (Lowe, Diptera: Phoridae) and its microbial community.

Pennington MJ, Rothman JA, Jones MB, McFrederick QS, Gan J, Trumble JT.

Sci Rep. 2017 Aug 15;7(1):8165. doi: 10.1038/s41598-017-08683-7.


T cell-intrinsic TLR2 stimulation promotes IL-10 expression and suppressive activity by CD45RbHi T cells.

Jun JC, Jones MB, Oswald DM, Sim ES, Jonnalagadda AR, Kreisman LSC, Cobb BA.

PLoS One. 2017 Jul 25;12(7):e0180688. doi: 10.1371/journal.pone.0180688. eCollection 2017.


Physical Health Outcomes in Preschoolers with Prior Authorization for Antipsychotics.

Wei YJ, Liu X, Rao N, McPherson M, Jones MB, Bussing R, Winterstein AG.

J Child Adolesc Psychopharmacol. 2017 Nov;27(9):833-839. doi: 10.1089/cap.2017.0006. Epub 2017 Jul 14.


A randomized phase II trial of ridaforolimus, dalotuzumab, and exemestane compared with ridaforolimus and exemestane in patients with advanced breast cancer.

Rugo HS, Trédan O, Ro J, Morales SM, Campone M, Musolino A, Afonso N, Ferreira M, Park KH, Cortes J, Tan AR, Blum JL, Eaton L, Gause CK, Wang Z, Im E, Mauro DJ, Jones MB, Denker A, Baselga J.

Breast Cancer Res Treat. 2017 Oct;165(3):601-609. doi: 10.1007/s10549-017-4375-5. Epub 2017 Jul 5.


Skills and Knowledge for Data-Intensive Environmental Research.

Hampton SE, Jones MB, Wasser LA, Schildhauer MP, Supp SR, Brun J, Hernandez RR, Boettiger C, Collins SL, Gross LJ, Fernández DS, Budden A, White EP, Teal TK, Labou SG, Aukema JE.

Bioscience. 2017 Jun 1;67(6):546-557. doi: 10.1093/biosci/bix025. Epub 2017 May 3.


Gut Microbiome-Based Metagenomic Signature for Non-invasive Detection of Advanced Fibrosis in Human Nonalcoholic Fatty Liver Disease.

Loomba R, Seguritan V, Li W, Long T, Klitgord N, Bhatt A, Dulai PS, Caussy C, Bettencourt R, Highlander SK, Jones MB, Sirlin CB, Schnabl B, Brinkac L, Schork N, Chen CH, Brenner DA, Biggs W, Yooseph S, Venter JC, Nelson KE.

Cell Metab. 2017 May 2;25(5):1054-1062.e5. doi: 10.1016/j.cmet.2017.04.001.


A phase II study of combined ridaforolimus and dalotuzumab compared with exemestane in patients with estrogen receptor-positive breast cancer.

Baselga J, Morales SM, Awada A, Blum JL, Tan AR, Ewertz M, Cortes J, Moy B, Ruddy KJ, Haddad T, Ciruelos EM, Vuylsteke P, Ebbinghaus S, Im E, Eaton L, Pathiraja K, Gause C, Mauro D, Jones MB, Rugo HS.

Breast Cancer Res Treat. 2017 Jun;163(3):535-544. doi: 10.1007/s10549-017-4199-3. Epub 2017 Mar 21.


Disparities in the surgical staging of high-grade endometrial cancer in the United States.

Foote JR, Gaillard S, Broadwater G, Sosa JA, Davidson B, Adam MA, Secord AA, Jones MB, Chino J, Havrilesky LJ.

Gynecol Oncol Res Pract. 2017 Jan 19;4:1. doi: 10.1186/s40661-016-0036-3. eCollection 2017.


Polygenic Control of Carotid Atherosclerosis in a BALB/cJ × SM/J Intercross and a Combined Cross Involving Multiple Mouse Strains.

Grainger AT, Jones MB, Chen MH, Shi W.

G3 (Bethesda). 2017 Feb 9;7(2):731-739. doi: 10.1534/g3.116.037879.


Data on genetic analysis of atherosclerosis identifies a major susceptibility locus in the major histocompatibility complex of mice.

Grainger AT, Jones MB, Li J, Chen MH, Manichaikul A, Shi W.

Data Brief. 2016 Nov 19;9:1067-1069. eCollection 2016 Dec.


Transmission of viruses via our microbiomes.

Ly M, Jones MB, Abeles SR, Santiago-Rodriguez TM, Gao J, Chan IC, Ghose C, Pride DT.

Microbiome. 2016 Dec 2;4(1):64.


Reducing the Bottleneck in Discovery of Novel Antibiotics.

Jones MB, Nierman WC, Shan Y, Frank BC, Spoering A, Ling L, Peoples A, Zullo A, Lewis K, Nelson KE.

Microb Ecol. 2017 Apr;73(3):658-667. doi: 10.1007/s00248-016-0889-3. Epub 2016 Nov 28.


Acquired von Willebrand Syndrome: An Under-Recognized Cause of Major Bleeding in the Cardiac Intensive Care Unit.

Jones MB, Ramakrishnan K, Alfares FA, Endicott KM, Oldenburg G, Berger JT, Shankar V, Nath DS, Diab YA.

World J Pediatr Congenit Heart Surg. 2016 Nov;7(6):711-716.


Injuries and home advantage in the NFL.

Jones MB.

Springerplus. 2016 Oct 6;5(1):1734. eCollection 2016.


The relationship between 25-hydroxyvitamin D concentration in early pregnancy and pregnancy outcomes in a large, prospective cohort.

Boyle VT, Thorstensen EB, Mourath D, Jones MB, McCowan LM, Kenny LC, Baker PN.

Br J Nutr. 2016 Oct;116(8):1409-1415. Epub 2016 Oct 18.


Genetic analysis of atherosclerosis identifies a major susceptibility locus in the major histocompatibility complex of mice.

Grainger AT, Jones MB, Li J, Chen MH, Manichaikul A, Shi W.

Atherosclerosis. 2016 Nov;254:124-132. doi: 10.1016/j.atherosclerosis.2016.10.011. Epub 2016 Oct 6.


A robust ambient temperature collection and stabilization strategy: Enabling worldwide functional studies of the human microbiome.

Anderson EL, Li W, Klitgord N, Highlander SK, Dayrit M, Seguritan V, Yooseph S, Biggs W, Venter JC, Nelson KE, Jones MB.

Sci Rep. 2016 Aug 25;6:31731. doi: 10.1038/srep31731.


A phase I trial of the human double minute 2 inhibitor (MK-8242) in patients with refractory/recurrent acute myelogenous leukemia (AML).

Ravandi F, Gojo I, Patnaik MM, Minden MD, Kantarjian H, Johnson-Levonas AO, Fancourt C, Lam R, Jones MB, Knox CD, Rose S, Patel PS, Tibes R.

Leuk Res. 2016 Sep;48:92-100. doi: 10.1016/j.leukres.2016.07.004. Epub 2016 Jul 25.


Transcriptomic evidence for modulation of host inflammatory responses during febrile Plasmodium falciparum malaria.

Tran TM, Jones MB, Ongoiba A, Bijker EM, Schats R, Venepally P, Skinner J, Doumbo S, Quinten E, Visser LG, Whalen E, Presnell S, O'Connell EM, Kayentao K, Doumbo OK, Chaussabel D, Lorenzi H, Nutman TB, Ottenhoff TH, Haks MC, Traore B, Kirkness EF, Sauerwein RW, Crompton PD.

Sci Rep. 2016 Aug 10;6:31291. doi: 10.1038/srep31291.


Interactions between mitochondrial and nuclear DNA in mammalian cells are non-random.

Doynova MD, Berretta A, Jones MB, Jasoni CL, Vickers MH, O'Sullivan JM.

Mitochondrion. 2016 Sep;30:187-96. doi: 10.1016/j.mito.2016.08.003. Epub 2016 Aug 5.


Nursing Considerations in Pediatric Cardiac Critical Care.

Jones MB, Tucker D.

Pediatr Crit Care Med. 2016 Aug;17(8 Suppl 1):S383-7. doi: 10.1097/PCC.0000000000000856. Review.


Microbial diversity in individuals and their household contacts following typical antibiotic courses.

Abeles SR, Jones MB, Santiago-Rodriguez TM, Ly M, Klitgord N, Yooseph S, Nelson KE, Pride DT.

Microbiome. 2016 Jul 30;4(1):39. doi: 10.1186/s40168-016-0187-9.


B-cell-independent sialylation of IgG.

Jones MB, Oswald DM, Joshi S, Whiteheart SW, Orlando R, Cobb BA.

Proc Natl Acad Sci U S A. 2016 Jun 28;113(26):7207-12. doi: 10.1073/pnas.1523968113. Epub 2016 Jun 14.


Perceptions of Bedside Cardiac Critical Care Registered Nurses on 24 Hour Attending Intensivist Coverage.

Alfares FA, Jones MB, Ramakrishnan K, Endicott KM, Zurakowski D, Shankar V, Nath DS.

Congenit Heart Dis. 2016 Jul;11(4):354-8. doi: 10.1111/chd.12381. Epub 2016 Jun 6.


Hybrid Exclusion of HeartMate ІІ Left Ventricular Assist Device After Bridge to Recovery.

El-Sayed Ahmed MM, Jones MB, Kanter JP, Boyce S, Jonas RA, Scheel J, Sinha P.

Ann Thorac Surg. 2016 Jun;101(6):e193-4. doi: 10.1016/j.athoracsur.2015.10.040.


Dendritic cell-specific Mgat2 knockout mice show antigen presentation defects but reveal an unexpected CD11c expression pattern.

Jones MB, Ryan SO, Johnson JL, Cobb BA.

Glycobiology. 2016 Sep;26(9):1007-1013. Epub 2016 May 4.


The effect of renovation of long-term temperate grassland on N2O emissions and N leaching from contrasting soils.

Krol DJ, Jones MB, Williams M, Richards KG, Bourdin F, Lanigan GJ.

Sci Total Environ. 2016 Aug 1;560-561:233-40. doi: 10.1016/j.scitotenv.2016.04.052. Epub 2016 Apr 19.


Suicidality Among Chronically Homeless People with Alcohol Problems Attenuates Following Exposure to Housing First.

Collins SE, Taylor EM, King VL, Hatsukami AS, Jones MB, Lee CY, Lenert J, Jing JM, Barker CR, Goldstein SC, Hardy RV, Kaese G, Nelson LA.

Suicide Life Threat Behav. 2016 Dec;46(6):655-663. doi: 10.1111/sltb.12250. Epub 2016 Apr 8.



Jones MB.

Percept Mot Skills. 2015 Dec;121(3):791-804. doi: 10.2466/26.PMS.121c25x1. Epub 2015 Dec 10. Review.


Library preparation methodology can influence genomic and functional predictions in human microbiome research.

Jones MB, Highlander SK, Anderson EL, Li W, Dayrit M, Klitgord N, Fabani MM, Seguritan V, Green J, Pride DT, Yooseph S, Biggs W, Nelson KE, Venter JC.

Proc Natl Acad Sci U S A. 2015 Nov 10;112(45):14024-9. doi: 10.1073/pnas.1519288112. Epub 2015 Oct 28.


Sensitizing Pseudomonas aeruginosa to antibiotics by electrochemical disruption of membrane functions.

Niepa TH, Snepenger LM, Wang H, Sivan S, Gilbert JL, Jones MB, Ren D.

Biomaterials. 2016 Jan;74:267-79. doi: 10.1016/j.biomaterials.2015.10.007. Epub 2015 Oct 9.


ChIP-Seq Analysis of the σE Regulon of Salmonella enterica Serovar Typhimurium Reveals New Genes Implicated in Heat Shock and Oxidative Stress Response.

Li J, Overall CC, Johnson RC, Jones MB, McDermott JE, Heffron F, Adkins JN, Cambronne ED.

PLoS One. 2015 Sep 21;10(9):e0138466. doi: 10.1371/journal.pone.0138466. eCollection 2015.


Stool microbiota composition is associated with the prospective risk of Plasmodium falciparum infection.

Yooseph S, Kirkness EF, Tran TM, Harkins DM, Jones MB, Torralba MG, O'Connell E, Nutman TB, Doumbo S, Doumbo OK, Traore B, Crompton PD, Nelson KE.

BMC Genomics. 2015 Aug 22;16:631. doi: 10.1186/s12864-015-1819-3.

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