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Items: 1 to 50 of 1064

1.

Author Correction: Landscape of somatic mutations in 560 breast cancer whole-genome sequences.

Nik-Zainal S, Davies H, Staaf J, Ramakrishna M, Glodzik D, Zou X, Martincorena I, Alexandrov LB, Martin S, Wedge DC, Van Loo P, Ju YS, Smid M, Brinkman AB, Morganella S, Aure MR, Lingjærde OC, Langerød A, Ringnér M, Ahn SM, Boyault S, Brock JE, Broeks A, Butler A, Desmedt C, Dirix L, Dronov S, Fatima A, Foekens JA, Gerstung M, Hooijer GKJ, Jang SJ, Jones DR, Kim HY, King TA, Krishnamurthy S, Lee HJ, Lee JY, Li Y, McLaren S, Menzies A, Mustonen V, O'Meara S, Pauporté I, Pivot X, Purdie CA, Raine K, Ramakrishnan K, Rodríguez-González FG, Romieu G, Sieuwerts AM, Simpson PT, Shepherd R, Stebbings L, Stefansson OA, Teague J, Tommasi S, Treilleux I, Van den Eynden GG, Vermeulen P, Vincent-Salomon A, Yates L, Caldas C, Van't Veer L, Tutt A, Knappskog S, Tan BKT, Jonkers J, Borg Å, Ueno NT, Sotiriou C, Viari A, Futreal PA, Campbell PJ, Span PN, Van Laere S, Lakhani SR, Eyfjord JE, Thompson AM, Birney E, Stunnenberg HG, van de Vijver MJ, Martens JWM, Børresen-Dale AL, Richardson AL, Kong G, Thomas G, Stratton MR.

Nature. 2019 Jan 18. doi: 10.1038/s41586-019-0883-2. [Epub ahead of print]

PMID:
30659290
2.

Patterns and risk of recurrence in patients with esophageal cancer with a pathologic complete response after chemoradiotherapy followed by surgery.

Barbetta A, Sihag S, Nobel T, Hsu M, Tan KS, Bains M, Jones DR, Molena D.

J Thorac Cardiovasc Surg. 2018 Nov 24. pii: S0022-5223(18)33122-2. doi: 10.1016/j.jtcvs.2018.09.136. [Epub ahead of print]

PMID:
30655068
3.

Outcomes of Stage III NSCLC with occult primary vs. known primary lesions.

Romesser PB, Bardash Y, Buonocore D, Chaft JE, Huang J, Jones DR, Rimner A, Wu AJ.

Lung Cancer. 2019 Jan;127:34-36. doi: 10.1016/j.lungcan.2018.11.019. Epub 2018 Nov 17.

PMID:
30642548
4.

Colonization of internal organs by Salmonella Enteritidis in experimentally infected laying hens of four commercial genetic lines in conventional cages and enriched colony housing.

Gast RK, Regmi P, Guraya R, Jones DR, Anderson KE, Karcher DM.

Poult Sci. 2018 Dec 11. doi: 10.3382/ps/pey541. [Epub ahead of print]

PMID:
30535349
5.

Pathologic Assessment After Neoadjuvant Chemotherapy for NSCLC: Importance and Implications of Distinguishing Adenocarcinoma From Squamous Cell Carcinoma.

Qu Y, Emoto K, Eguchi T, Aly RG, Zheng H, Chaft JE, Tan KS, Jones DR, Kris MG, Adusumilli PS, Travis WD.

J Thorac Oncol. 2018 Nov 29. pii: S1556-0864(18)33494-4. doi: 10.1016/j.jtho.2018.11.017. [Epub ahead of print]

PMID:
30503889
6.

Asynchronous optical sampling data-acquisition trigger-signal derived from pulse coherence coincidence.

Zhang H, Su B, Yang X, Wu Y, He J, Zhang C, Jones DR.

Rev Sci Instrum. 2018 Nov;89(11):113108. doi: 10.1063/1.5051072.

PMID:
30501358
7.

Histologic subtyping in pathologic stage I-IIA lung adenocarcinoma provides risk-based stratification for surveillance.

Takahashi Y, Eguchi T, Kameda K, Lu S, Vaghjiani RG, Tan KS, Travis WD, Jones DR, Adusumilli PS.

Oncotarget. 2018 Nov 6;9(87):35742-35751. doi: 10.18632/oncotarget.26285. eCollection 2018 Nov 6.

8.

Initial extended resection or neoadjuvant therapy for T4 non-small cell lung cancer-What is the evidence?

Ilonen I, Jones DR.

Shanghai Chest. 2018 Oct;2. pii: 76. doi: 10.21037/shc.2018.09.08. Epub 2018 Oct 11.

9.

A Prospective Study of Circulating Tumor DNA to Guide Matched Targeted Therapy in Lung Cancers.

Sabari JK, Offin M, Stephens D, Ni A, Lee A, Pavlakis N, Clarke S, Diakos CI, Datta S, Tandon N, Martinez A, Myers ML, Makhnin A, Leger Y, Yu HA, Paik PK, Chaft JE, Kris MG, Jeon JO, Borsu LA, Ladanyi M, Arcila ME, Hernandez J, Henderson S, Shaffer T, Garg K, DiPasquo D, Raymond CK, Lim LP, Li M, Hellmann MD, Drilon A, Riely GJ, Rusch VW, Jones DR, Rimner A, Rudin CM, Isbell JM, Li BT.

J Natl Cancer Inst. 2018 Nov 28. doi: 10.1093/jnci/djy156. [Epub ahead of print]

PMID:
30496436
10.

National guidelines may reduce socioeconomic disparities in treatment selection for esophageal cancer.

Nobel TB, Lavery JA, Barbetta A, Gennarelli RL, Lidor AO, Jones DR, Molena D.

Dis Esophagus. 2018 Nov 28. doi: 10.1093/dote/doy111. [Epub ahead of print]

PMID:
30496376
11.

A systematic review and meta-analysis of stereotactic body radiation therapy versus surgery for patients with non-small cell lung cancer.

Cao C, Wang D, Chung C, Tian D, Rimner A, Huang J, Jones DR.

J Thorac Cardiovasc Surg. 2019 Jan;157(1):362-373.e8. doi: 10.1016/j.jtcvs.2018.08.075. Epub 2018 Sep 15.

PMID:
30482524
12.

Incorporating Innovation and New Technology into Cardiothoracic Surgery.

Dearani JA, Rosengart TK, Marshall MB, Mack MJ, Jones DR, Prager RL, Cerfolio RJ.

Ann Thorac Surg. 2018 Nov 21. pii: S0003-4975(18)31672-2. doi: 10.1016/j.athoracsur.2018.10.022. [Epub ahead of print] Review.

PMID:
30471271
13.

Perioperative mortality and morbidity after sublobar versus lobar resection for early-stage non-small-cell lung cancer: post-hoc analysis of an international, randomised, phase 3 trial (CALGB/Alliance 140503).

Altorki NK, Wang X, Wigle D, Gu L, Darling G, Ashrafi AS, Landrenau R, Miller D, Liberman M, Jones DR, Keenan R, Conti M, Wright G, Veit LJ, Ramalingam SS, Kamel M, Pass HI, Mitchell JD, Stinchcombe T, Vokes E, Kohman LJ.

Lancet Respir Med. 2018 Dec;6(12):915-924. doi: 10.1016/S2213-2600(18)30411-9. Epub 2018 Nov 12.

PMID:
30442588
14.

Outcomes after neoadjuvant or adjuvant chemotherapy for cT2-4N0-1 non-small cell lung cancer: A propensity-matched analysis.

Brandt WS, Yan W, Zhou J, Tan KS, Montecalvo J, Park BJ, Adusumilli PS, Huang J, Bott MJ, Rusch VW, Molena D, Travis WD, Kris MG, Chaft JE, Jones DR.

J Thorac Cardiovasc Surg. 2018 Oct 10. pii: S0022-5223(18)32606-0. doi: 10.1016/j.jtcvs.2018.09.098. [Epub ahead of print]

PMID:
30415902
15.

Sentinel lymph node mapping in lung cancer: a step forward?

Caso R, Jones GD, Jones DR.

J Thorac Dis. 2018 Sep;10(Suppl 26):S3254-S3256. doi: 10.21037/jtd.2018.08.114. No abstract available.

16.

Aqueous electromigration of single-walled carbon nanotubes and co-electromigration with copper ions.

Raja PMV, Esquenazi GL, Wright KD, Gowenlock CE, Brinson BE, Alexander S, Jones DR, Gangoli VS, Barron AR.

Nanoscale. 2018 Nov 7;10(41):19628-19637. doi: 10.1039/c8nr06485g. Epub 2018 Oct 16.

PMID:
30325388
17.

Daily Links Between Sleep and Anger Among Spouses of Chronic Pain Patients.

Marini CM, Martire LM, Jones DR, Zhaoyang R, Buxton OM.

J Gerontol B Psychol Sci Soc Sci. 2018 Oct 4. doi: 10.1093/geronb/gby111. [Epub ahead of print]

PMID:
30285248
18.

Procedure-Specific Risk Prediction for Recurrence in Patients Undergoing Lobectomy or Sublobar Resection for Small (≤2 cm) Lung Adenocarcinoma: An International Cohort Analysis.

Bains S, Eguchi T, Warth A, Yeh YC, Nitadori JI, Woo KM, Chou TY, Dienemann H, Muley T, Nakajima J, Shinozaki-Ushiku A, Wu YC, Lu S, Kadota K, Jones DR, Travis WD, Tan KS, Adusumilli PS.

J Thorac Oncol. 2019 Jan;14(1):72-86. doi: 10.1016/j.jtho.2018.09.008. Epub 2018 Sep 22.

PMID:
30253972
19.

Lobectomy Is Associated with Better Outcomes than Sublobar Resection in Spread through Air Spaces (STAS)-Positive T1 Lung Adenocarcinoma: A Propensity Score-Matched Analysis.

Eguchi T, Kameda K, Lu S, Bott MJ, Tan KS, Montecalvo J, Chang JC, Rekhtman N, Jones DR, Travis WD, Adusumilli PS.

J Thorac Oncol. 2019 Jan;14(1):87-98. doi: 10.1016/j.jtho.2018.09.005. Epub 2018 Sep 19.

PMID:
30244070
20.

Multimodality Therapy for N2 Non-Small Cell Lung Cancer: An Evolving Paradigm.

Spicer JD, Shewale JB, Nelson DB, Mitchell KG, Bott MJ, Vallières E, Wilshire CL, Vaporciyan AA, Swisher SG, Jones DR, Darling GE, Sepesi B.

Ann Thorac Surg. 2019 Jan;107(1):277-284. doi: 10.1016/j.athoracsur.2018.07.033. Epub 2018 Sep 15.

PMID:
30227129
21.

Negative and positive affect as predictors of inflammation: Timing matters.

Graham-Engeland JE, Sin NL, Smyth JM, Jones DR, Knight EL, Sliwinski MJ, Almeida DM, Katz MJ, Lipton RB, Engeland CG.

Brain Behav Immun. 2018 Nov;74:222-230. doi: 10.1016/j.bbi.2018.09.011. Epub 2018 Sep 11.

PMID:
30217538
22.

Outcomes of Radiation-Associated Esophageal Squamous Cell Carcinoma: The MSKCC Experience.

Nobel TB, Barbetta A, Hsu M, Tan KS, Pinchinat T, Schlottmann F, Bains MS, Ku GY, Wu AJ, Patti MG, Jones DR, Molena D.

J Gastrointest Surg. 2019 Jan;23(1):11-22. doi: 10.1007/s11605-018-3958-8. Epub 2018 Sep 13.

PMID:
30215197
23.
24.

Prevalence, Persistence, and Antimicrobial Resistance of Campylobacter spp. from Eggs and Laying Hens Housed in Five Commercial Housing Systems.

Novoa Rama E, Bailey M, Jones DR, Gast RK, Anderson K, Brar J, Taylor R, Oliver HF, Singh M.

Foodborne Pathog Dis. 2018 Aug;15(8):506-516. doi: 10.1089/fpd.2017.2404.

PMID:
30124342
25.

Clinical outcomes of patients with resected, early-stage ALK-positive lung cancer.

Chaft JE, Dagogo-Jack I, Santini FC, Eng J, Yeap BY, Izar B, Chin E, Jones DR, Kris MG, Shaw AT, Gainor JF.

Lung Cancer. 2018 Aug;122:67-71. doi: 10.1016/j.lungcan.2018.05.020. Epub 2018 May 22.

PMID:
30032847
26.

More Frequent Surveillance Following Lung Cancer Resection Is Not Associated With Improved Survival: A Nationally Representative Cohort Study.

McMurry TL, Stukenborg GJ, Kessler LG, Colditz GA, Wong ML, Francescatti AB, Jones DR, Schumacher JR, Greenberg CC, Chang GJ, Winchester DP, McKellar DP, Kozower BD.

Ann Surg. 2018 Oct;268(4):632-639. doi: 10.1097/SLA.0000000000002955.

PMID:
30004919
27.

Clarifying the Associations between Mindfulness Meditation and Emotion: Daily High- and Low-arousal Emotions and Emotional Variability.

Jones DR, Graham-Engeland JE, Smyth JM, Lehman BJ.

Appl Psychol Health Well Being. 2018 Nov;10(3):504-523. doi: 10.1111/aphw.12135. Epub 2018 Jul 10.

PMID:
29992747
28.

Pathologic features of response to neoadjuvant anti-PD-1 in resected non-small-cell lung carcinoma: a proposal for quantitative immune-related pathologic response criteria (irPRC).

Cottrell TR, Thompson ED, Forde PM, Stein JE, Duffield AS, Anagnostou V, Rekhtman N, Anders RA, Cuda JD, Illei PB, Gabrielson E, Askin FB, Niknafs N, Smith KN, Velez MJ, Sauter JL, Isbell JM, Jones DR, Battafarano RJ, Yang SC, Danilova L, Wolchok JD, Topalian SL, Velculescu VE, Pardoll DM, Brahmer JR, Hellmann MD, Chaft JE, Cimino-Mathews A, Taube JM.

Ann Oncol. 2018 Aug 1;29(8):1853-1860. doi: 10.1093/annonc/mdy218.

PMID:
29982279
29.

Adipocyte-Derived Lipids Mediate Melanoma Progression via FATP Proteins.

Zhang M, Di Martino JS, Bowman RL, Campbell NR, Baksh SC, Simon-Vermot T, Kim IS, Haldeman P, Mondal C, Yong-Gonzales V, Abu-Akeel M, Merghoub T, Jones DR, Zhu XG, Arora A, Ariyan CE, Birsoy K, Wolchok JD, Panageas KS, Hollmann T, Bravo-Cordero JJ, White RM.

Cancer Discov. 2018 Aug;8(8):1006-1025. doi: 10.1158/2159-8290.CD-17-1371. Epub 2018 Jun 14.

PMID:
29903879
30.

Assessing the stability of Cd, Mn, Pb, Se, and total Hg in whole human blood by ICP-DRC-MS as a function of temperature and time.

Tevis DS, Jarrett JM, Jones DR, Cheng PY, Franklin M, Mullinex N, Caldwell KL, Jones RL.

Clin Chim Acta. 2018 Oct;485:1-6. doi: 10.1016/j.cca.2018.05.043. Epub 2018 Jun 9.

PMID:
29894782
31.

Isotope Labeling-Assisted Evaluation of Hydrophilic and Hydrophobic Liquid Chromatograph-Mass Spectrometry for Metabolomics Profiling.

Xie B, Wang Y, Jones DR, Dey KK, Wang X, Li Y, Cho JH, Shaw TI, Tan H, Peng J.

Anal Chem. 2018 Jul 17;90(14):8538-8545. doi: 10.1021/acs.analchem.8b01591. Epub 2018 Jun 25.

32.

Effects of different litter substrates and induced molt on production performance and welfare quality parameters of white Leghorn hens housed in multi-tiered aviary system.

Regmi P, Robison CI, Jones DR, Gast RK, Tempelman RJ, Karcher DM.

Poult Sci. 2018 Oct 1;97(10):3397-3404. doi: 10.3382/ps/pey211.

PMID:
29878244
33.

Stereotactic Body Radiation Therapy: Focusing on the Short Game.

Cao C, Huang J, Rimner A, Wang D, Chung C, Jones DR.

J Clin Oncol. 2018 Aug 10;36(23):2455-2456. doi: 10.1200/JCO.2018.78.2268. Epub 2018 Jun 4. No abstract available.

PMID:
29863976
34.

Postoperative Radiotherapy for Surgically Resected ypN2 Non-Small Cell Lung Cancer.

Brandt WS, Yan W, Leeman JE, Tan KS, Park BJ, Adusumilli PS, Bott MJ, Molena D, Isbell J, Chaft J, Rimner A, Jones DR.

Ann Thorac Surg. 2018 Sep;106(3):848-855. doi: 10.1016/j.athoracsur.2018.04.064. Epub 2018 May 26.

PMID:
29807005
35.

Restraint of adults with intellectual disabilities: A critical review of the prevalence and characteristics associated with its use.

Fitton L, Jones DR.

J Intellect Disabil. 2018 Jan 1:1744629518778695. doi: 10.1177/1744629518778695. [Epub ahead of print]

PMID:
29793389
36.

Target-Decoy-Based False Discovery Rate Estimation for Large-Scale Metabolite Identification.

Wang X, Jones DR, Shaw TI, Cho JH, Wang Y, Tan H, Xie B, Zhou S, Li Y, Peng J.

J Proteome Res. 2018 Jul 6;17(7):2328-2334. doi: 10.1021/acs.jproteome.8b00019. Epub 2018 May 29.

37.

Neutrophil to Lymphocyte Ratio as Predictor of Treatment Response in Esophageal Squamous Cell Cancer.

Barbetta A, Nobel TB, Sihag S, Hsu M, Tan KS, Bains MS, Isbell JM, Janjigian YY, Wu AJ, Bott MJ, Jones DR, Molena D.

Ann Thorac Surg. 2018 Sep;106(3):864-871. doi: 10.1016/j.athoracsur.2018.04.007. Epub 2018 May 5.

PMID:
29738752
38.

Is Perceived Growth Associated with Momentary Indicators of Health and Well-Being in People with Asthma or Rheumatoid Arthritis?

Jones DR, Johnson JA, Graham-Engeland JE, Park CL, Smyth JM.

Appl Psychol Health Well Being. 2018 Jul;10(2):254-271. doi: 10.1111/aphw.12129. Epub 2018 Apr 19.

PMID:
29673088
39.

Minimally Invasive Lobectomy Is Associated With Lower Noncancer-specific Mortality in Elderly Patients: A Propensity Score Matched Competing Risks Analysis.

Hristov B, Eguchi T, Bains S, Dycoco J, Tan KS, Isbell JM, Park BJ, Jones DR, Adusumilli PS.

Ann Surg. 2018 Apr 18. doi: 10.1097/SLA.0000000000002772. [Epub ahead of print]

PMID:
29672399
40.

Neoadjuvant PD-1 Blockade in Resectable Lung Cancer.

Forde PM, Chaft JE, Smith KN, Anagnostou V, Cottrell TR, Hellmann MD, Zahurak M, Yang SC, Jones DR, Broderick S, Battafarano RJ, Velez MJ, Rekhtman N, Olah Z, Naidoo J, Marrone KA, Verde F, Guo H, Zhang J, Caushi JX, Chan HY, Sidhom JW, Scharpf RB, White J, Gabrielson E, Wang H, Rosner GL, Rusch V, Wolchok JD, Merghoub T, Taube JM, Velculescu VE, Topalian SL, Brahmer JR, Pardoll DM.

N Engl J Med. 2018 May 24;378(21):1976-1986. doi: 10.1056/NEJMoa1716078. Epub 2018 Apr 16.

41.

Feasibility of endobronchial ultrasound transbronchial needle aspiration for massively parallel next-generation sequencing in thoracic cancer patients.

Turner SR, Buonocore D, Desmeules P, Rekhtman N, Dogan S, Lin O, Arcila ME, Jones DR, Huang J.

Lung Cancer. 2018 May;119:85-90. doi: 10.1016/j.lungcan.2018.03.003. Epub 2018 Mar 7.

PMID:
29656758
42.

Predictors of Nodal Metastases for Clinical T2N0 Esophageal Adenocarcinoma.

Barbetta A, Schlottmann F, Nobel T, Sewell DB, Hsu M, Tan KS, Gerdes H, Shah P, Bains MS, Bott M, Isbell JM, Jones DR, Molena D.

Ann Thorac Surg. 2018 Jul;106(1):172-177. doi: 10.1016/j.athoracsur.2018.02.087. Epub 2018 Apr 5.

PMID:
29627387
43.

Identification of novel enzymes to enhance the ruminal digestion of barley straw.

Badhan A, Ribeiro GO Jr, Jones DR, Wang Y, Abbott DW, Di Falco M, Tsang A, McAllister TA.

Bioresour Technol. 2018 Jul;260:76-84. doi: 10.1016/j.biortech.2018.03.086. Epub 2018 Mar 28.

PMID:
29621684
44.

Hen genetic strain and extended cold storage influence on physical egg quality from cage-free aviary housing system.

Jones DR, Karcher DM, Regmi P, Robison CO, Gast RK.

Poult Sci. 2018 Jul 1;97(7):2347-2355. doi: 10.3382/ps/pex052.

PMID:
29617856
45.

Circulating tumor DNA: A promising biomarker to guide postoperative treatment and surveillance of non-small cell lung cancer.

Isbell JM, Jones DR, Li BT.

J Thorac Cardiovasc Surg. 2018 Jun;155(6):2628-2631. doi: 10.1016/j.jtcvs.2017.12.157. Epub 2018 Mar 13. No abstract available.

PMID:
29615336
46.

Safety and Feasibility of Lung Resection After Immunotherapy for Metastatic or Unresectable Tumors.

Bott MJ, Cools-Lartigue J, Tan KS, Dycoco J, Bains MS, Downey RJ, Huang J, Isbell JM, Molena D, Park BJ, Rusch VW, Sihag S, Jones DR, Adusumilli PS.

Ann Thorac Surg. 2018 Jul;106(1):178-183. doi: 10.1016/j.athoracsur.2018.02.030. Epub 2018 Mar 14.

PMID:
29550207
47.

Definitive chemoradiotherapy versus neoadjuvant chemoradiotherapy followed by surgery for stage II to III esophageal squamous cell carcinoma.

Barbetta A, Hsu M, Tan KS, Stefanova D, Herman K, Adusumilli PS, Bains MS, Bott MJ, Isbell JM, Janjigian YY, Ku GY, Park BJ, Wu AJ, Jones DR, Molena D.

J Thorac Cardiovasc Surg. 2018 Jun;155(6):2710-2721.e3. doi: 10.1016/j.jtcvs.2018.01.086. Epub 2018 Feb 15.

PMID:
29548582
48.

Regioselectivity significantly impacts microsomal glucuronidation efficiency of R/S-6, 7-, and 8-hydroxywarfarin.

Kim SY, Jones DR, Kang JY, Yun CH, Miller GP.

Xenobiotica. 2018 Mar 28:1-7. doi: 10.1080/00498254.2018.1451668. [Epub ahead of print]

PMID:
29543105
49.

Quality of Endoscopy Reports for Esophageal Cancer Patients: Where Do We Stand?

Barbetta A, Faraz S, Shah P, Gerdes H, Hsu M, Tan KS, Nobel T, Bains MS, Bott M, Isbell JM, Sewell DB, Jones DR, Molena D.

J Gastrointest Surg. 2018 May;22(5):778-784. doi: 10.1007/s11605-018-3710-4. Epub 2018 Mar 5.

PMID:
29508217
50.

Bending the Curve: The Importance of Expertise.

Jones DR.

Ann Thorac Surg. 2018 May;105(5):1287-1293. doi: 10.1016/j.athoracsur.2018.01.040. Epub 2018 Feb 17. No abstract available.

PMID:
29458001

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