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Items: 1 to 50 of 754

1.

Regulating colonic dendritic cells by commensal glycosylated large surface layer protein A to sustain gut homeostasis against pathogenic inflammation.

Ge Y, Gong M, Zadeh M, Li J, Abbott JR, Li W, Morel L, Sonon R, Supekar NT, Azadi P, Wang Y, Jones DP, Li S, Mohamadzadeh M.

Mucosal Immunol. 2019 Oct 16. doi: 10.1038/s41385-019-0210-0. [Epub ahead of print]

PMID:
31619761
2.

Development of a Plasma Screening Panel for Pediatric Nonalcoholic Fatty Liver Disease Using Metabolomics.

Khusial RD, Cioffi CE, Caltharp SA, Krasinskas AM, Alazraki A, Knight-Scott J, Cleeton R, Castillo-Leon E, Jones DP, Pierpont B, Caprio S, Santoro N, Akil A, Vos MB.

Hepatol Commun. 2019 Aug 13;3(10):1311-1321. doi: 10.1002/hep4.1417. eCollection 2019 Oct.

3.

A precision medicine approach to defining the impact of doxorubicin on the bioenergetic-metabolite interactome in human platelets.

Smith MR, Chacko BK, Johnson MS, Benavides GA, Uppal K, Go YM, Jones DP, Darley-Usmar VM.

Redox Biol. 2019 Sep 7;28:101311. doi: 10.1016/j.redox.2019.101311. [Epub ahead of print]

4.

Acute kidney injury risk-based screening in pediatric inpatients: a pragmatic randomized trial.

Van Driest SL, Wang L, McLemore MF, Bridges BC, Fleming GM, McGregor TL, Jones DP, Shirey-Rice J, Gatto CL, Gay JC, Byrne DW, Weitkamp A, Roden DM, Bernard G.

Pediatr Res. 2019 Aug 27. doi: 10.1038/s41390-019-0550-1. [Epub ahead of print]

PMID:
31454829
5.

Transcriptome Analysis Reveals Distinct Responses to Physiologic versus Toxic Manganese Exposure in Human Neuroblastoma Cells.

Fernandes J, Chandler JD, Lili LN, Uppal K, Hu X, Hao L, Go YM, Jones DP.

Front Genet. 2019 Jul 24;10:676. doi: 10.3389/fgene.2019.00676. eCollection 2019.

6.

Arginine and Carnitine Metabolites Are Altered in Diabetic Retinopathy.

Sumarriva K, Uppal K, Ma C, Herren DJ, Wang Y, Chocron IM, Warden C, Mitchell SL, Burgess LG, Goodale MP, Osborn MP, Ferreira AJ, Law JC, Cherney EF, Jones DP, Brantley MA Jr.

Invest Ophthalmol Vis Sci. 2019 Jul 1;60(8):3119-3126. doi: 10.1167/iovs.19-27321.

7.

A non-lethal malarial infection results in reduced drug metabolizing enzyme expression and drug clearance in mice.

Mimche SM, Lee CM, Liu KH, Mimche PN, Harvey RD, Murphy TJ, Nyagode BA, Jones DP, Lamb TJ, Morgan ET.

Malar J. 2019 Jul 12;18(1):234. doi: 10.1186/s12936-019-2860-5.

8.

Understanding mixed environmental exposures using metabolomics via a hierarchical community network model in a cohort of California women in 1960's.

Li S, Cirillo P, Hu X, Tran V, Krigbaum N, Yu S, Jones DP, Cohn B.

Reprod Toxicol. 2019 Jul 9. pii: S0890-6238(18)30603-8. doi: 10.1016/j.reprotox.2019.06.013. [Epub ahead of print]

PMID:
31299210
9.

ADAP-GC 4.0: Application of Clustering-Assisted Multivariate Curve Resolution to Spectral Deconvolution of Gas Chromatography-Mass Spectrometry Metabolomics Data.

Smirnov A, Qiu Y, Jia W, Walker DI, Jones DP, Du X.

Anal Chem. 2019 Jul 16;91(14):9069-9077. doi: 10.1021/acs.analchem.9b01424. Epub 2019 Jul 5.

10.

Phytochelatin database: a resource for phytochelatin complexes of nutritional and environmental metals.

Dennis KK, Uppal K, Liu KH, Ma C, Liang B, Go YM, Jones DP.

Database (Oxford). 2019 Jan 1;2019. pii: baz083. doi: 10.1093/database/baz083.

11.

Urinary apolipoprotein AI in children with kidney disease.

Clark AJ, Jabs K, Hunley TE, Jones DP, VanDeVoorde RG, Anderson C, Du L, Zhong J, Fogo AB, Yang H, Kon V.

Pediatr Nephrol. 2019 Nov;34(11):2351-2360. doi: 10.1007/s00467-019-04289-5. Epub 2019 Jun 23.

PMID:
31230128
12.

Maternal serum metabolome and traffic-related air pollution exposure in pregnancy.

Yan Q, Liew Z, Uppal K, Cui X, Ling C, Heck JE, von Ehrenstein OS, Wu J, Walker DI, Jones DP, Ritz B.

Environ Int. 2019 Sep;130:104872. doi: 10.1016/j.envint.2019.05.066. Epub 2019 Jun 20.

13.

Metabolomics of childhood exposure to perfluoroalkyl substances: a cross-sectional study.

Kingsley SL, Walker DI, Calafat AM, Chen A, Papandonatos GD, Xu Y, Jones DP, Lanphear BP, Pennell KD, Braun JM.

Metabolomics. 2019 Jun 21;15(7):95. doi: 10.1007/s11306-019-1560-z.

PMID:
31227916
14.

Cyclic O3 exposure synergizes with aging leading to memory impairment in male APOE ε3, but not APOE ε4, targeted replacement mice.

Jiang C, Stewart LT, Kuo HC, McGilberry W, Wall SB, Liang B, van Groen T, Bailey SM, Kim YI, Tipple TE, Jones DP, McMahon LL, Liu RM.

Neurobiol Aging. 2019 Sep;81:9-21. doi: 10.1016/j.neurobiolaging.2019.05.006. Epub 2019 May 17.

15.

Enhanced Keap1-Nrf2 signaling protects the myocardium from isoproterenol-induced pathological remodeling in mice.

Shanmugam G, Challa AK, Litovsky SH, Devarajan A, Wang D, Jones DP, Darley-Usmar VM, Rajasekaran NS.

Redox Biol. 2019 May 4:101212. doi: 10.1016/j.redox.2019.101212. [Epub ahead of print]

16.

Response of Beef Cattle Fecal Microbiota to Grazing on Toxic Tall Fescue.

Mote RS, Hill NS, Skarlupka JH, Turner ZB, Sanders ZP, Jones DP, Suen G, Filipov NM.

Appl Environ Microbiol. 2019 Jul 18;85(15). pii: e00032-19. doi: 10.1128/AEM.00032-19. Print 2019 Aug 1.

PMID:
31126949
17.

Metabolome Wide Association Study of Serum Poly and Perfluoroalkyl Substances (PFASs) in Pregnancy and Early Postpartum.

Hu X, Li S, Cirillo PM, Krigbaum NY, Tran V, Jones DP, Cohn BA.

Reprod Toxicol. 2019 Aug;87:70-78. doi: 10.1016/j.reprotox.2019.05.058. Epub 2019 May 20.

PMID:
31121237
18.

Environmental Cadmium Enhances Lung Injury by Respiratory Syncytial Virus Infection.

Hu X, Kim KH, Lee Y, Fernandes J, Smith MR, Jung YJ, Orr M, Kang SM, Jones DP, Go YM.

Am J Pathol. 2019 Aug;189(8):1513-1525. doi: 10.1016/j.ajpath.2019.04.013. Epub 2019 May 18.

PMID:
31108100
19.

Metabolome Wide Association Study of serum DDT and DDE in Pregnancy and Early Postpartum.

Hu X, Li S, Cirillo P, Krigbaum N, Tran V, Ishikawa T, La Merrill MA, Jones DP, Cohn B.

Reprod Toxicol. 2019 May 15. pii: S0890-6238(18)30588-4. doi: 10.1016/j.reprotox.2019.05.059. [Epub ahead of print]

PMID:
31102720
20.

Distinct amino acid and lipid perturbations characterize acute versus chronic malaria.

Cordy RJ, Patrapuvich R, Lili LN, Cabrera-Mora M, Chien JT, Tharp GK, Khadka M, Meyer EV, Lapp SA, Joyner CJ, Garcia A, Banton S, Tran V, Luvira V, Rungin S, Saeseu T, Rachaphaew N, Pakala SB, DeBarry JD; MaHPIC Consortium, Kissinger JC, Ortlund EA, Bosinger SE, Barnwell JW, Jones DP, Uppal K, Li S, Sattabongkot J, Moreno A, Galinski MR.

JCI Insight. 2019 May 2;4(9). pii: 125156. doi: 10.1172/jci.insight.125156. eCollection 2019 May 2.

21.

Low-dose cadmium potentiates lung inflammatory response to 2009 pandemic H1N1 influenza virus in mice.

Chandler JD, Hu X, Ko EJ, Park S, Fernandes J, Lee YT, Orr ML, Hao L, Smith MR, Neujahr DC, Uppal K, Kang SM, Jones DP, Go YM.

Environ Int. 2019 Jun;127:720-729. doi: 10.1016/j.envint.2019.03.054. Epub 2019 Apr 15.

22.

Role of heat shock protein and cytokine expression as markers of clinical outcomes with glutamine-supplemented parenteral nutrition in surgical ICU patients.

Wischmeyer PE, Mintz-Cole RA, Baird CH, Easley KA, May AK, Sax HC, Kudsk KA, Hao L, Tran PH, Jones DP, Blumberg HM, Ziegler TR.

Clin Nutr. 2019 Mar 13. pii: S0261-5614(19)30099-8. doi: 10.1016/j.clnu.2019.02.045. [Epub ahead of print]

PMID:
30981628
23.

Perturbations of the arginine metabolome following exposures to traffic-related air pollution in a panel of commuters with and without asthma.

Liang D, Ladva CN, Golan R, Yu T, Walker DI, Sarnat SE, Greenwald R, Uppal K, Tran V, Jones DP, Russell AG, Sarnat JA.

Environ Int. 2019 Jun;127:503-513. doi: 10.1016/j.envint.2019.04.003. Epub 2019 Apr 10.

24.

Alterations in immune and renal biomarkers among workers occupationally exposed to low levels of trichloroethylene below current regulatory standards.

Lee KM, Zhang L, Vermeulen R, Hu W, Bassig BA, Wong JJ, Qiu C, Purdue M, Wen C, Walker DI, Jones DP, Li L, Huang Y, Rothman N, Smith MT, Lan Q.

Occup Environ Med. 2019 Jun;76(6):376-381. doi: 10.1136/oemed-2018-105583. Epub 2019 Apr 10.

PMID:
30971425
25.

Redox Systems Biology of Nutrition and Oxidative Stress.

Dennis KK, Go YM, Jones DP.

J Nutr. 2019 Apr 1;149(4):553-565. doi: 10.1093/jn/nxy306.

PMID:
30949678
26.

Mitochondria in precision medicine; linking bioenergetics and metabolomics in platelets.

Chacko BK, Smith MR, Johnson MS, Benavides G, Culp ML, Pilli J, Shiva S, Uppal K, Go YM, Jones DP, Darley-Usmar VM.

Redox Biol. 2019 Apr;22:101165. doi: 10.1016/j.redox.2019.101165. Epub 2019 Mar 10.

27.

Perfluoroalkyl substances, metabolomic profiling, and alterations in glucose homeostasis among overweight and obese Hispanic children: A proof-of-concept analysis.

Alderete TL, Jin R, Walker DI, Valvi D, Chen Z, Jones DP, Peng C, Gilliland FD, Berhane K, Conti DV, Goran MI, Chatzi L.

Environ Int. 2019 May;126:445-453. doi: 10.1016/j.envint.2019.02.047. Epub 2019 Mar 4.

28.

Multigenerational metabolic profiling in the Michigan PBB registry.

Walker DI, Marder ME, Yano Y, Terrell M, Liang Y, Barr DB, Miller GW, Jones DP, Marcus M, Pennell KD.

Environ Res. 2019 May;172:182-193. doi: 10.1016/j.envres.2019.02.018. Epub 2019 Feb 13.

PMID:
30782538
29.

A biplot correlation range for group-wise metabolite selection in mass spectrometry.

Park YH, Kong T, Roede JR, Jones DP, Lee K.

BioData Min. 2019 Feb 4;12:4. doi: 10.1186/s13040-019-0191-2. eCollection 2019.

30.

Metabolomic Responses to Manganese Dose in SH-SY5Y Human Neuroblastoma Cells.

Fernandes J, Chandler JD, Liu KH, Uppal K, Hao L, Hu X, Go YM, Jones DP.

Toxicol Sci. 2019 May 1;169(1):84-94. doi: 10.1093/toxsci/kfz028.

PMID:
30715528
31.

Metabolic perturbations in classic galactosemia beyond the Leloir pathway: Insights from an untargeted metabolomic study.

Taylor Fischer S, Frederick AB, Tran V, Li S, Jones DP, Fridovich-Keil JL.

J Inherit Metab Dis. 2019 Mar;42(2):254-263. doi: 10.1002/jimd.12007. Epub 2019 Jan 22.

PMID:
30667068
32.

Neonatal intestinal immune regulation by the commensal bacterium, P. UF1.

Ge Y, Gong M, Colliou N, Zadeh M, Li J, Jones DP, Li S, Mohamadzadeh M.

Mucosal Immunol. 2019 Mar;12(2):434-444. doi: 10.1038/s41385-018-0125-1. Epub 2019 Jan 15.

33.

The metabolome as a biomarker of mortality risk in the common marmoset.

Hoffman JM, Ross C, Tran V, Promislow DEL, Tardif S, Jones DP.

Am J Primatol. 2019 Feb;81(2):e22944. doi: 10.1002/ajp.22944. Epub 2018 Dec 26.

PMID:
30585652
34.

Low-dose cadmium disrupts mitochondrial citric acid cycle and lipid metabolism in mouse lung.

Hu X, Chandler JD, Park S, Liu K, Fernandes J, Orr M, Smith MR, Ma C, Kang SM, Uppal K, Jones DP, Go YM.

Free Radic Biol Med. 2019 Feb 1;131:209-217. doi: 10.1016/j.freeradbiomed.2018.12.005. Epub 2018 Dec 6.

PMID:
30529385
35.

Metabolome-wide association study of anti-epileptic drug treatment during pregnancy.

Walker DI, Perry-Walker K, Finnell RH, Pennell KD, Tran V, May RC, McElrath TF, Meador KJ, Pennell PB, Jones DP.

Toxicol Appl Pharmacol. 2019 Jan 15;363:122-130. doi: 10.1016/j.taap.2018.12.001. Epub 2018 Dec 4.

PMID:
30521819
36.

Metabolomic assessment of exposure to near-highway ultrafine particles.

Walker DI, Lane KJ, Liu K, Uppal K, Patton AP, Durant JL, Jones DP, Brugge D, Pennell KD.

J Expo Sci Environ Epidemiol. 2019 Jun;29(4):469-483. doi: 10.1038/s41370-018-0102-5. Epub 2018 Dec 5.

37.

Proteomic analysis of microbial induced redox-dependent intestinal signaling.

Matthews JD, Reedy AR, Wu H, Hinrichs BH, Darby TM, Addis C, Robinson BS, Go YM, Jones DP, Jones RM, Neish AS.

Redox Biol. 2019 Jan;20:526-532. doi: 10.1016/j.redox.2018.11.011. Epub 2018 Nov 22.

38.

Therapeutic Approaches Targeting Inflammation in Cardiovascular Disorders.

Jones DP, Patel J.

Biology (Basel). 2018 Nov 16;7(4). pii: E49. doi: 10.3390/biology7040049. Review.

39.

Symptom Science Research in the Era of Big Data: Leveraging Interdisciplinary Resources and Partners to Make It Happen.

Corwin EJ, Jones DP, Dunlop AL.

J Nurs Scholarsh. 2019 Jan;51(1):4-8. doi: 10.1111/jnu.12446. Epub 2018 Nov 19.

PMID:
30450669
40.

The Carnitine Shuttle Pathway is Altered in Patients With Neovascular Age-Related Macular Degeneration.

Mitchell SL, Uppal K, Williamson SM, Liu K, Burgess LG, Tran V, Umfress AC, Jarrell KL, Cooke Bailey JN, Agarwal A, Pericak-Vance M, Haines JL, Scott WK, Jones DP, Brantley MA Jr.

Invest Ophthalmol Vis Sci. 2018 Oct 1;59(12):4978-4985. doi: 10.1167/iovs.18-25137.

41.

High-resolution plasma metabolomics analysis to detect Mycobacterium tuberculosis-associated metabolites that distinguish active pulmonary tuberculosis in humans.

Collins JM, Walker DI, Jones DP, Tukvadze N, Liu KH, Tran VT, Uppal K, Frediani JK, Easley KA, Shenvi N, Khadka M, Ortlund EA, Kempker RR, Blumberg HM, Ziegler TR.

PLoS One. 2018 Oct 11;13(10):e0205398. doi: 10.1371/journal.pone.0205398. eCollection 2018.

42.

Pilot randomized controlled trial of a Mediterranean diet or diet supplemented with fish oil, walnuts, and grape juice in overweight or obese US adults.

Jaacks LM, Sher S, Staercke C, Porkert M, Alexander WR, Jones DP, Vaccarino V, Ziegler TR, Quyyumi AA.

BMC Nutr. 2018;4:26. doi: 10.1186/s40795-018-0234-y. Epub 2018 May 31.

43.

Particulate metal exposures induce plasma metabolome changes in a commuter panel study.

Ladva CN, Golan R, Liang D, Greenwald R, Walker DI, Uppal K, Raysoni AU, Tran V, Yu T, Flanders WD, Miller GW, Jones DP, Sarnat JA.

PLoS One. 2018 Sep 19;13(9):e0203468. doi: 10.1371/journal.pone.0203468. eCollection 2018.

44.

Myeloperoxidase oxidation of methionine associates with early cystic fibrosis lung disease.

Chandler JD, Margaroli C, Horati H, Kilgore MB, Veltman M, Liu HK, Taurone AJ, Peng L, Guglani L, Uppal K, Go YM, Tiddens HAWM, Scholte BJ, Tirouvanziam R, Jones DP, Janssens HM.

Eur Respir J. 2018 Oct 10;52(4). pii: 1801118. doi: 10.1183/13993003.01118-2018. Print 2018 Oct.

PMID:
30190273
45.

Determination of thiocyanate in exhaled breath condensate.

Chandler JD, Horati H, Walker DI, Pagliano E, Tirouvanziam R, Veltman M, Scholte BJ, Janssens HM, Go YM, Jones DP.

Free Radic Biol Med. 2018 Oct;126:334-340. doi: 10.1016/j.freeradbiomed.2018.08.012. Epub 2018 Aug 22.

46.

The Exposome: Molecules to Populations.

Niedzwiecki MM, Walker DI, Vermeulen R, Chadeau-Hyam M, Jones DP, Miller GW.

Annu Rev Pharmacol Toxicol. 2019 Jan 6;59:107-127. doi: 10.1146/annurev-pharmtox-010818-021315. Epub 2018 Aug 10.

PMID:
30095351
47.

Use of high-resolution metabolomics for the identification of metabolic signals associated with traffic-related air pollution.

Liang D, Moutinho JL, Golan R, Yu T, Ladva CN, Niedzwiecki M, Walker DI, Sarnat SE, Chang HH, Greenwald R, Jones DP, Russell AG, Sarnat JA.

Environ Int. 2018 Nov;120:145-154. doi: 10.1016/j.envint.2018.07.044. Epub 2018 Aug 7.

48.

Selenium Supplementation Alters Hepatic Energy and Fatty Acid Metabolism in Mice.

Hu X, Chandler JD, Orr ML, Hao L, Liu K, Uppal K, Go YM, Jones DP.

J Nutr. 2018 May 1;148(5):675-684. doi: 10.1093/jn/nxy036.

49.

Selenium at the redox interface of the genome, metabolome and exposome.

Fernandes J, Hu X, Ryan Smith M, Go YM, Jones DP.

Free Radic Biol Med. 2018 Nov 1;127:215-227. doi: 10.1016/j.freeradbiomed.2018.06.002. Epub 2018 Jun 5. Review.

PMID:
29883789
50.

Redox Equivalents and Mitochondrial Bioenergetics.

Roede JR, Go YM, Jones DP.

Methods Mol Biol. 2018;1782:197-227. doi: 10.1007/978-1-4939-7831-1_12.

PMID:
29851002

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