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Items: 1 to 50 of 150

1.

Better together: building protein oligomers naturally and by design.

Gwyther REA, Jones DD, Worthy HL.

Biochem Soc Trans. 2019 Dec 20;47(6):1773-1780. doi: 10.1042/BST20190283.

2.

Site-Specific Protein Photochemical Covalent Attachment to Carbon Nanotube Side Walls and Its Electronic Impact on Single Molecule Function.

Thomas SK, Jamieson WD, Gwyther REA, Bowen BJ, Beachey A, Worthy HL, Macdonald JE, Elliott M, Castell OK, Jones DD.

Bioconjug Chem. 2020 Jan 7. doi: 10.1021/acs.bioconjchem.9b00719. [Epub ahead of print]

PMID:
31743647
3.

Association of serum levels of p,p'- Dichlorodiphenyldichloroethylene (DDE) with type 2 diabetes in African American and Caucasian adult men from agricultural (Delta) and non-agricultural (non-Delta) regions of Mississippi.

Meek EC, Jones DD, Crow JA, Wills RW, Cooke WH 3rd, Chambers JE.

J Toxicol Environ Health A. 2019;82(6):387-400. doi: 10.1080/15287394.2019.1610678. Epub 2019 May 7.

PMID:
31064277
4.

Acyclic 1,2-dimagnesioethanes/-ethene derived from magnesium(i) compounds: multipurpose reagents for organometallic synthesis.

Dange D, Gair AR, Jones DDL, Juckel M, Aldridge S, Jones C.

Chem Sci. 2019 Feb 4;10(11):3208-3216. doi: 10.1039/c9sc00200f. eCollection 2019 Mar 21.

5.

The complex reactivity of β-diketiminato magnesium(i) dimers towards pinacolborane: implications for catalysis.

Jones DDL, Matthews AJR, Jones C.

Dalton Trans. 2019 Apr 23;48(17):5785-5792. doi: 10.1039/c9dt01085h.

PMID:
30977493
6.

Bacterial Gall of Loropetalum chinense caused by Pseudomonas amygdali pv. loropetali pv. nov.

Harmon CL, Timilsina S, Bonkowski J, Jones DD, Sun X, Vallad GE, Sepulveda LR, Bull C, Jones JB.

Plant Dis. 2018 Apr;102(4):799-806. doi: 10.1094/PDIS-04-17-0505-RE. Epub 2018 Feb 2.

PMID:
30673405
7.

Excitation-Energy-Dependent Molecular Beacon Detects Early Stage Neurotoxic Aβ Aggregates in the Presence of Cortical Neurons.

Gulácsy CE, Meade R, Catici DAM, Soeller C, Pantos GD, Jones DD, Alibhai D, Jepson M, Valev VK, Mason JM, Williams RJ, Pudney CR.

ACS Chem Neurosci. 2019 Mar 20;10(3):1240-1250. doi: 10.1021/acschemneuro.8b00322. Epub 2018 Nov 21.

PMID:
30346718
8.

The futility of fertility research? Barriers to embryo research in New Zealand.

Goodman L, Cree L, Jones DDG, Legge M, Shelling A, Farquhar C.

N Z Med J. 2018 Jun 22;131(1477):63-70.

PMID:
29927917
9.

Impact of scribe utilization on resident education and fatigue mitigation.

Jones DD, Thompson MS, Colletti JE, Heaton HA.

Am J Emerg Med. 2018 Oct;36(10):1905-1906. doi: 10.1016/j.ajem.2018.02.028. Epub 2018 Mar 6. No abstract available.

PMID:
29525477
10.

Commensal Microbes Induce Serum IgA Responses that Protect against Polymicrobial Sepsis.

Wilmore JR, Gaudette BT, Gomez Atria D, Hashemi T, Jones DD, Gardner CA, Cole SD, Misic AM, Beiting DP, Allman D.

Cell Host Microbe. 2018 Mar 14;23(3):302-311.e3. doi: 10.1016/j.chom.2018.01.005. Epub 2018 Feb 22.

11.

Approaches to single-molecule studies of metalloprotein electron transfer using scanning probe-based techniques.

Elliott M, Jones DD.

Biochem Soc Trans. 2018 Feb 19;46(1):1-9. doi: 10.1042/BST20170229. Epub 2017 Dec 22. Review.

PMID:
29273619
12.

Site-Specific One-to-One Click Coupling of Single Proteins to Individual Carbon Nanotubes: A Single-Molecule Approach.

Freeley M, Worthy HL, Ahmed R, Bowen B, Watkins D, Macdonald JE, Zheng M, Jones DD, Palma M.

J Am Chem Soc. 2017 Dec 13;139(49):17834-17840. doi: 10.1021/jacs.7b07362. Epub 2017 Nov 29.

PMID:
29148737
13.

ΔFlucs: Brighter Photinus pyralis firefly luciferases identified by surveying consecutive single amino acid deletion mutations in a thermostable variant.

Halliwell LM, Jathoul AP, Bate JP, Worthy HL, Anderson JC, Jones DD, Murray JAH.

Biotechnol Bioeng. 2018 Jan;115(1):50-59. doi: 10.1002/bit.26451. Epub 2017 Oct 23.

PMID:
28921549
14.

Protocol for improved resolution of plasma cell subpopulations by flow cytometry.

Wilmore JR, Jones DD, Allman D.

Eur J Immunol. 2017 Aug;47(8):1386-1388. doi: 10.1002/eji.201746944.

15.

Heaton et al. Reply to Rich.

Heaton HA, Nestler DM, Jones DD, Varghese RS, Lohse CM, Williamson ES, Sadosty AT.

J Emerg Med. 2017 Aug;53(2):272. doi: 10.1016/j.jemermed.2017.04.005. Epub 2017 Jun 23. No abstract available.

PMID:
28651955
16.

Molecular basis for functional switching of GFP by two disparate non-native post-translational modifications of a phenyl azide reaction handle.

Hartley AM, Worthy HL, Reddington SC, Rizkallah PJ, Jones DD.

Chem Sci. 2016 Oct 1;7(10):6484-6491. doi: 10.1039/c6sc00944a. Epub 2016 Jun 29.

17.

Precision Templated Bottom-Up Multiprotein Nanoassembly through Defined Click Chemistry Linkage to DNA.

Marth G, Hartley AM, Reddington SC, Sargisson LL, Parcollet M, Dunn KE, Jones DD, Stulz E.

ACS Nano. 2017 May 23;11(5):5003-5010. doi: 10.1021/acsnano.7b01711. Epub 2017 Apr 20.

18.

Retraction of "Orientation-Dependent Electron Transport in a Single Redox Protein".

Della Pia EA, Elliott M, Jones DD, Macdonald JE.

ACS Nano. 2017 Mar 28;11(3):3421. doi: 10.1021/acsnano.6b06727. Epub 2017 Feb 17. No abstract available.

PMID:
28209052
19.

Impact of Scribes on Billed Relative Value Units in an Academic Emergency Department.

Heaton HA, Nestler DM, Jones DD, Varghese RS, Lohse CM, Williamson ES, Sadosty AT.

J Emerg Med. 2017 Mar;52(3):370-376. doi: 10.1016/j.jemermed.2016.11.017. Epub 2016 Dec 14.

PMID:
27988262
20.

mTOR has distinct functions in generating versus sustaining humoral immunity.

Jones DD, Gaudette BT, Wilmore JR, Chernova I, Bortnick A, Weiss BM, Allman D.

J Clin Invest. 2016 Nov 1;126(11):4250-4261. doi: 10.1172/JCI86504. Epub 2016 Oct 17.

21.

Impact of scribes on patient throughput in adult and pediatric academic EDs.

Heaton HA, Nestler DM, Jones DD, Lohse CM, Goyal DG, Kallis JS, Sadosty AT.

Am J Emerg Med. 2016 Oct;34(10):1982-1985. doi: 10.1016/j.ajem.2016.07.011. Epub 2016 Jul 8.

PMID:
27450391
22.

Identification of secreted and membrane-bound bat immunoglobulin using a Microchiropteran-specific mouse monoclonal antibody.

Lee WT, Jones DD, Yates JL, Winslow GM, Davis AD, Rudd RJ, Barron CT, Cowan C.

Dev Comp Immunol. 2016 Dec;65:114-123. doi: 10.1016/j.dci.2016.06.024. Epub 2016 Jul 1.

PMID:
27377583
23.

Presentation and Medical Management of Fibrocartilaginous Embolism in the Emergency Department.

Jones DD, Watson RE, Heaton HA.

J Emerg Med. 2016 Sep;51(3):315-8. doi: 10.1016/j.jemermed.2016.05.049. Epub 2016 Jun 29.

PMID:
27372375
24.

Correction: Functional modulation and directed assembly of an enzyme through designed non-natural post-translation modification.

Hartley AM, Zaki AJ, McGarrity AR, Robert-Ansart C, Moskalenko AV, Jones GF, Craciun MF, Russo S, Elliott M, Macdonald JE, Jones DD.

Chem Sci. 2016 Jun 1;7(6):3936. doi: 10.1039/c6sc90025a. Epub 2016 Apr 21.

25.

Simultaneous determination of estrogens (ethinylestradiol and norgestimate) concentrations in human and bovine serum albumin by use of fluorescence spectroscopy and multivariate regression analysis.

Hordge LN, McDaniel KL, Jones DD Jr, Fakayode SO.

Talanta. 2016 May 15;152:401-9. doi: 10.1016/j.talanta.2016.02.034. Epub 2016 Feb 17.

PMID:
26992536
26.

Cellular Dynamics of Memory B Cell Populations: IgM+ and IgG+ Memory B Cells Persist Indefinitely as Quiescent Cells.

Jones DD, Wilmore JR, Allman D.

J Immunol. 2015 Nov 15;195(10):4753-9. doi: 10.4049/jimmunol.1501365. Epub 2015 Oct 5.

27.

Functional modulation and directed assembly of an enzyme through designed non-natural post-translation modification.

Hartley AM, Zaki AJ, McGarrity AR, Robert-Ansart C, Moskalenko AV, Jones GF, Craciun MF, Russo S, Elliott M, Macdonald JE, Jones DD.

Chem Sci. 2015 Jul 15;6(7):3712-3717. doi: 10.1039/c4sc03900a. Epub 2015 Mar 31. Erratum in: Chem Sci. 2016 Jun 1;7(6):3936.

28.

In-frame amber stop codon replacement mutagenesis for the directed evolution of proteins containing non-canonical amino acids: identification of residues open to bio-orthogonal modification.

Arpino JA, Baldwin AJ, McGarrity AR, Tippmann EM, Jones DD.

PLoS One. 2015 May 26;10(5):e0127504. doi: 10.1371/journal.pone.0127504. eCollection 2015.

29.

Cochlear neuropathy in human presbycusis: Confocal analysis of hidden hearing loss in post-mortem tissue.

Viana LM, O'Malley JT, Burgess BJ, Jones DD, Oliveira CA, Santos F, Merchant SN, Liberman LD, Liberman MC.

Hear Res. 2015 Sep;327:78-88. doi: 10.1016/j.heares.2015.04.014. Epub 2015 May 19.

30.

The omentum is a site of protective IgM production during intracellular bacterial infection.

Jones DD, Racine R, Wittmer ST, Harston L, Papillion AM, Dishaw LM, Randall TD, Woodland DL, Winslow GM.

Infect Immun. 2015 May;83(5):2139-47. doi: 10.1128/IAI.00295-15. Epub 2015 Mar 16.

31.

Directed evolution of GFP with non-natural amino acids identifies residues for augmenting and photoswitching fluorescence.

Reddington SC, Baldwin AJ, Thompson R, Brancale A, Tippmann EM, Jones DD.

Chem Sci. 2015 Feb 1;6(2):1159-1166. doi: 10.1039/c4sc02827a. Epub 2014 Nov 7.

32.

Lasting antibody responses are mediated by a combination of newly formed and established bone marrow plasma cells drawn from clonally distinct precursors.

Chernova I, Jones DD, Wilmore JR, Bortnick A, Yucel M, Hershberg U, Allman D.

J Immunol. 2014 Nov 15;193(10):4971-9. doi: 10.4049/jimmunol.1401264. Epub 2014 Oct 17.

33.

[Pore geometry optimization for an implantable artificial kidney].

Ostadfar A, Ravcz A, Jones DD, Izadi M.

Med Tekh. 2014 May-Jun;(3):37-40. Russian. No abstract available.

PMID:
25282844
34.

Structural and dynamic changes associated with beneficial engineered single-amino-acid deletion mutations in enhanced green fluorescent protein.

Arpino JA, Rizkallah PJ, Jones DD.

Acta Crystallogr D Biol Crystallogr. 2014 Aug;70(Pt 8):2152-62. doi: 10.1107/S139900471401267X. Epub 2014 Jul 25.

35.

Transposon-based approaches for generating novel molecular diversity during directed evolution.

Jones DD, Arpino JA, Baldwin AJ, Edmundson MC.

Methods Mol Biol. 2014;1179:159-72. doi: 10.1007/978-1-4939-1053-3_11.

PMID:
25055777
36.

Random single amino acid deletion sampling unveils structural tolerance and the benefits of helical registry shift on GFP folding and structure.

Arpino JA, Reddington SC, Halliwell LM, Rizkallah PJ, Jones DD.

Structure. 2014 Jun 10;22(6):889-98. doi: 10.1016/j.str.2014.03.014. Epub 2014 May 22.

37.

B cell activating factor inhibition impairs bacterial immunity by reducing T cell-independent IgM secretion.

Jones DD, Jones M, DeIulio GA, Racine R, MacNamara KC, Winslow GM.

Infect Immun. 2013 Dec;81(12):4490-7. doi: 10.1128/IAI.00998-13. Epub 2013 Sep 30.

38.

Genetically encoding phenyl azide chemistry: new uses and ideas for classical biochemistry.

Reddington S, Watson P, Rizkallah P, Tippmann E, Jones DD.

Biochem Soc Trans. 2013 Oct;41(5):1177-82. doi: 10.1042/BST20130094. Review.

PMID:
24059505
39.

Monopolar cautery and adverse effects on cochlear implants.

Jeyakumar A, Wilson M, Sorrel JE, McIntire JB, Jones DD, Brickman TM, Arriaga M.

JAMA Otolaryngol Head Neck Surg. 2013 Jul;139(7):694-7. doi: 10.1001/jamaoto.2013.3297.

PMID:
23788116
40.

Different photochemical events of a genetically encoded phenyl azide define and modulate GFP fluorescence.

Reddington SC, Rizkallah PJ, Watson PD, Pearson R, Tippmann EM, Jones DD.

Angew Chem Int Ed Engl. 2013 Jun 3;52(23):5974-7. doi: 10.1002/anie.201301490. Epub 2013 Apr 25.

PMID:
23620472
41.

Aryl azide photochemistry in defined protein environments.

Morris JL, Reddington SC, Murphy DM, Jones DD, Platts JA, Tippmann EM.

Org Lett. 2013 Feb 15;15(4):728-31. doi: 10.1021/ol3028779. Epub 2013 Jan 25.

PMID:
23351055
42.

Crystal structure of enhanced green fluorescent protein to 1.35 Å resolution reveals alternative conformations for Glu222.

Arpino JA, Rizkallah PJ, Jones DD.

PLoS One. 2012;7(10):e47132. doi: 10.1371/journal.pone.0047132. Epub 2012 Oct 16.

43.

Fast electron transfer through a single molecule natively structured redox protein.

Della Pia EA, Chi Q, Macdonald JE, Ulstrup J, Jones DD, Elliott M.

Nanoscale. 2012 Nov 21;4(22):7106-13. doi: 10.1039/c2nr32131a.

PMID:
23069929
44.

Redox tuning of cytochrome b562 through facile metal porphyrin substitution.

Della Pia EA, Chi Q, Elliott M, Macdonald JE, Ulstrup J, Jones DD.

Chem Commun (Camb). 2012 Nov 7;48(86):10624-6. doi: 10.1039/c2cc34302a.

PMID:
22992595
45.

Structural basis for efficient chromophore communication and energy transfer in a constructed didomain protein scaffold.

Arpino JA, Czapinska H, Piasecka A, Edwards WR, Barker P, Gajda MJ, Bochtler M, Jones DD.

J Am Chem Soc. 2012 Aug 22;134(33):13632-40. doi: 10.1021/ja301987h. Epub 2012 Aug 9.

PMID:
22822710
46.

Residue choice defines efficiency and influence of bioorthogonal protein modification via genetically encoded strain promoted Click chemistry.

Reddington SC, Tippmann EM, Jones DD.

Chem Commun (Camb). 2012 Aug 28;48(67):8419-21. doi: 10.1039/c2cc31887c. Epub 2012 Jul 17.

PMID:
22801454
47.

Thermogravimetric characterization of dairy manure as pyrolysis and combustion feedstocks.

Wu H, Hanna MA, Jones DD.

Waste Manag Res. 2012 Oct;30(10):1066-71. doi: 10.1177/0734242X12452906. Epub 2012 Jul 5.

PMID:
22767875
48.

Antigen-driven induction of polyreactive IgM during intracellular bacterial infection.

Jones DD, DeIulio GA, Winslow GM.

J Immunol. 2012 Aug 1;189(3):1440-7. doi: 10.4049/jimmunol.1200878. Epub 2012 Jun 22.

49.

Direct binding of a redox protein for single-molecule electron transfer measurements.

Della Pia EA, Macdonald JE, Elliott M, Jones DD.

Small. 2012 Aug 6;8(15):2341-4. doi: 10.1002/smll.201102416. Epub 2012 May 2.

PMID:
22549892
50.

The role of substrate specificity and metal binding in defining the activity and structure of an intracellular subtilisin.

Gamble M, Künze G, Brancale A, Wilson KS, Jones DD.

FEBS Open Bio. 2012 Jul 20;2:209-15. doi: 10.1016/j.fob.2012.07.001. Print 2012.

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