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Items: 1 to 50 of 547

1.

A 4-d Water Intake Intervention Increases Hydration and Cognitive Flexibility among Preadolescent Children.

Khan NA, Westfall DR, Jones AR, Sinn MA, Bottin JH, Perrier ET, Hillman CH.

J Nutr. 2019 Sep 2. pii: nxz206. doi: 10.1093/jn/nxz206. [Epub ahead of print]

PMID:
31504690
2.

VAPPER: High-throughput variant antigen profiling in African trypanosomes of livestock.

Silva Pereira S, Heap J, Jones AR, Jackson AP.

Gigascience. 2019 Sep 1;8(9). pii: giz091. doi: 10.1093/gigascience/giz091.

3.

Conserved cell types with divergent features in human versus mouse cortex.

Hodge RD, Bakken TE, Miller JA, Smith KA, Barkan ER, Graybuck LT, Close JL, Long B, Johansen N, Penn O, Yao Z, Eggermont J, Höllt T, Levi BP, Shehata SI, Aevermann B, Beller A, Bertagnolli D, Brouner K, Casper T, Cobbs C, Dalley R, Dee N, Ding SL, Ellenbogen RG, Fong O, Garren E, Goldy J, Gwinn RP, Hirschstein D, Keene CD, Keshk M, Ko AL, Lathia K, Mahfouz A, Maltzer Z, McGraw M, Nguyen TN, Nyhus J, Ojemann JG, Oldre A, Parry S, Reynolds S, Rimorin C, Shapovalova NV, Somasundaram S, Szafer A, Thomsen ER, Tieu M, Quon G, Scheuermann RH, Yuste R, Sunkin SM, Lelieveldt B, Feng D, Ng L, Bernard A, Hawrylycz M, Phillips JW, Tasic B, Zeng H, Jones AR, Koch C, Lein ES.

Nature. 2019 Sep;573(7772):61-68. doi: 10.1038/s41586-019-1506-7. Epub 2019 Aug 21.

PMID:
31435019
4.

Strong anion exchange-mediated phosphoproteomics reveals extensive human non-canonical phosphorylation.

Hardman G, Perkins S, Brownridge PJ, Clarke CJ, Byrne DP, Campbell AE, Kalyuzhnyy A, Myall A, Eyers PA, Jones AR, Eyers CE.

EMBO J. 2019 Aug 21:e100847. doi: 10.15252/embj.2018100847. [Epub ahead of print]

5.

Fatty Acid Metabolites Combine with Reduced β Oxidation to Activate Th17 Inflammation in Human Type 2 Diabetes.

Nicholas DA, Proctor EA, Agrawal M, Belkina AC, Van Nostrand SC, Panneerseelan-Bharath L, Jones AR 4th, Raval F, Ip BC, Zhu M, Cacicedo JM, Habib C, Sainz-Rueda N, Persky L, Sullivan PG, Corkey BE, Apovian CM, Kern PA, Lauffenburger DA, Nikolajczyk BS.

Cell Metab. 2019 Sep 3;30(3):447-461.e5. doi: 10.1016/j.cmet.2019.07.004. Epub 2019 Aug 1.

PMID:
31378464
6.

C9orf72 intermediate expansions of 24-30 repeats are associated with ALS.

Iacoangeli A, Al Khleifat A, Jones AR, Sproviero W, Shatunov A, Opie-Martin S; Alzheimer’s Disease Neuroimaging Initiative, Morrison KE, Shaw PJ, Shaw CE, Fogh I, Dobson RJ, Newhouse SJ, Al-Chalabi A.

Acta Neuropathol Commun. 2019 Jul 17;7(1):115. doi: 10.1186/s40478-019-0724-4.

7.

Evaluation of "Stop the Bleed" training among K-12 faculty and staff in Alabama.

Jones AR, Brown MR, Esslinger A, Strickland VS, Kerby JD.

Public Health Nurs. 2019 Jul 11. doi: 10.1111/phn.12638. [Epub ahead of print]

PMID:
31294864
8.

The effects of the neonicotinoid imidacloprid on gene expression and DNA methylation in the buff-tailed bumblebee Bombus terrestris.

Bebane PSA, Hunt BJ, Pegoraro M, Jones ARC, Marshall H, Rosato E, Mallon EB.

Proc Biol Sci. 2019 Jun 26;286(1905):20190718. doi: 10.1098/rspb.2019.0718. Epub 2019 Jun 19.

PMID:
31213186
9.

Lineup fairness: propitious heterogeneity and the diagnostic feature-detection hypothesis.

Carlson CA, Jones AR, Whittington JE, Lockamyeir RF, Carlson MA, Wooten AR.

Cogn Res Princ Implic. 2019 Jun 13;4(1):20. doi: 10.1186/s41235-019-0172-5. Erratum in: Cogn Res Princ Implic. 2019 Aug 9;4(1):30.

10.

Photochemical Spin Dynamics of the Vitamin B12 Derivative, Methylcobalamin.

Lukinović V, Woodward JR, Marrafa TC, Shanmugam M, Heyes DJ, Hardman SJO, Scrutton NS, Hay S, Fielding AJ, Jones AR.

J Phys Chem B. 2019 Jun 6;123(22):4663-4672. doi: 10.1021/acs.jpcb.9b01969. Epub 2019 May 23.

PMID:
31081330
11.

Genome-wide survey of copy number variants finds MAPT duplications in progressive supranuclear palsy.

Chen Z, Chen JA, Shatunov A, Jones AR, Kravitz SN, Huang AY, Lawrence L, Lowe JK, Lewis CM, Payan CAM, Lieb W, Franke A, Deloukas P, Amouyel P, Tzourio C, Dartigues JF; NNIPPS and BBBIPPS Study Groups, Ludolph A, Bensimon G, Leigh PN, Bronstein JM, Coppola G, Geschwind DH, Al-Chalabi A.

Mov Disord. 2019 Jul;34(7):1049-1059. doi: 10.1002/mds.27702. Epub 2019 May 6.

PMID:
31059154
12.

Better Model Transfers Require Knowledge of Mechanisms.

Bouchet PJ, Peterson AT, Zurell D, Dormann CF, Schoeman D, Ross RE, Snelgrove P, Sequeira AMM, Whittingham MJ, Wang L, Rapacciuolo G, Oppel S, Mellin C, Lauria V, Krishnakumar PK, Jones AR, Heinänen S, Heikkinen RK, Gregr EJ, Fielding AH, Caley MJ, Barbosa AM, Bamford AJ, Lozano-Montes H, Parnell S, Wenger S, Yates KL.

Trends Ecol Evol. 2019 Jun;34(6):489-490. doi: 10.1016/j.tree.2019.04.006. Epub 2019 May 2. No abstract available.

PMID:
31054858
13.

Characterizing red blood cell age exposure in massive transfusion therapy: the scalar age of blood index (SBI).

DeSantis SM, Brown DW, Jones AR, Yamal JM, Pittet JF, Patel RP, Wade CE, Holcomb JB, Wang H; PROPPR Study Group.

Transfusion. 2019 Aug;59(8):2699-2708. doi: 10.1111/trf.15334. Epub 2019 May 3.

PMID:
31050809
14.

Evaluating spectral overlap with the degree of quenching in UCP luminescence energy transfer systems.

Burgess L, Jones AR, Hay S, Natrajan LS.

Methods Appl Fluoresc. 2019 May 16;7(3):034003. doi: 10.1088/2050-6120/ab1ee9.

PMID:
31048565
15.

DNAscan: personal computer compatible NGS analysis, annotation and visualisation.

Iacoangeli A, Al Khleifat A, Sproviero W, Shatunov A, Jones AR, Morgan SL, Pittman A, Dobson RJ, Newhouse SJ, Al-Chalabi A.

BMC Bioinformatics. 2019 Apr 27;20(1):213. doi: 10.1186/s12859-019-2791-8.

16.

Predicting the future of ALS: the impact of demographic change and potential new treatments on the prevalence of ALS in the United Kingdom, 2020-2116.

Gowland A, Opie-Martin S, Scott KM, Jones AR, Mehta PR, Batts CJ, Ellis CM, Leigh PN, Shaw CE, Sreedharan J, Al-Chalabi A.

Amyotroph Lateral Scler Frontotemporal Degener. 2019 May;20(3-4):264-274. doi: 10.1080/21678421.2019.1587629. Epub 2019 Apr 9.

17.

Telomere length is greater in ALS than in controls: a whole genome sequencing study.

Al Khleifat A, Iacoangeli A, Shatunov A, Fang T, Sproviero W, Jones AR, Opie-Martin S, Morrison KE, Shaw PJ, Shaw CE, Powell JF, Dobson R, Newhouse SJ, Al-Chalabi A.

Amyotroph Lateral Scler Frontotemporal Degener. 2019 May;20(3-4):229-234. doi: 10.1080/21678421.2019.1586951. Epub 2019 Apr 1.

18.

Use of non-contrast-enhanced computed tomography to identify deep digital flexor tendinopathy in horses with lameness: 28 cases (2014-2016).

Jones ARE, Ragle CA, Mattoon JS, Sanz MG.

J Am Vet Med Assoc. 2019 Apr 1;254(7):852-858. doi: 10.2460/javma.254.7.852.

PMID:
30888281
19.

A Standing Percutaneous Technique for Proximal Interphalangeal Joint Arthrodesis in Twelve Horses (2014-2017).

Heaton K, Farnsworth KD, Souza CRS, Jones ARE.

Vet Comp Orthop Traumatol. 2019 Mar;32(2):165-170. doi: 10.1055/s-0039-1677747. Epub 2019 Mar 7.

PMID:
30847872
20.

Improving Transition to Practice: Integration of Advanced Cardiac Life Support Into a Baccalaureate Nursing Program.

Powers S, Claus N, Jones AR, Lovelace MR, Weaver K, Watts P.

J Nurs Educ. 2019 Mar 1;58(3):182-184. doi: 10.3928/01484834-20190221-11.

PMID:
30835808
21.

ALSgeneScanner: a pipeline for the analysis and interpretation of DNA sequencing data of ALS patients.

Iacoangeli A, Al Khleifat A, Sproviero W, Shatunov A, Jones AR, Opie-Martin S, Naselli E, Topp SD, Fogh I, Hodges A, Dobson RJ, Newhouse SJ, Al-Chalabi A.

Amyotroph Lateral Scler Frontotemporal Degener. 2019 May;20(3-4):207-215. doi: 10.1080/21678421.2018.1562553. Epub 2019 Mar 5.

22.

SGLT2 Inhibitors Increase the Risk of Diabetic Ketoacidosis Developing in the Community and During Hospital Admission.

Hamblin PS, Wong R, Ekinci EI, Fourlanos S, Shah S, Jones AR, Hare MJL, Calder GL, Epa DS, George EM, Giri R, Kotowicz MA, Kyi M, Lafontaine N, MacIsaac RJ, Nolan BJ, O'Neal DN, Renouf D, Varadarajan S, Wong J, Xu S, Bach LA.

J Clin Endocrinol Metab. 2019 Aug 1;104(8):3077-3087. doi: 10.1210/jc.2019-00139.

PMID:
30835263
23.

Cell size and cell cycle progression: the cyclin-dependent kinase link in green algae.

Jones AR, Dewitte W.

J Exp Bot. 2019 Feb 5;70(3):731-733. doi: 10.1093/jxb/erz008. No abstract available.

24.

mzTab-M: A Data Standard for Sharing Quantitative Results in Mass Spectrometry Metabolomics.

Hoffmann N, Rein J, Sachsenberg T, Hartler J, Haug K, Mayer G, Alka O, Dayalan S, Pearce JTM, Rocca-Serra P, Qi D, Eisenacher M, Perez-Riverol Y, Vizcaíno JA, Salek RM, Neumann S, Jones AR.

Anal Chem. 2019 Mar 5;91(5):3302-3310. doi: 10.1021/acs.analchem.8b04310. Epub 2019 Feb 13.

25.

Retinal Morphometric Markers of Crystallized and Fluid Intelligence Among Adults With Overweight and Obesity.

Jones AR, Robbs CM, Edwards CG, Walk AM, Thompson SV, Reeser GE, Holscher HD, Khan NA.

Front Psychol. 2018 Dec 21;9:2650. doi: 10.3389/fpsyg.2018.02650. eCollection 2018.

26.

Native mass spectrometry reveals the conformational diversity of the UVR8 photoreceptor.

Camacho IS, Theisen A, Johannissen LO, Díaz-Ramos LA, Christie JM, Jenkins GI, Bellina B, Barran P, Jones AR.

Proc Natl Acad Sci U S A. 2019 Jan 22;116(4):1116-1125. doi: 10.1073/pnas.1813254116. Epub 2019 Jan 4.

27.

A comparison of response in the presence or absence of a delay in induction therapy with bortezomib, lenalidomide, and dexamethasone.

Schepers AJ, Jones AR, Reeves BN, Tuchman SA, Bates JS.

J Oncol Pharm Pract. 2019 Oct;25(7):1692-1698. doi: 10.1177/1078155218815283. Epub 2018 Nov 30.

PMID:
30501382
28.

Early career biomedical grantsmanship self-efficacy: validation of an abbreviated self-assessment tool.

Harwood EM, Jones AR, Erickson D, Buchwald D, Johnson-Hemming J, Jones HP, Manson S, McGee R, Smith A, Steer CJ, Vishwanatha JK, Weber-Main AM, Okuyemi KS.

Ann N Y Acad Sci. 2019 Jun;1445(1):17-26. doi: 10.1111/nyas.13995. Epub 2018 Dec 5.

PMID:
30515830
29.

A minimally invasive surgical technique for ureteral ostioplasty in two fillies with ureteral ectopia.

Jones ARE, Ragle CA.

J Am Vet Med Assoc. 2018 Dec 1;253(11):1467-1472. doi: 10.2460/javma.253.11.1467.

PMID:
30451615
30.

Older Blood Is Associated With Increased Mortality and Adverse Events in Massively Transfused Trauma Patients: Secondary Analysis of the PROPPR Trial.

Jones AR, Patel RP, Marques MB, Donnelly JP, Griffin RL, Pittet JF, Kerby JD, Stephens SW, DeSantis SM, Hess JR, Wang HE; PROPPR Study Group.

Ann Emerg Med. 2019 Jun;73(6):650-661. doi: 10.1016/j.annemergmed.2018.09.033. Epub 2018 Nov 15.

PMID:
30447946
31.

Shared and distinct transcriptomic cell types across neocortical areas.

Tasic B, Yao Z, Graybuck LT, Smith KA, Nguyen TN, Bertagnolli D, Goldy J, Garren E, Economo MN, Viswanathan S, Penn O, Bakken T, Menon V, Miller J, Fong O, Hirokawa KE, Lathia K, Rimorin C, Tieu M, Larsen R, Casper T, Barkan E, Kroll M, Parry S, Shapovalova NV, Hirschstein D, Pendergraft J, Sullivan HA, Kim TK, Szafer A, Dee N, Groblewski P, Wickersham I, Cetin A, Harris JA, Levi BP, Sunkin SM, Madisen L, Daigle TL, Looger L, Bernard A, Phillips J, Lein E, Hawrylycz M, Svoboda K, Jones AR, Koch C, Zeng H.

Nature. 2018 Nov;563(7729):72-78. doi: 10.1038/s41586-018-0654-5. Epub 2018 Oct 31.

32.

Improvements to the Rice Genome Annotation Through Large-Scale Analysis of RNA-Seq and Proteomics Data Sets.

Ren Z, Qi D, Pugh N, Li K, Wen B, Zhou R, Xu S, Liu S, Jones AR.

Mol Cell Proteomics. 2019 Jan;18(1):86-98. doi: 10.1074/mcp.RA118.000832. Epub 2018 Oct 6.

33.
34.

Younger age of onset in familial amyotrophic lateral sclerosis is a result of pathogenic gene variants, rather than ascertainment bias.

Mehta PR, Jones AR, Opie-Martin S, Shatunov A, Iacoangeli A, Al Khleifat A, Smith BN, Topp S, Morrison KE, Shaw PJ, Shaw CE, Morgan S, Pittman A, Al-Chalabi A.

J Neurol Neurosurg Psychiatry. 2019 Mar;90(3):268-271. doi: 10.1136/jnnp-2018-319089. Epub 2018 Sep 30.

35.

Outstanding Challenges in the Transferability of Ecological Models.

Yates KL, Bouchet PJ, Caley MJ, Mengersen K, Randin CF, Parnell S, Fielding AH, Bamford AJ, Ban S, Barbosa AM, Dormann CF, Elith J, Embling CB, Ervin GN, Fisher R, Gould S, Graf RF, Gregr EJ, Halpin PN, Heikkinen RK, Heinänen S, Jones AR, Krishnakumar PK, Lauria V, Lozano-Montes H, Mannocci L, Mellin C, Mesgaran MB, Moreno-Amat E, Mormede S, Novaczek E, Oppel S, Ortuño Crespo G, Peterson AT, Rapacciuolo G, Roberts JJ, Ross RE, Scales KL, Schoeman D, Snelgrove P, Sundblad G, Thuiller W, Torres LG, Verbruggen H, Wang L, Wenger S, Whittingham MJ, Zharikov Y, Zurell D, Sequeira AMM.

Trends Ecol Evol. 2018 Oct;33(10):790-802. doi: 10.1016/j.tree.2018.08.001. Epub 2018 Aug 27. Review.

36.

Critical assessment of approaches for molecular docking to elucidate associations of HLA alleles with adverse drug reactions.

Ramsbottom KA, Carr DF, Jones AR, Rigden DJ.

Mol Immunol. 2018 Sep;101:488-499. doi: 10.1016/j.molimm.2018.08.003. Epub 2018 Aug 18.

37.

Does pre-operative anxiety and/or depression affect patient outcome after primary knee replacement arthroplasty?

Jones AR, Al-Naseer S, Bodger O, James ETR, Davies AP.

Knee. 2018 Dec;25(6):1238-1246. doi: 10.1016/j.knee.2018.07.011. Epub 2018 Aug 16.

PMID:
30121151
38.

Joint genome-wide association study of progressive supranuclear palsy identifies novel susceptibility loci and genetic correlation to neurodegenerative diseases.

Chen JA, Chen Z, Won H, Huang AY, Lowe JK, Wojta K, Yokoyama JS, Bensimon G, Leigh PN, Payan C, Shatunov A, Jones AR, Lewis CM, Deloukas P, Amouyel P, Tzourio C, Dartigues JF, Ludolph A, Boxer AL, Bronstein JM, Al-Chalabi A, Geschwind DH, Coppola G.

Mol Neurodegener. 2018 Aug 8;13(1):41. doi: 10.1186/s13024-018-0270-8.

39.

The scourge of the C.

Jones AR, Kumareswaran K.

Med J Aust. 2018 Jul 16;209(2):62-63. No abstract available.

PMID:
29996751
40.

Functional acclimation across microgeographic scales in Dodonaea viscosa.

Baruch Z, Jones AR, Hill KE, McInerney FA, Blyth C, Caddy-Retalic S, Christmas MJ, Gellie NJC, Lowe AJ, Martin-Fores I, Nielson KE, Breed MF.

AoB Plants. 2018 May 11;10(3):ply029. doi: 10.1093/aobpla/ply029. eCollection 2018 Jun.

41.

Two photon spectroscopy and microscopy of the fluorescent flavoprotein, iLOV.

Homans RJ, Khan RU, Andrews MB, Kjeldsen AE, Natrajan LS, Marsden S, McKenzie EA, Christie JM, Jones AR.

Phys Chem Chem Phys. 2018 Jun 27;20(25):16949-16955. doi: 10.1039/c8cp01699b.

PMID:
29873653
42.

Allele Frequency Net Database.

Gonzalez-Galarza FF, McCabe A, Melo Dos Santos EJ, Takeshita L, Ghattaoraya G, Jones AR, Middleton D.

Methods Mol Biol. 2018;1802:49-62. doi: 10.1007/978-1-4939-8546-3_4.

PMID:
29858801
43.

Chromosomally Encoded mcr-5 in Colistin-Nonsusceptible Pseudomonas aeruginosa.

Snesrud E, Maybank R, Kwak YI, Jones AR, Hinkle MK, McGann P.

Antimicrob Agents Chemother. 2018 Jul 27;62(8). pii: e00679-18. doi: 10.1128/AAC.00679-18. Print 2018 Aug.

44.

Comparative qualitative phosphoproteomics analysis identifies shared phosphorylation motifs and associated biological processes in evolutionary divergent plants.

Al-Momani S, Qi D, Ren Z, Jones AR.

J Proteomics. 2018 Jun 15;181:152-159. doi: 10.1016/j.jprot.2018.04.011. Epub 2018 Apr 11.

45.

A Green-Light-Responsive System for the Control of Transgene Expression in Mammalian and Plant Cells.

Chatelle C, Ochoa-Fernandez R, Engesser R, Schneider N, Beyer HM, Jones AR, Timmer J, Zurbriggen MD, Weber W.

ACS Synth Biol. 2018 May 18;7(5):1349-1358. doi: 10.1021/acssynbio.7b00450. Epub 2018 Apr 19.

PMID:
29634242
46.

Macular Xanthophylls Are Related to Intellectual Ability among Adults with Overweight and Obesity.

Khan NA, Walk AM, Edwards CG, Jones AR, Cannavale CN, Thompson SV, Reeser GE, Holscher HD.

Nutrients. 2018 Mar 23;10(4). pii: E396. doi: 10.3390/nu10040396.

47.

Difficulties in cerebrospinal fluid βhCG interpretation in a patient with an infundibular lesion.

Jones AR, McNeil A, Yates C, Krishnamurthy B, Hamblin PS.

Endocrinol Diabetes Metab Case Rep. 2018 Feb 23;2018. pii: 17-0168. doi: 10.1530/EDM-17-0168. eCollection 2018.

48.

A remotely triggered fast neutron detection instrument based on a plastic organic scintillator.

Jones AR, Aspinall MD, Joyce MJ.

Rev Sci Instrum. 2018 Feb;89(2):023115. doi: 10.1063/1.5012121.

PMID:
29495805
49.

phpMs: A PHP-Based Mass Spectrometry Utilities Library.

Collins A, Jones AR.

J Proteome Res. 2018 Mar 2;17(3):1309-1313. doi: 10.1021/acs.jproteome.7b00783. Epub 2018 Feb 13.

PMID:
29400473
50.

The proBAM and proBed standard formats: enabling a seamless integration of genomics and proteomics data.

Menschaert G, Wang X, Jones AR, Ghali F, Fenyö D, Olexiouk V, Zhang B, Deutsch EW, Ternent T, Vizcaíno JA.

Genome Biol. 2018 Jan 31;19(1):12. doi: 10.1186/s13059-017-1377-x.

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