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Items: 1 to 50 of 113

1.

In vivo exposure of insect AMP resistant Staphylococcus aureus to an insect immune system.

El Shazely B, Urbański A, Johnston PR, Rolff J.

Insect Biochem Mol Biol. 2019 Jul;110:60-68. doi: 10.1016/j.ibmb.2019.04.017. Epub 2019 Apr 30.

PMID:
31051236
2.

Overview of Phacidiales, including Aotearoamyces gen. nov. on Nothofagus.

Quijada L, Johnston PR, Cooper JA, Pfister DH.

IMA Fungus. 2018 Jul;9:371-382. doi: 10.5598/imafungus.2018.09.02.08. Epub 2018 Oct 30.

3.

Experimental infection with Anguillicola crassus alters immune gene expression in both spleen and head kidney of the European eel (Anguilla anguilla).

Bracamonte SE, Johnston PR, Knopf K, Monaghan MT.

Mar Genomics. 2019 Jun;45:28-37. doi: 10.1016/j.margen.2018.12.002. Epub 2019 Jan 5.

PMID:
30616929
4.

Subperiosteal new bone formation with the distal tibial classic metaphyseal lesion: prevalence on radiographic skeletal surveys.

Tsai A, Connolly SA, Ecklund K, Johnston PR, Kleinman PK.

Pediatr Radiol. 2019 Apr;49(4):551-558. doi: 10.1007/s00247-018-4329-z. Epub 2019 Jan 4.

PMID:
30607436
5.

Daphnia galeata responds to the exposure to an ichthyosporean gut parasite by down-regulation of immunity and lipid metabolism.

Lu Y, Johnston PR, Dennis SR, Monaghan MT, John U, Spaak P, Wolinska J.

BMC Genomics. 2018 Dec 14;19(1):932. doi: 10.1186/s12864-018-5312-7.

6.

Accuracy of electrocardiographic imaging using the method of fundamental solutions.

Johnston PR.

Comput Biol Med. 2018 Nov 1;102:433-448. doi: 10.1016/j.compbiomed.2018.09.016. Epub 2018 Sep 29.

PMID:
30309613
7.

Sensitivity analysis of ST-segment epicardial potentials arising from changes in ischaemic region conductivities in early and late stage ischaemia.

Johnston BM, Johnston PR.

Comput Biol Med. 2018 Nov 1;102:288-299. doi: 10.1016/j.compbiomed.2018.06.005. Epub 2018 Jun 15.

PMID:
29914695
8.

Import volumes and biosecurity interventions shape the arrival rate of fungal pathogens.

Sikes BA, Bufford JL, Hulme PE, Cooper JA, Johnston PR, Duncan RP.

PLoS Biol. 2018 May 31;16(5):e2006025. doi: 10.1371/journal.pbio.2006025. eCollection 2018 May.

9.

Termite soldiers contribute to social immunity by synthesizing potent oral secretions.

He S, Johnston PR, Kuropka B, Lokatis S, Weise C, Plarre R, Kunte HJ, McMahon DP.

Insect Mol Biol. 2018 Oct;27(5):564-576. doi: 10.1111/imb.12499. Epub 2018 Jul 24.

PMID:
29663551
10.

The distal tibial classic metaphyseal lesion: medial versus lateral cortical injury.

Tsai A, Johnston PR, Perez-Rossello JM, Breen MA, Kleinman PK.

Pediatr Radiol. 2018 Jul;48(7):973-978. doi: 10.1007/s00247-018-4103-2. Epub 2018 Mar 14.

PMID:
29541806
11.

Determining the most significant input parameters in models of subendocardial ischaemia and their effect on ST segment epicardial potential distributions.

Johnston BM, Johnston PR.

Comput Biol Med. 2018 Apr 1;95:75-89. doi: 10.1016/j.compbiomed.2018.02.003. Epub 2018 Feb 10.

PMID:
29459293
12.

Simultaneous multi-slice accelerated turbo spin echo of the knee in pediatric patients.

Benali S, Johnston PR, Gholipour A, Dugan ME, Heberlein K, Bhat H, Bixby SD.

Skeletal Radiol. 2018 Jun;47(6):821-831. doi: 10.1007/s00256-017-2868-2. Epub 2018 Jan 13.

PMID:
29332200
13.

Multiparametric Analysis of Permeability and ADC Histogram Metrics for Classification of Pediatric Brain Tumors by Tumor Grade.

Vajapeyam S, Brown D, Johnston PR, Ricci KI, Kieran MW, Lidov HGW, Poussaint TY.

AJNR Am J Neuroradiol. 2018 Mar;39(3):552-557. doi: 10.3174/ajnr.A5502. Epub 2018 Jan 4.

14.

Phylogenetic relationships of eight new Dacrymycetes collected from New Zealand.

Shirouzu T, Hosaka K, Nam KO, Weir BS, Johnston PR, Hosoya T.

Persoonia. 2017 Jun;38:156-169. doi: 10.3767/003158517X695280. Epub 2017 Mar 8.

15.

Comparing diversity of fungi from living leaves using culturing and high-throughput environmental sequencing.

Johnston PR, Park D, Smissen RD.

Mycologia. 2017 Jul-Aug;109(4):643-654. doi: 10.1080/00275514.2017.1384712. Epub 2017 Nov 15.

PMID:
29140754
16.

Quantifying the effect of uncertainty in input parameters in a simplified bidomain model of partial thickness ischaemia.

Johnston BM, Coveney S, Chang ETY, Johnston PR, Clayton RH.

Med Biol Eng Comput. 2018 May;56(5):761-780. doi: 10.1007/s11517-017-1714-y. Epub 2017 Sep 20.

17.

Evolution of defence cocktails: Antimicrobial peptide combinations reduce mortality and persistent infection.

Zanchi C, Johnston PR, Rolff J.

Mol Ecol. 2017 Oct;26(19):5334-5343. doi: 10.1111/mec.14267. Epub 2017 Aug 30.

PMID:
28762573
18.

The effect of boundary conditions on epicardial potential distributions.

Barnes JP, Johnston PR.

Comput Methods Biomech Biomed Engin. 2017 Aug;20(10):1031-1037. doi: 10.1080/10255842.2017.1327578. Epub 2017 May 19.

PMID:
28521515
19.

Transcriptome profiling of ontogeny in the acridid grasshopper Chorthippus biguttulus.

Berdan EL, Finck J, Johnston PR, Waurick I, Mazzoni CJ, Mayer F.

PLoS One. 2017 May 17;12(5):e0177367. doi: 10.1371/journal.pone.0177367. eCollection 2017.

20.

Response to the letter by Guogen Shan and Hua Zhang (response to letter commenting: J Clin Epidemiol. 2015;68:733-739).

Borkhoff CM, Johnston PR, Stephens D, Atenafu E.

J Clin Epidemiol. 2017 Apr;84:190-191. doi: 10.1016/j.jclinepi.2016.12.005. Epub 2017 Jan 4. No abstract available.

PMID:
28063916
21.

Fusarium praegraminearum sp. nov., a novel nivalenol mycotoxin-producing pathogen from New Zealand can induce head blight on wheat.

Gräfenhan T, Johnston PR, Vaughan MM, McCormick SP, Proctor RH, Busman M, Ward TJ, O'Donnell K.

Mycologia. 2016 Nov/Dec;108(6):1229-1239. doi: 10.3852/16-110.

PMID:
27621289
22.

Taxonomic similarity, more than contact opportunity, explains novel plant-pathogen associations between native and alien taxa.

Bufford JL, Hulme PE, Sikes BA, Cooper JA, Johnston PR, Duncan RP.

New Phytol. 2016 Nov;212(3):657-667. doi: 10.1111/nph.14077. Epub 2016 Jul 21.

23.

Genomic Signatures of Experimental Adaptation to Antimicrobial Peptides in Staphylococcus aureus.

Johnston PR, Dobson AJ, Rolff J.

G3 (Bethesda). 2016 Jun 1;6(6):1535-9. doi: 10.1534/g3.115.023622.

24.

Applying the stochastic Galerkin method to epidemic models with uncertainty in the parameters.

Harman DB, Johnston PR.

Math Biosci. 2016 Jul;277:25-37. doi: 10.1016/j.mbs.2016.03.012. Epub 2016 Apr 14.

PMID:
27091743
25.

Unique features of a global human ectoparasite identified through sequencing of the bed bug genome.

Benoit JB, Adelman ZN, Reinhardt K, Dolan A, Poelchau M, Jennings EC, Szuter EM, Hagan RW, Gujar H, Shukla JN, Zhu F, Mohan M, Nelson DR, Rosendale AJ, Derst C, Resnik V, Wernig S, Menegazzi P, Wegener C, Peschel N, Hendershot JM, Blenau W, Predel R, Johnston PR, Ioannidis P, Waterhouse RM, Nauen R, Schorn C, Ott MC, Maiwald F, Johnston JS, Gondhalekar AD, Scharf ME, Peterson BF, Raje KR, Hottel BA, Armisén D, Crumière AJJ, Refki PN, Santos ME, Sghaier E, Viala S, Khila A, Ahn SJ, Childers C, Lee CY, Lin H, Hughes DST, Duncan EJ, Murali SC, Qu J, Dugan S, Lee SL, Chao H, Dinh H, Han Y, Doddapaneni H, Worley KC, Muzny DM, Wheeler D, Panfilio KA, Vargas Jentzsch IM, Vargo EL, Booth W, Friedrich M, Weirauch MT, Anderson MAE, Jones JW, Mittapalli O, Zhao C, Zhou JJ, Evans JD, Attardo GM, Robertson HM, Zdobnov EM, Ribeiro JMC, Gibbs RA, Werren JH, Palli SR, Schal C, Richards S.

Nat Commun. 2016 Feb 2;7:10165. doi: 10.1038/ncomms10165.

26.

Application of robust Generalised Cross-Validation to the inverse problem of electrocardiology.

Barnes JP, Johnston PR.

Comput Biol Med. 2016 Feb 1;69:213-25. doi: 10.1016/j.compbiomed.2015.12.011. Epub 2015 Dec 29.

PMID:
26773942
27.

Sex-specific gene expression in the mosquito Culex pipiens f. molestus in response to artificial light at night.

Honnen AC, Johnston PR, Monaghan MT.

BMC Genomics. 2016 Jan 5;17:22. doi: 10.1186/s12864-015-2336-0.

28.

Host and Symbiont Jointly Control Gut Microbiota during Complete Metamorphosis.

Johnston PR, Rolff J.

PLoS Pathog. 2015 Nov 6;11(11):e1005246. doi: 10.1371/journal.ppat.1005246. eCollection 2015.

29.

Harorepupu aotearoa (Onygenales) gen. sp. nov.; a threatened fungus from shells of Powelliphanta and Paryphanta snails (Rhytididae).

Johnston PR, Nguyen HD, Park D, Hirooka Y.

IMA Fungus. 2015 Jun;6(1):135-43. doi: 10.5598/imafungus.2015.06.01.08. Epub 2015 Jun 1.

30.

Determining six cardiac conductivities from realistically large datasets.

Johnston BM, Johnston PR.

Math Biosci. 2015 Aug;266:15-22. doi: 10.1016/j.mbs.2015.05.008. Epub 2015 Jun 3.

PMID:
26048188
31.

Fusarium dactylidis sp. nov., a novel nivalenol toxin-producing species sister to F. pseudograminearum isolated from orchard grass (Dactylis glomerata) in Oregon and New Zealand.

Aoki T, Vaughan MM, McCormick SP, Busman M, Ward TJ, Kelly A, O'Donnell K, Johnston PR, Geiser DM.

Mycologia. 2015 Mar-Apr;107(2):409-18. doi: 10.3852/14-213. Epub 2014 Dec 30.

PMID:
25550300
32.

The special case of the 2 × 2 table: asymptotic unconditional McNemar test can be used to estimate sample size even for analysis based on GEE.

Borkhoff CM, Johnston PR, Stephens D, Atenafu E.

J Clin Epidemiol. 2015 Jul;68(7):733-9. doi: 10.1016/j.jclinepi.2014.09.025. Epub 2014 Nov 13.

PMID:
25510372
33.

Vibrisseaceous fungi from the southern hemisphere, including Chlorovibrissea chilensis (Helotiales, incertaesedis) sp. nov.

Sandoval-Leiva P, Carmarán CC, Park D, Romero AI, Johnston PR.

Mycologia. 2014 Nov-Dec;106(6):1159-67. doi: 10.3852/14-009. Epub 2014 Aug 24.

PMID:
25152002
34.

Recommendations on generic names competing for use in Leotiomycetes (Ascomycota).

Johnston PR, Seifert KA, Stone JK, Rossman AY, Marvanová L.

IMA Fungus. 2014 Jun;5(1):91-120. doi: 10.5598/imafungus.2014.05.01.11. Epub 2014 Jun 18.

35.

Finding needles in haystacks: linking scientific names, reference specimens and molecular data for Fungi.

Schoch CL, Robbertse B, Robert V, Vu D, Cardinali G, Irinyi L, Meyer W, Nilsson RH, Hughes K, Miller AN, Kirk PM, Abarenkov K, Aime MC, Ariyawansa HA, Bidartondo M, Boekhout T, Buyck B, Cai Q, Chen J, Crespo A, Crous PW, Damm U, De Beer ZW, Dentinger BT, Divakar PK, Dueñas M, Feau N, Fliegerova K, García MA, Ge ZW, Griffith GW, Groenewald JZ, Groenewald M, Grube M, Gryzenhout M, Gueidan C, Guo L, Hambleton S, Hamelin R, Hansen K, Hofstetter V, Hong SB, Houbraken J, Hyde KD, Inderbitzin P, Johnston PR, Karunarathna SC, Kõljalg U, Kovács GM, Kraichak E, Krizsan K, Kurtzman CP, Larsson KH, Leavitt S, Letcher PM, Liimatainen K, Liu JK, Lodge DJ, Luangsa-ard JJ, Lumbsch HT, Maharachchikumbura SS, Manamgoda D, Martín MP, Minnis AM, Moncalvo JM, Mulè G, Nakasone KK, Niskanen T, Olariaga I, Papp T, Petkovits T, Pino-Bodas R, Powell MJ, Raja HA, Redecker D, Sarmiento-Ramirez JM, Seifert KA, Shrestha B, Stenroos S, Stielow B, Suh SO, Tanaka K, Tedersoo L, Telleria MT, Udayanga D, Untereiner WA, Diéguez Uribeondo J, Subbarao KV, Vágvölgyi C, Visagie C, Voigt K, Walker DM, Weir BS, Weiß M, Wijayawardene NN, Wingfield MJ, Xu JP, Yang ZL, Zhang N, Zhuang WY, Federhen S.

Database (Oxford). 2014 Jun 30;2014. pii: bau061. doi: 10.1093/database/bau061. Print 2014.

36.

Blink patterns and lid-contact times in dry-eye and normal subjects.

Ousler GW 3rd, Abelson MB, Johnston PR, Rodriguez J, Lane K, Smith LM.

Clin Ophthalmol. 2014 May 5;8:869-74. doi: 10.2147/OPTH.S56783. eCollection 2014.

37.

Inducible defenses stay up late: temporal patterns of immune gene expression in Tenebrio molitor.

Johnston PR, Makarova O, Rolff J.

G3 (Bethesda). 2013 Dec 6;4(6):947-55. doi: 10.1534/g3.113.008516.

38.

A multi-electrode array and inversion technique for retrieving six conductivities from heart potential measurements.

Johnston BM, Johnston PR.

Med Biol Eng Comput. 2013 Dec;51(12):1295-303. doi: 10.1007/s11517-013-1101-2. Epub 2013 Jul 28.

PMID:
23892890
39.

Automated grading system for evaluation of ocular redness associated with dry eye.

Rodriguez JD, Johnston PR, Ousler GW 3rd, Smith LM, Abelson MB.

Clin Ophthalmol. 2013;7:1197-1204. doi: 10.2147/OPTH.S39703. Epub 2013 Jun 20.

40.

Investigation of extended blinks and interblink intervals in subjects with and without dry eye.

Rodriguez JD, Ousler GW 3rd, Johnston PR, Lane K, Abelson MB.

Clin Ophthalmol. 2013;7:337-42. doi: 10.2147/OPTH.S39356. Epub 2013 Feb 14.

41.

The interblink interval in normal and dry eye subjects.

Johnston PR, Rodriguez J, Lane KJ, Ousler G, Abelson MB.

Clin Ophthalmol. 2013;7:253-9. doi: 10.2147/OPTH.S39104. Epub 2013 Feb 1.

42.

Immune- and wound-dependent differential gene expression in an ancient insect.

Johnston PR, Rolff J.

Dev Comp Immunol. 2013 Jul-Aug;40(3-4):320-4. doi: 10.1016/j.dci.2013.01.012. Epub 2013 Feb 8.

PMID:
23395998
43.

A new species of the lenticel fungal genus Claviradulomyces (Ostropales) from the Brazilian Atlantic forest tree Xylopia sericea (Annonaceae).

Barreto RW, Johnston PR, Crous PW, Evans HC.

IMA Fungus. 2012 Dec;3(2):135-41. doi: 10.5598/imafungus.2012.03.02.05. Epub 2012 Nov 15.

44.

Colletotrichum - current status and future directions.

Cannon PF, Damm U, Johnston PR, Weir BS.

Stud Mycol. 2012 Sep 15;73(1):181-213. doi: 10.3114/sim0014.

45.

The Colletotrichum gloeosporioides species complex.

Weir BS, Johnston PR, Damm U.

Stud Mycol. 2012 Sep 15;73(1):115-80. doi: 10.3114/sim0011. Epub 2012 Aug 27.

46.

The Colletotrichum boninense species complex.

Damm U, Cannon PF, Woudenberg JH, Johnston PR, Weir BS, Tan YP, Shivas RG, Crous PW.

Stud Mycol. 2012 Sep 15;73(1):1-36. doi: 10.3114/sim0002. Epub 2012 Feb 29.

47.

Identification of immunological expressed sequence tags in the mealworm beetle Tenebrio molitor.

Dobson AJ, Johnston PR, Vilcinskas A, Rolff J.

J Insect Physiol. 2012 Dec;58(12):1556-61. doi: 10.1016/j.jinsphys.2012.09.009. Epub 2012 Oct 4.

PMID:
23041376
48.

How ischaemic region shape affects ST potentials in models of cardiac tissue.

Barnes JP, Johnston PR.

Math Biosci. 2012 Oct;239(2):213-21. doi: 10.1016/j.mbs.2012.05.009. Epub 2012 Jun 12.

PMID:
22698893
49.

The amsterdam declaration on fungal nomenclature.

Hawksworth DL, Crous PW, Redhead SA, Reynolds DR, Samson RA, Seifert KA, Taylor JW, Wingfield MJ, Abaci O, Aime C, Asan A, Bai FY, de Beer ZW, Begerow D, Berikten D, Boekhout T, Buchanan PK, Burgess T, Buzina W, Cai L, Cannon PF, Crane JL, Damm U, Daniel HM, van Diepeningen AD, Druzhinina I, Dyer PS, Eberhardt U, Fell JW, Frisvad JC, Geiser DM, Geml J, Glienke C, Gräfenhan T, Groenewald JZ, Groenewald M, de Gruyter J, Guého-Kellermann E, Guo LD, Hibbett DS, Hong SB, de Hoog GS, Houbraken J, Huhndorf SM, Hyde KD, Ismail A, Johnston PR, Kadaifciler DG, Kirk PM, Kõljalg U, Kurtzman CP, Lagneau PE, Lévesque CA, Liu X, Lombard L, Meyer W, Miller A, Minter DW, Najafzadeh MJ, Norvell L, Ozerskaya SM, Oziç R, Pennycook SR, Peterson SW, Pettersson OV, Quaedvlieg W, Robert VA, Ruibal C, Schnürer J, Schroers HJ, Shivas R, Slippers B, Spierenburg H, Takashima M, Taşkın E, Thines M, Thrane U, Uztan AH, van Raak M, Varga J, Vasco A, Verkley G, Videira SI, de Vries RP, Weir BS, Yilmaz N, Yurkov A, Zhang N.

IMA Fungus. 2011 Jun;2(1):105-12. doi: 10.5598/imafungus.2011.02.01.14. Epub 2011 Jun 7.

50.

Mechanisms and fitness effects of antibacterial defences in a carrion beetle.

Arce AN, Johnston PR, Smiseth PT, Rozen DE.

J Evol Biol. 2012 May;25(5):930-7. doi: 10.1111/j.1420-9101.2012.02486.x. Epub 2012 Mar 12.

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