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Racial Bias and Its Impact on Children and Adolescents.

Johnson TJ.

Pediatr Clin North Am. 2020 Apr;67(2):425-436. doi: 10.1016/j.pcl.2019.12.011. Review.


Prevalence and trend analysis of antimicrobial resistance in clinical Escherichia coli isolates collected from diseased pigs in the USA between 2006 and 2016.

Hayer SS, Rovira A, Olsen K, Johnson TJ, Vannucci F, Rendahl A, Perez A, Alvarez J.

Transbound Emerg Dis. 2020 Feb 25. doi: 10.1111/tbed.13528. [Epub ahead of print]


Characterization of antimicrobial resistance genes in Enterobacteriaceae carried by suburban mesocarnivores and locally owned and stray dogs.

Worsley-Tonks KEL, Miller EA, Gehrt SD, McKenzie SC, Travis DA, Johnson TJ, Craft ME.

Zoonoses Public Health. 2020 Feb 7. doi: 10.1111/zph.12691. [Epub ahead of print]


Draft Genome Sequence of "Candidatus Arthromitus" UMNCA01, a Suspected Commensal Isolated from the Gut Microbiome of Commercial Turkey.

Hedblom GA, Dev K, Bowden SD, Weber B, Noll S, Baumler DJ, Johnson TJ.

Microbiol Resour Announc. 2020 Jan 23;9(4). pii: e01143-19. doi: 10.1128/MRA.01143-19.


A Simple Method for Measuring Fine-to-Ultrafine Aerosols Using Bipolar Charge Equilibrium.

Nishida RT, Johnson TJ, Hassim JS, Graves BM, Boies AM, Hochgreb S.

ACS Sens. 2020 Feb 28;5(2):447-453. doi: 10.1021/acssensors.9b02143. Epub 2020 Feb 4.


Prevalence and time trend analysis of antimicrobial resistance in respiratory bacterial pathogens collected from diseased pigs in USA between 2006-2016.

Hayer SS, Rovira A, Olsen K, Johnson TJ, Vannucci F, Rendahl A, Perez A, Alvarez J.

Res Vet Sci. 2020 Feb;128:135-144. doi: 10.1016/j.rvsc.2019.11.010. Epub 2019 Nov 21.


Microbial associations and spatial proximity predict North American moose (Alces alces) gastrointestinal community composition.

Fountain-Jones NM, Clark NJ, Kinsley AC, Carstensen M, Forester J, Johnson TJ, Miller EA, Moore S, Wolf TM, Craft ME.

J Anim Ecol. 2020 Mar;89(3):817-828. doi: 10.1111/1365-2656.13154. Epub 2020 Jan 26.


Genome-wide association analysis reveals QTL and candidate mutations involved in white spotting in cattle.

Jivanji S, Worth G, Lopdell TJ, Yeates A, Couldrey C, Reynolds E, Tiplady K, McNaughton L, Johnson TJJ, Davis SR, Harris B, Spelman R, Snell RG, Garrick D, Littlejohn MD.

Genet Sel Evol. 2019 Nov 8;51(1):62. doi: 10.1186/s12711-019-0506-2.


Molecular epidemiology of Mycoplasma hyorhinis porcine field isolates in the United States.

Clavijo MJ, Sreevatsan S, Johnson TJ, Rovira A.

PLoS One. 2019 Oct 21;14(10):e0223653. doi: 10.1371/journal.pone.0223653. eCollection 2019.


Antibiotics and Host-Tailored Probiotics Similarly Modulate Effects on the Developing Avian Microbiome, Mycobiome, and Host Gene Expression.

Ward TL, Weber BP, Mendoza KM, Danzeisen JL, Llop K, Lang K, Clayton JB, Grace E, Brannon J, Radovic I, Beauclaire M, Heisel TJ, Knights D, Cardona C, Kogut M, Johnson C, Noll SL, Arsenault R, Reed KM, Johnson TJ.

mBio. 2019 Oct 15;10(5). pii: e02171-19. doi: 10.1128/mBio.02171-19.


Antibiotic Resistance Genes in Freshwater Trout Farms in a Watershed in Chile.

Bueno I, Travis D, Gonzalez-Rocha G, Alvarez J, Lima C, Benitez CG, Phelps NBD, Wass B, Johnson TJ, Zhang Q, Ishii S, Singer RS.

J Environ Qual. 2019 Sep;48(5):1462-1471. doi: 10.2134/jeq2018.12.0431.


Expression of the Nontypeable Haemophilus influenzae Type IV Pilus Is Stimulated by Coculture with Host Respiratory Tract Epithelial Cells.

Mokrzan EM, Johnson TJ, Bakaletz LO.

Infect Immun. 2019 Nov 18;87(12). pii: e00704-19. doi: 10.1128/IAI.00704-19. Print 2019 Dec.


Correction: Mediators of racial and ethnic disparity in mother's own milk feeding in very low birth weight infants.

Patel AL, Schoeny ME, Hoban R, Johnson TJ, Bigger H, Engstrom JL, Fleurant E, Riley B, Meier PP.

Pediatr Res. 2019 Dec;86(6):786. doi: 10.1038/s41390-019-0576-4.


Racial Differences in Sepsis Recognition in the Emergency Department.

Raman J, Johnson TJ, Hayes K, Balamuth F.

Pediatrics. 2019 Oct;144(4). pii: e20190348. doi: 10.1542/peds.2019-0348. Epub 2019 Sep 13.


2019 report of the ASHP treasurer.

Johnson TJ.

Am J Health Syst Pharm. 2019 Sep 3;76(18):1437-1439. doi: 10.1093/ajhp/zxz145. No abstract available.


Spatio-temporal distribution of Spiroplasma infections in the tsetse fly (Glossina fuscipes fuscipes) in northern Uganda.

Schneider DI, Saarman N, Onyango MG, Hyseni C, Opiro R, Echodu R, O'Neill M, Bloch D, Vigneron A, Johnson TJ, Dion K, Weiss BL, Opiyo E, Caccone A, Aksoy S.

PLoS Negl Trop Dis. 2019 Aug 1;13(8):e0007340. doi: 10.1371/journal.pntd.0007340. eCollection 2019 Aug.


Diverse Commensal Escherichia coli Clones and Plasmids Disseminate Antimicrobial Resistance Genes in Domestic Animals and Children in a Semirural Community in Ecuador.

Salinas L, Cárdenas P, Johnson TJ, Vasco K, Graham J, Trueba G.

mSphere. 2019 May 22;4(3). pii: e00316-19. doi: 10.1128/mSphere.00316-19.


Bacterial community structure and function distinguish gut sites in captive red-shanked doucs (Pygathrix nemaeus).

Clayton JB, Shields-Cutler RR, Hoops SL, Al-Ghalith GA, Sha JCM, Johnson TJ, Knights D.

Am J Primatol. 2019 Oct;81(10-11):e22977. doi: 10.1002/ajp.22977. Epub 2019 Apr 18.


Fixed-Dose Four-Factor Prothrombin Complex Concentrate for Vitamin K Antagonist Reversal: Does One Dose Fit All?

Schwebach AA, Waybright RA, Johnson TJ.

Pharmacotherapy. 2019 May;39(5):599-608. doi: 10.1002/phar.2261. Epub 2019 Apr 21. Review.


Farm Stage, Bird Age, and Body Site Dominantly Affect the Quantity, Taxonomic Composition, and Dynamics of Respiratory and Gut Microbiota of Commercial Layer Chickens.

Ngunjiri JM, Taylor KJM, Abundo MC, Jang H, Elaish M, Kc M, Ghorbani A, Wijeratne S, Weber BP, Johnson TJ, Lee CW.

Appl Environ Microbiol. 2019 Apr 18;85(9). pii: e03137-18. doi: 10.1128/AEM.03137-18. Print 2019 May 1.


Effect of Turkey-Derived Beneficial Bacteria Lactobacillus salivarius and Lactobacillus ingluviei on a Multidrug-Resistant Salmonella Heidelberg Strain in Turkey Poults.

Thomas JV, Nair DVT, Noll S, Johnson TJ, Cardona C, Johny AK.

J Food Prot. 2019 Mar;82(3):435-440. doi: 10.4315/0362-028X.JFP-18-286.


Evaluation of Factors Related to Prolonged Lengths of Stay for Patients With Autism With or Without Intellectual Disability.

Ailey SH, Johnson TJ, Cabrera A.

J Psychosoc Nurs Ment Health Serv. 2019 Jul 1;57(7):17-22. doi: 10.3928/02793695-20190205-01. Epub 2019 Feb 8.


Circulation of Plasmids Harboring Resistance Genes to Quinolones and/or Extended-Spectrum Cephalosporins in Multiple Salmonella enterica Serotypes from Swine in the United States.

Elnekave E, Hong SL, Lim S, Hayer SS, Boxrud D, Taylor AJ, Lappi V, Noyes N, Johnson TJ, Rovira A, Davies P, Perez A, Alvarez J.

Antimicrob Agents Chemother. 2019 Mar 27;63(4). pii: e02602-18. doi: 10.1128/AAC.02602-18. Print 2019 Apr.


A cluster of carbapenemase-producing Enterobacter cloacae complex ST171 at a tertiary care center demonstrating an ongoing regional threat.

Pereira EC, Anacker M, Houseman J, Horn ME, Johnson TJ, Lynfield R, Vagnone PS, Witwer M, Kline S.

Am J Infect Control. 2019 Jul;47(7):767-772. doi: 10.1016/j.ajic.2018.12.016. Epub 2019 Jan 31.


Mediators of racial and ethnic disparity in mother's own milk feeding in very low birth weight infants.

Patel AL, Schoeny ME, Hoban R, Johnson TJ, Bigger H, Engstrom JL, Fleurant E, Riley B, Meier PP.

Pediatr Res. 2019 Apr;85(5):662-670. doi: 10.1038/s41390-019-0290-2. Epub 2019 Jan 18. Erratum in: Pediatr Res. 2019 Sep 18;:.


Multiple QTL underlie milk phenotypes at the CSF2RB locus.

Lopdell TJ, Tiplady K, Couldrey C, Johnson TJJ, Keehan M, Davis SR, Harris BL, Spelman RJ, Snell RG, Littlejohn MD.

Genet Sel Evol. 2019 Jan 24;51(1):3. doi: 10.1186/s12711-019-0446-x.


Piglet gut microbial shifts early in life: causes and effects.

Guevarra RB, Lee JH, Lee SH, Seok MJ, Kim DW, Kang BN, Johnson TJ, Isaacson RE, Kim HB.

J Anim Sci Biotechnol. 2019 Jan 14;10:1. doi: 10.1186/s40104-018-0308-3. eCollection 2019. Review.


Inflammatory Effects of Blood-Air Interface in a Porcine Cardiopulmonary Bypass Model.

Carr BD, Johnson TJ, Gomez-Rexrode A, Mohammed A, Coughlin M, Toomasian JM, Rojas-Pena A, Bartlett RH, Haft JW.

ASAIO J. 2020 Jan;66(1):72-78. doi: 10.1097/MAT.0000000000000938.


Characterization of Campylobacter jejuni, Campylobacter upsaliensis, and a novel Campylobacter sp. in a captive non-human primate zoological collection.

Clayton JB, Danzeisen JL, Johnson TJ, Trent AM, Hayer SS, Murphy T, Wuenschmann A, Elder M, Shen Z, Mannion A, Bryant E, Knights D, Fox JG.

J Med Primatol. 2019 Apr;48(2):114-122. doi: 10.1111/jmp.12393. Epub 2018 Dec 9.


Assessing Transmission of Antimicrobial-Resistant Escherichia coli in Wild Giraffe Contact Networks.

Miller EA, Johnson TJ, Omondi G, Atwill ER, Isbell LA, McCowan B, VanderWaal K.

Appl Environ Microbiol. 2018 Dec 13;85(1). pii: e02136-18. doi: 10.1128/AEM.02136-18. Print 2019 Jan 1.


Phylogenomic Analysis of Extraintestinal Pathogenic Escherichia coli Sequence Type 1193, an Emerging Multidrug-Resistant Clonal Group.

Johnson TJ, Elnekave E, Miller EA, Munoz-Aguayo J, Flores Figueroa C, Johnston B, Nielson DW, Logue CM, Johnson JR.

Antimicrob Agents Chemother. 2018 Dec 21;63(1). pii: e01913-18. doi: 10.1128/AAC.01913-18. Print 2019 Jan.


NICU human milk dose and health care use after NICU discharge in very low birth weight infants.

Johnson TJ, Patra K, Greene MM, Hamilton M, Dabrowski E, Meier PP, Patel AL.

J Perinatol. 2019 Jan;39(1):120-128. doi: 10.1038/s41372-018-0246-0. Epub 2018 Oct 19.


Segmented Filamentous Bacteria - Metabolism Meets Immunity.

Hedblom GA, Reiland HA, Sylte MJ, Johnson TJ, Baumler DJ.

Front Microbiol. 2018 Aug 24;9:1991. doi: 10.3389/fmicb.2018.01991. eCollection 2018. Review.


Escherichia coli ST131-H22 as a Foodborne Uropathogen.

Liu CM, Stegger M, Aziz M, Johnson TJ, Waits K, Nordstrom L, Gauld L, Weaver B, Rolland D, Statham S, Horwinski J, Sariya S, Davis GS, Sokurenko E, Keim P, Johnson JR, Price LB.

mBio. 2018 Aug 28;9(4). pii: e00470-18. doi: 10.1128/mBio.00470-18.


Single-angle reflectance spectroscopy to determine the optical constants n and k: considerations in the far-infrared domain.

DeVetter BM, Scharko NK, Cannon BD, Myers TL, Johnson TJ.

Appl Opt. 2018 Aug 1;57(22):6587-6597. doi: 10.1364/AO.57.006587.


Optical and Chemical Characterization of Uranium Dioxide (UO2) and Uraninite Mineral: Calculation of the Fundamental Optical Constants.

DeVetter BM, Myers TL, Cannon BD, Scharko NK, Kelly-Gorham MRK, Corbey JF, Schemer-Kohrn AL, Resch CT, Reilly DD, Johnson TJ.

J Phys Chem A. 2018 Sep 6;122(35):7062-7070. doi: 10.1021/acs.jpca.8b05943. Epub 2018 Aug 24.


Associations Between Nutrition, Gut Microbiome, and Health in A Novel Nonhuman Primate Model.

Clayton JB, Al-Ghalith GA, Long HT, Tuan BV, Cabana F, Huang H, Vangay P, Ward T, Minh VV, Tam NA, Dat NT, Travis DA, Murtaugh MP, Covert H, Glander KE, Nadler T, Toddes B, Sha JCM, Singer R, Knights D, Johnson TJ.

Sci Rep. 2018 Jul 24;8(1):11159. doi: 10.1038/s41598-018-29277-x.


Loss of Cyclin-Dependent Kinase Inhibitor Alters Oncolytic Adenovirus Replication and Promotes More Efficient Virus Production.

Höti N, Johnson TJ, Chowdhury WH, Rodriguez R.

Cancers (Basel). 2018 Jun 15;10(6). pii: E202. doi: 10.3390/cancers10060202.


The gut microbiome of nonhuman primates: Lessons in ecology and evolution.

Clayton JB, Gomez A, Amato K, Knights D, Travis DA, Blekhman R, Knight R, Leigh S, Stumpf R, Wolf T, Glander KE, Cabana F, Johnson TJ.

Am J Primatol. 2018 Jun;80(6):e22867. doi: 10.1002/ajp.22867. Epub 2018 Jun 4. Review.


Functional Status Change Among Children With Extracorporeal Membrane Oxygenation to Support Cardiopulmonary Resuscitation in a Pediatric Cardiac ICU: A Single Institution Report.

Beshish AG, Baginski MR, Johnson TJ, Deatrick BK, Barbaro RP, Owens GE.

Pediatr Crit Care Med. 2018 Jul;19(7):665-671. doi: 10.1097/PCC.0000000000001555.


Microbiome profiling of commercial pigs from farrow to finish.

De Rodas B, Youmans BP, Danzeisen JL, Tran H, Johnson TJ.

J Anim Sci. 2018 May 4;96(5):1778-1794. doi: 10.1093/jas/sky109.


A Consistent and Predictable Commercial Broiler Chicken Bacterial Microbiota in Antibiotic-Free Production Displays Strong Correlations with Performance.

Johnson TJ, Youmans BP, Noll S, Cardona C, Evans NP, Karnezos TP, Ngunjiri JM, Abundo MC, Lee CW.

Appl Environ Microbiol. 2018 May 31;84(12). pii: e00362-18. doi: 10.1128/AEM.00362-18. Print 2018 Jun 15.


Growth Dynamics of Patient-Provider Internet Communication: Trend Analysis Using the Health Information National Trends Survey (2003 to 2013).

Tarver WL, Menser T, Hesse BW, Johnson TJ, Beckjord E, Ford EW, Huerta TR.

J Med Internet Res. 2018 Mar 29;20(3):e109. doi: 10.2196/jmir.7851.


Development and innovation of system resources to optimize patient care.

Johnson TJ, Brownlee MJ.

Am J Health Syst Pharm. 2018 Apr 1;75(7):465-472. doi: 10.2146/ajhp170402.


Endothelial cell Pannexin1 modulates severity of ischemic stroke by regulating cerebral inflammation and myogenic tone.

Good ME, Eucker SA, Li J, Bacon HM, Lang SM, Butcher JT, Johnson TJ, Gaykema RP, Patel MK, Zuo Z, Isakson BE.

JCI Insight. 2018 Mar 22;3(6). pii: 96272. doi: 10.1172/jci.insight.96272.


Impact of co-carriage of IncA/C plasmids with additional plasmids on the transfer of antimicrobial resistance in Salmonella enterica isolates.

Han J, Pendleton SJ, Deck J, Singh R, Gilbert J, Johnson TJ, Sanad YM, Nayak R, Foley SL.

Int J Food Microbiol. 2018 Apr 20;271:77-84. doi: 10.1016/j.ijfoodmicro.2018.01.018. Epub 2018 Jan 31.


Photobioreactor cultivation strategies for microalgae and cyanobacteria.

Johnson TJ, Katuwal S, Anderson GA, Gu L, Zhou R, Gibbons WR.

Biotechnol Prog. 2018 Jul;34(4):811-827. doi: 10.1002/btpr.2628. Epub 2018 Mar 23. Review.


Einstein@Home discovers a radio-quiet gamma-ray millisecond pulsar.

Clark CJ, Pletsch HJ, Wu J, Guillemot L, Kerr M, Johnson TJ, Camilo F, Salvetti D, Allen B, Anderson D, Aulbert C, Beer C, Bock O, Cuéllar A, Eggenstein HB, Fehrmann H, Kramer M, Kwang SA, Machenschalk B, Nieder L, Ackermann M, Ajello M, Baldini L, Ballet J, Barbiellini G, Bastieri D, Bellazzini R, Bissaldi E, Blandford RD, Bloom ED, Bonino R, Bottacini E, Brandt TJ, Bregeon J, Bruel P, Buehler R, Burnett TH, Buson S, Cameron RA, Caputo R, Caraveo PA, Cavazzuti E, Cecchi C, Charles E, Chekhtman A, Ciprini S, Cominsky LR, Costantin D, Cutini S, D'Ammando F, De Luca A, Desiante R, Di Venere L, Di Mauro M, Di Lalla N, Digel SW, Favuzzi C, Ferrara EC, Franckowiak A, Fukazawa Y, Funk S, Fusco P, Gargano F, Gasparrini D, Giglietto N, Giordano F, Giroletti M, Gomez-Vargas GA, Green D, Grenier IA, Guiriec S, Harding AK, Hewitt JW, Horan D, Jóhannesson G, Kensei S, Kuss M, La Mura G, Larsson S, Latronico L, Li J, Longo F, Loparco F, Lovellette MN, Lubrano P, Magill JD, Maldera S, Manfreda A, Mazziotta MN, McEnery JE, Michelson PF, Mirabal N, Mitthumsiri W, Mizuno T, Monzani ME, Morselli A, Moskalenko IV, Nuss E, Ohsugi T, Omodei N, Orienti M, Orlando E, Palatiello M, Paliya VS, de Palma F, Paneque D, Perkins JS, Persic M, Pesce-Rollins M, Porter TA, Principe G, Rainò S, Rando R, Ray PS, Razzano M, Reimer A, Reimer O, Romani RW, Saz Parkinson PM, Sgrò C, Siskind EJ, Smith DA, Spada F, Spandre G, Spinelli P, Thayer JB, Thompson DJ, Torres DF, Troja E, Vianello G, Wood K, Wood M.

Sci Adv. 2018 Feb 28;4(2):eaao7228. doi: 10.1126/sciadv.aao7228. eCollection 2018 Feb.


Spreading Ebola Panic: Newspaper and Social Media Coverage of the 2014 Ebola Health Crisis.

Kilgo DK, Yoo J, Johnson TJ.

Health Commun. 2019 Jul;34(8):811-817. doi: 10.1080/10410236.2018.1437524. Epub 2018 Feb 23.


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