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Items: 22


Mechanism of NMDA receptor channel block by MK-801 and memantine.

Song X, Jensen MØ, Jogini V, Stein RA, Lee CH, Mchaourab HS, Shaw DE, Gouaux E.

Nature. 2018 Apr;556(7702):515-519. doi: 10.1038/s41586-018-0039-9. Epub 2018 Apr 18.


Atomic-level simulation of current-voltage relationships in single-file ion channels.

Jensen MØ, Jogini V, Eastwood MP, Shaw DE.

J Gen Physiol. 2013 May;141(5):619-32. doi: 10.1085/jgp.201210820. Epub 2013 Apr 15.


Expression, purification, and reconstitution of the voltage-sensing domain from Ci-VSP.

Li Q, Jogini V, Wanderling S, Cortes DM, Perozo E.

Biochemistry. 2012 Oct 16;51(41):8132-42. doi: 10.1021/bi300980q. Epub 2012 Oct 5.


Mechanism of Cd2+ coordination during slow inactivation in potassium channels.

Raghuraman H, Cordero-Morales JF, Jogini V, Pan AC, Kollewe A, Roux B, Perozo E.

Structure. 2012 Aug 8;20(8):1332-42. doi: 10.1016/j.str.2012.03.027. Epub 2012 Jul 5.


Mechanism of voltage gating in potassium channels.

Jensen MØ, Jogini V, Borhani DW, Leffler AE, Dror RO, Shaw DE.

Science. 2012 Apr 13;336(6078):229-33. doi: 10.1126/science.1216533.


A multipoint hydrogen-bond network underlying KcsA C-type inactivation.

Cordero-Morales JF, Jogini V, Chakrapani S, Perozo E.

Biophys J. 2011 May 18;100(10):2387-93. doi: 10.1016/j.bpj.2011.01.073.


On the structural basis of modal gating behavior in K(+) channels.

Chakrapani S, Cordero-Morales JF, Jogini V, Pan AC, Cortes DM, Roux B, Perozo E.

Nat Struct Mol Biol. 2011 Jan;18(1):67-74. doi: 10.1038/nsmb.1968. Epub 2010 Dec 26.


Voltage profile along the permeation pathway of an open channel.

Contreras JE, Chen J, Lau AY, Jogini V, Roux B, Holmgren M.

Biophys J. 2010 Nov 3;99(9):2863-9. doi: 10.1016/j.bpj.2010.08.053.


Structural dynamics of the magnesium-bound conformation of CorA in a lipid bilayer.

Dalmas O, Cuello LG, Jogini V, Cortes DM, Roux B, Perozo E.

Structure. 2010 Jul 14;18(7):868-78. doi: 10.1016/j.str.2010.04.009.


Structural basis for the coupling between activation and inactivation gates in K(+) channels.

Cuello LG, Jogini V, Cortes DM, Pan AC, Gagnon DG, Dalmas O, Cordero-Morales JF, Chakrapani S, Roux B, Perozo E.

Nature. 2010 Jul 8;466(7303):272-5. doi: 10.1038/nature09136.


Structural mechanism of C-type inactivation in K(+) channels.

Cuello LG, Jogini V, Cortes DM, Perozo E.

Nature. 2010 Jul 8;466(7303):203-8. doi: 10.1038/nature09153.


Calculation of the gating charge for the Kv1.2 voltage-activated potassium channel.

Khalili-Araghi F, Jogini V, Yarov-Yarovoy V, Tajkhorshid E, Roux B, Schulten K.

Biophys J. 2010 May 19;98(10):2189-98. doi: 10.1016/j.bpj.2010.02.056.


Principles of conduction and hydrophobic gating in K+ channels.

Jensen MØ, Borhani DW, Lindorff-Larsen K, Maragakis P, Jogini V, Eastwood MP, Dror RO, Shaw DE.

Proc Natl Acad Sci U S A. 2010 Mar 30;107(13):5833-8. doi: 10.1073/pnas.0911691107. Epub 2010 Mar 15.


Design and characterization of a constitutively open KcsA.

Cuello LG, Jogini V, Cortes DM, Sompornpisut A, Purdy MD, Wiener MC, Perozo E.

FEBS Lett. 2010 Mar 19;584(6):1133-8. doi: 10.1016/j.febslet.2010.02.015. Epub 2010 Feb 12.


A molecular mechanism for proton-dependent gating in KcsA.

Cuello LG, Cortes DM, Jogini V, Sompornpisut A, Perozo E.

FEBS Lett. 2010 Mar 19;584(6):1126-32. doi: 10.1016/j.febslet.2010.02.003. Epub 2010 Feb 6.


Atomic constraints between the voltage sensor and the pore domain in a voltage-gated K+ channel of known structure.

Lewis A, Jogini V, Blachowicz L, Lainé M, Roux B.

J Gen Physiol. 2008 Jun;131(6):549-61. doi: 10.1085/jgp.200809962.


Molecular driving forces determining potassium channel slow inactivation.

Cordero-Morales JF, Jogini V, Lewis A, Vásquez V, Cortes DM, Roux B, Perozo E.

Nat Struct Mol Biol. 2007 Nov;14(11):1062-9. Epub 2007 Oct 7.


Dynamics of the Kv1.2 voltage-gated K+ channel in a membrane environment.

Jogini V, Roux B.

Biophys J. 2007 Nov 1;93(9):3070-82. Epub 2007 Aug 17.


Mechanism of intracellular block of the KcsA K+ channel by tetrabutylammonium: insights from X-ray crystallography, electrophysiology and replica-exchange molecular dynamics simulations.

Faraldo-Gómez JD, Kutluay E, Jogini V, Zhao Y, Heginbotham L, Roux B.

J Mol Biol. 2007 Jan 19;365(3):649-62. Epub 2006 Sep 29.


Molecular determinants of gating at the potassium-channel selectivity filter.

Cordero-Morales JF, Cuello LG, Zhao Y, Jogini V, Cortes DM, Roux B, Perozo E.

Nat Struct Mol Biol. 2006 Apr;13(4):311-8. Epub 2006 Mar 12.


Electrostatics of the intracellular vestibule of K+ channels.

Jogini V, Roux B.

J Mol Biol. 2005 Nov 25;354(2):272-88. Epub 2005 Sep 30. Erratum in: J Mol Biol. 2007 Nov 9;373(5):1374.


Transglutaminase 5 is regulated by guanine-adenine nucleotides.

Candi E, Paradisi A, Terrinoni A, Pietroni V, Oddi S, Cadot B, Jogini V, Meiyappan M, Clardy J, Finazzi-Agro A, Melino G.

Biochem J. 2004 Jul 1;381(Pt 1):313-9.

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