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Items: 1 to 50 of 168

1.

Global phylogeography and ancient evolution of the widespread human gut virus crAssphage.

Edwards RA, Vega AA, Norman HM, Ohaeri M, Levi K, Dinsdale EA, Cinek O, Aziz RK, McNair K, Barr JJ, Bibby K, Brouns SJJ, Cazares A, de Jonge PA, Desnues C, Díaz Muñoz SL, Fineran PC, Kurilshikov A, Lavigne R, Mazankova K, McCarthy DT, Nobrega FL, Reyes Muñoz A, Tapia G, Trefault N, Tyakht AV, Vinuesa P, Wagemans J, Zhernakova A, Aarestrup FM, Ahmadov G, Alassaf A, Anton J, Asangba A, Billings EK, Cantu VA, Carlton JM, Cazares D, Cho GS, Condeff T, Cortés P, Cranfield M, Cuevas DA, De la Iglesia R, Decewicz P, Doane MP, Dominy NJ, Dziewit L, Elwasila BM, Eren AM, Franz C, Fu J, Garcia-Aljaro C, Ghedin E, Gulino KM, Haggerty JM, Head SR, Hendriksen RS, Hill C, Hyöty H, Ilina EN, Irwin MT, Jeffries TC, Jofre J, Junge RE, Kelley ST, Khan Mirzaei M, Kowalewski M, Kumaresan D, Leigh SR, Lipson D, Lisitsyna ES, Llagostera M, Maritz JM, Marr LC, McCann A, Molshanski-Mor S, Monteiro S, Moreira-Grez B, Morris M, Mugisha L, Muniesa M, Neve H, Nguyen NP, Nigro OD, Nilsson AS, O'Connell T, Odeh R, Oliver A, Piuri M, Prussin Ii AJ, Qimron U, Quan ZX, Rainetova P, Ramírez-Rojas A, Raya R, Reasor K, Rice GAO, Rossi A, Santos R, Shimashita J, Stachler EN, Stene LC, Strain R, Stumpf R, Torres PJ, Twaddle A, Ugochi Ibekwe M, Villagra N, Wandro S, White B, Whiteley A, Whiteson KL, Wijmenga C, Zambrano MM, Zschach H, Dutilh BE.

Nat Microbiol. 2019 Jul 8. doi: 10.1038/s41564-019-0494-6. [Epub ahead of print]

PMID:
31285584
2.

Dynamics of crAssphage as a human source tracking marker in potentially faecally polluted environments.

Ballesté E, Pascual-Benito M, Martín-Díaz J, Blanch AR, Lucena F, Muniesa M, Jofre J, García-Aljaro C.

Water Res. 2019 May 15;155:233-244. doi: 10.1016/j.watres.2019.02.042. Epub 2019 Feb 27.

PMID:
30851594
3.

New approach for the simultaneous detection of somatic coliphages and F-specific RNA coliphages as indicators of fecal pollution.

Toribio-Avedillo D, Martín-Díaz J, Jofre J, Blanch AR, Muniesa M.

Sci Total Environ. 2019 Mar 10;655:263-272. doi: 10.1016/j.scitotenv.2018.11.198. Epub 2018 Nov 14.

PMID:
30471594
4.

Pathogens, faecal indicators and human-specific microbial source-tracking markers in sewage.

García-Aljaro C, Blanch AR, Campos C, Jofre J, Lucena F.

J Appl Microbiol. 2019 Mar;126(3):701-717. doi: 10.1111/jam.14112. Epub 2019 Jan 2. Review.

PMID:
30244503
5.

Detection of Bacteriophage Particles Containing Antibiotic Resistance Genes in the Sputum of Cystic Fibrosis Patients.

Brown-Jaque M, Rodriguez Oyarzun L, Cornejo-Sánchez T, Martín-Gómez MT, Gartner S, de Gracia J, Rovira S, Alvarez A, Jofre J, González-López JJ, Muniesa M.

Front Microbiol. 2018 May 1;9:856. doi: 10.3389/fmicb.2018.00856. eCollection 2018.

6.

Is Genetic Mobilization Considered When Using Bacteriophages in Antimicrobial Therapy?

Rodríguez-Rubio L, Jofre J, Muniesa M.

Antibiotics (Basel). 2017 Dec 5;6(4). pii: E32. doi: 10.3390/antibiotics6040032.

7.

Isolation of Bacteriophages of the Anaerobic Bacteria Bacteroides.

García-Aljaro C, Muniesa M, Jofre J.

Methods Mol Biol. 2018;1693:11-22. doi: 10.1007/978-1-4939-7395-8_2.

PMID:
29119428
8.

Bluephage: A rapid method for the detection of somatic coliphages used as indicators of fecal pollution in water.

Muniesa M, Ballesté E, Imamovic L, Pascual-Benito M, Toribio-Avedillo D, Lucena F, Blanch AR, Jofre J.

Water Res. 2018 Jan 1;128:10-19. doi: 10.1016/j.watres.2017.10.030. Epub 2017 Oct 16.

PMID:
29078067
9.

Use of non-linear mixed-effects modelling and regression analysis to predict the number of somatic coliphages by plaque enumeration after 3 hours of incubation.

Mendez J, Monleon-Getino A, Jofre J, Lucena F.

J Water Health. 2017 Oct;15(5):706-717. doi: 10.2166/wh.2017.067.

PMID:
29040074
10.

Determination of crAssphage in water samples and applicability for tracking human faecal pollution.

García-Aljaro C, Ballesté E, Muniesa M, Jofre J.

Microb Biotechnol. 2017 Nov;10(6):1775-1780. doi: 10.1111/1751-7915.12841. Epub 2017 Sep 19.

11.

Simultaneous detection of somatic and F-specific coliphages in different settings by Escherichia coli strain CB390.

Agulló-Barceló M, Galofré B, Sala L, García-Aljaro C, Lucena F, Jofre J.

FEMS Microbiol Lett. 2016 Sep;363(17). pii: fnw180. doi: 10.1093/femsle/fnw180. Epub 2016 Jul 31.

PMID:
27481701
12.
13.

Microbial source markers assessment in the Bogotá River basin (Colombia).

Venegas C, Diez H, Blanch AR, Jofre J, Campos C.

J Water Health. 2015 Sep;13(3):801-10. doi: 10.2166/wh.2015.240.

PMID:
26322765
14.

Direct ultrafiltration performance and membrane integrity monitoring by microbiological analysis.

Ferrer O, Casas S, Galvañ C, Lucena F, Bosch A, Galofré B, Mesa J, Jofre J, Bernat X.

Water Res. 2015 Oct 15;83:121-31. doi: 10.1016/j.watres.2015.06.039. Epub 2015 Jun 23.

PMID:
26141428
15.

Bacteriophages as indicators of human and animal faecal contamination in raw and treated wastewaters from Tunisia.

Yahya M, Hmaied F, Jebri S, Jofre J, Hamdi M.

J Appl Microbiol. 2015 May;118(5):1217-25. doi: 10.1111/jam.12774. Epub 2015 Mar 16.

16.

Esthetic failure in implant dentistry.

Fuentealba R, Jofré J.

Dent Clin North Am. 2015 Jan;59(1):227-46. doi: 10.1016/j.cden.2014.08.006. Epub 2014 Sep 26. Review.

PMID:
25434568
17.

Identifying and analyzing bacteriophages in human fecal samples: what could we discover?

Muniesa M, Jofre J.

Future Microbiol. 2014;9(7):879-86. doi: 10.2217/fmb.14.47.

PMID:
25156377
18.

Antibiotic resistance genes in bacterial and bacteriophage fractions of Tunisian and Spanish wastewaters as markers to compare the antibiotic resistance patterns in each population.

Colomer-Lluch M, Calero-Cáceres W, Jebri S, Hmaied F, Muniesa M, Jofre J.

Environ Int. 2014 Dec;73:167-75. doi: 10.1016/j.envint.2014.07.003. Epub 2014 Aug 13.

19.

Characterization of ciprofloxacin-resistant isolates from a wastewater treatment plant and its receiving river.

Marti E, Huerta B, Rodríguez-Mozaz S, Barceló D, Jofre J, Balcázar JL.

Water Res. 2014 Sep 15;61:67-76. doi: 10.1016/j.watres.2014.05.006. Epub 2014 May 14.

PMID:
24880958
20.

Sludge as a potential important source of antibiotic resistance genes in both the bacterial and bacteriophage fractions.

Calero-Cáceres W, Melgarejo A, Colomer-Lluch M, Stoll C, Lucena F, Jofre J, Muniesa M.

Environ Sci Technol. 2014 Jul 1;48(13):7602-11. doi: 10.1021/es501851s. Epub 2014 Jun 10.

PMID:
24873655
21.

Bacteriophages infecting Bacteroides as a marker for microbial source tracking.

Jofre J, Blanch AR, Lucena F, Muniesa M.

Water Res. 2014 May 15;55:1-11. doi: 10.1016/j.watres.2014.02.006. Epub 2014 Feb 11.

PMID:
24583570
22.

Quinolone resistance genes (qnrA and qnrS) in bacteriophage particles from wastewater samples and the effect of inducing agents on packaged antibiotic resistance genes.

Colomer-Lluch M, Jofre J, Muniesa M.

J Antimicrob Chemother. 2014 May;69(5):1265-74. doi: 10.1093/jac/dkt528. Epub 2014 Jan 23.

PMID:
24458509
23.

Prevalence of antibiotic resistance genes and bacterial community composition in a river influenced by a wastewater treatment plant.

Marti E, Jofre J, Balcazar JL.

PLoS One. 2013 Oct 25;8(10):e78906. doi: 10.1371/journal.pone.0078906. eCollection 2013.

24.

Could bacteriophages transfer antibiotic resistance genes from environmental bacteria to human-body associated bacterial populations?

Muniesa M, Colomer-Lluch M, Jofre J.

Mob Genet Elements. 2013 Jul 1;3(4):e25847. Epub 2013 Aug 2.

25.

Antibiotic resistance genes in the bacteriophage DNA fraction of human fecal samples.

Quirós P, Colomer-Lluch M, Martínez-Castillo A, Miró E, Argente M, Jofre J, Navarro F, Muniesa M.

Antimicrob Agents Chemother. 2014;58(1):606-9. doi: 10.1128/AAC.01684-13. Epub 2013 Oct 28.

26.

Effect of gamma irradiation on bacteriophages used as viral indicators.

Jebri S, Hmaied F, Jofre J, MariemYahya, Mendez J, Barkallah I, Hamdi M.

Water Res. 2013 Jul 1;47(11):3673-8. doi: 10.1016/j.watres.2013.04.036. Epub 2013 May 2.

PMID:
23726703
27.

Potential impact of environmental bacteriophages in spreading antibiotic resistance genes.

Muniesa M, Colomer-Lluch M, Jofre J.

Future Microbiol. 2013 Jun;8(6):739-51. doi: 10.2217/fmb.13.32. Review.

PMID:
23701331
28.

Detection of quinolone-resistant Escherichia coli isolates belonging to clonal groups O25b:H4-B2-ST131 and O25b:H4-D-ST69 in raw sewage and river water in Barcelona, Spain.

Colomer-Lluch M, Mora A, López C, Mamani R, Dahbi G, Marzoa J, Herrera A, Viso S, Blanco JE, Blanco M, Alonso MP, Jofre J, Muniesa M, Blanco J.

J Antimicrob Chemother. 2013 Apr;68(4):758-65. doi: 10.1093/jac/dks477. Epub 2012 Dec 7.

PMID:
23221627
29.

Balancing hygienization and anaerobic digestion of raw sewage sludge.

Astals S, Venegas C, Peces M, Jofre J, Lucena F, Mata-Alvarez J.

Water Res. 2012 Dec 1;46(19):6218-27. doi: 10.1016/j.watres.2012.07.035. Epub 2012 Aug 1.

PMID:
23063441
30.

Use of abundance ratios of somatic coliphages and bacteriophages of Bacteroides thetaiotaomicron GA17 for microbial source identification.

Muniesa M, Lucena F, Blanch AR, Payán A, Jofre J.

Water Res. 2012 Dec 1;46(19):6410-8. doi: 10.1016/j.watres.2012.09.015. Epub 2012 Sep 18.

PMID:
23039916
31.

Protocol for immediate implant replacement of infected teeth.

Jofre J, Valenzuela D, Quintana P, Asenjo-Lobos C.

Implant Dent. 2012 Aug;21(4):287-94. doi: 10.1097/ID.0b013e31825cbcf8.

PMID:
22814552
32.

Influence of minimally invasive implant-retained overdenture on patients' quality of life: a randomized clinical trial.

Jofre J, Castiglioni X, Lobos CA.

Clin Oral Implants Res. 2013 Oct;24(10):1173-7. doi: 10.1111/j.1600-0501.2012.02529.x. Epub 2012 Jul 4.

PMID:
22762359
33.

Stability and infectivity of cytolethal distending toxin type V gene-carrying bacteriophages in a water mesocosm and under different inactivation conditions.

Allué-Guardia A, Jofre J, Muniesa M.

Appl Environ Microbiol. 2012 Aug;78(16):5818-23. doi: 10.1128/AEM.00997-12. Epub 2012 Jun 8.

34.

Presence and fate of coliphages and enteric viruses in three wastewater treatment plants effluents and activated sludge from Tunisia.

Jebri S, Jofre J, Barkallah I, Saidi M, Hmaied F.

Environ Sci Pollut Res Int. 2012 Jul;19(6):2195-201. doi: 10.1007/s11356-011-0722-y. Epub 2012 Jan 20.

PMID:
22261843
35.

Bacteriophages carrying antibiotic resistance genes in fecal waste from cattle, pigs, and poultry.

Colomer-Lluch M, Imamovic L, Jofre J, Muniesa M.

Antimicrob Agents Chemother. 2011 Oct;55(10):4908-11. doi: 10.1128/AAC.00535-11. Epub 2011 Aug 1.

36.

Assessing the effects of tertiary treated wastewater reuse on a Mediterranean river (Llobregat, NE Spain): pathogens and indicators [corrected].

Rubiano ME, Agulló-Barceló M, Casas-Mangas R, Jofre J, Lucena F.

Environ Sci Pollut Res Int. 2012 May;19(4):1026-32. doi: 10.1007/s11356-011-0562-9. Epub 2011 Jul 1. Erratum in: Environ Sci Pollut Res Int. 2012 May;19(4):1043.

PMID:
21720867
37.

Bacteriophages and genetic mobilization in sewage and faecally polluted environments.

Muniesa M, Imamovic L, Jofre J.

Microb Biotechnol. 2011 Nov;4(6):725-34. doi: 10.1111/j.1751-7915.2011.00264.x. Epub 2011 Apr 27. Review.

38.

Isolation of bacteriophage host strains of Bacteroides species suitable for tracking sources of animal faecal pollution in water.

Gómez-Doñate M, Payán A, Cortés I, Blanch AR, Lucena F, Jofre J, Muniesa M.

Environ Microbiol. 2011 Jun;13(6):1622-31. doi: 10.1111/j.1462-2920.2011.02474.x. Epub 2011 Mar 28.

PMID:
21443742
39.

[Haemo-cholecyst as a complication of anticoagulant and anti-platelet treatment].

Ángel JM, Bermúdez RP, Conde MA, Sampedro JE, Jofré JG.

Cir Esp. 2011 May;89(5):327-9. doi: 10.1016/j.ciresp.2010.04.013. Epub 2011 Mar 17. Spanish. No abstract available.

PMID:
21419396
40.

Antibiotic resistance genes in the bacteriophage DNA fraction of environmental samples.

Colomer-Lluch M, Jofre J, Muniesa M.

PLoS One. 2011 Mar 3;6(3):e17549. doi: 10.1371/journal.pone.0017549.

41.

Removal of microbial indicators from municipal wastewater by a membrane bioreactor (MBR).

Marti E, Monclús H, Jofre J, Rodriguez-Roda I, Comas J, Balcázar JL.

Bioresour Technol. 2011 Apr;102(8):5004-9. doi: 10.1016/j.biortech.2011.01.068. Epub 2011 Jan 31.

PMID:
21334881
42.

Effect of splinting mini-implants on marginal bone loss: a biomechanical model and clinical randomized study with mandibular overdentures.

Jofre J, Cendoya P, Munoz P.

Int J Oral Maxillofac Implants. 2010 Nov-Dec;25(6):1137-44.

PMID:
21197490
43.

Feasibility of methods based on nucleic acid amplification techniques to fulfil the requirements for microbiological analysis of water quality.

Jofre J, Blanch AR.

J Appl Microbiol. 2010 Dec;109(6):1853-67. doi: 10.1111/j.1365-2672.2010.04830.x. Review.

44.

Quantification of Shiga toxin-converting bacteriophages in wastewater and in fecal samples by real-time quantitative PCR.

Imamovic L, Ballesté E, Jofre J, Muniesa M.

Appl Environ Microbiol. 2010 Sep;76(17):5693-701. doi: 10.1128/AEM.00107-10. Epub 2010 Jul 9.

45.

Survival of splinted mini-implants after contamination with stainless steel.

Jofré J, Conrady Y, Carrasco C.

Int J Oral Maxillofac Implants. 2010 Mar-Apr;25(2):351-6.

PMID:
20369095
46.

The effect of maximum bite force on marginal bone loss of mini-implants supporting a mandibular overdenture: a randomized controlled trial.

Jofré J, Hamada T, Nishimura M, Klattenhoff C.

Clin Oral Implants Res. 2010 Feb;21(2):243-9. doi: 10.1111/j.1600-0501.2009.01834.x.

PMID:
20070758
47.

Quantification of Shiga toxin 2-encoding bacteriophages, by real-time PCR and correlation with phage infectivity.

Imamovic L, Serra-Moreno R, Jofre J, Muniesa M.

J Appl Microbiol. 2010 Mar;108(3):1105-14. doi: 10.1111/j.1365-2672.2010.04664.x. Epub 2010 Jan 11.

48.

Detection of somatic coliphages through a bioluminescence assay measuring phage mediated release of adenylate kinase and adenosine 5'-triphosphate.

Guzmán Luna C, Costán-Longares A, Lucena F, Jofre J.

J Virol Methods. 2009 Oct;161(1):107-13. doi: 10.1016/j.jviromet.2009.05.021. Epub 2009 Jun 6.

PMID:
19501620
49.

Phage-mediated Shiga toxin 2 gene transfer in food and water.

Imamovic L, Jofre J, Schmidt H, Serra-Moreno R, Muniesa M.

Appl Environ Microbiol. 2009 Mar;75(6):1764-8. doi: 10.1128/AEM.02273-08. Epub 2009 Jan 23.

50.

Differential persistence of F-specific RNA phage subgroups hinders their use as single tracers for faecal source tracking in surface water.

Muniesa M, Payan A, Moce-Llivina L, Blanch AR, Jofre J.

Water Res. 2009 Apr;43(6):1559-64. doi: 10.1016/j.watres.2008.12.038. Epub 2009 Jan 3.

PMID:
19147174

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