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Items: 32


A systems biology approach uncovers a gene co-expression network associated with cell wall degradability in maize.

Cuello C, Baldy A, Brunaud V, Joets J, Delannoy E, Jacquemot MP, Botran L, Griveau Y, Guichard C, Soubigou-Taconnat L, Martin-Magniette ML, Leroy P, Méchin V, Reymond M, Coursol S.

PLoS One. 2019 Dec 31;14(12):e0227011. doi: 10.1371/journal.pone.0227011. eCollection 2019.


High throughput genotyping of structural variations in a complex plant genome using an original Affymetrix® axiom® array.

Mabire C, Duarte J, Darracq A, Pirani A, Rimbert H, Madur D, Combes V, Vitte C, Praud S, Rivière N, Joets J, Pichon JP, Nicolas SD.

BMC Genomics. 2019 Nov 13;20(1):848. doi: 10.1186/s12864-019-6136-9.


Unraveling the Developmental and Genetic Mechanisms Underpinning Floral Architecture in Proteaceae.

Damerval C, Citerne H, Conde E Silva N, Deveaux Y, Delannoy E, Joets J, Simonnet F, Staedler Y, Schönenberger J, Yansouni J, Le Guilloux M, Sauquet H, Nadot S.

Front Plant Sci. 2019 Jan 25;10:18. doi: 10.3389/fpls.2019.00018. eCollection 2019.


Assessing the Response of Small RNA Populations to Allopolyploidy Using Resynthesized Brassica napus Allotetraploids.

Martinez Palacios P, Jacquemot MP, Tapie M, Rousselet A, Diop M, Remoué C, Falque M, Lloyd A, Jenczewski E, Lassalle G, Chévre AM, Lelandais C, Crespi M, Brabant P, Joets J, Alix K.

Mol Biol Evol. 2019 Apr 1;36(4):709-726. doi: 10.1093/molbev/msz007.


Sequence analysis of European maize inbred line F2 provides new insights into molecular and chromosomal characteristics of presence/absence variants.

Darracq A, Vitte C, Nicolas S, Duarte J, Pichon JP, Mary-Huard T, Chevalier C, Bérard A, Le Paslier MC, Rogowsky P, Charcosset A, Joets J.

BMC Genomics. 2018 Feb 5;19(1):119. doi: 10.1186/s12864-018-4490-7.


Genomic and epigenomic immunity in common bean: the unusual features of NB-LRR gene family.

Richard MMS, Gratias A, Thareau V, Kim KD, Balzergue S, Joets J, Jackson SA, Geffroy V.

DNA Res. 2018 Apr 1;25(2):161-172. doi: 10.1093/dnares/dsx046.


Independent introductions and admixtures have contributed to adaptation of European maize and its American counterparts.

Brandenburg JT, Mary-Huard T, Rigaill G, Hearne SJ, Corti H, Joets J, Vitte C, Charcosset A, Nicolas SD, Tenaillon MI.

PLoS Genet. 2017 Mar 16;13(3):e1006666. doi: 10.1371/journal.pgen.1006666. eCollection 2017 Mar.


Introns Structure Patterns of Variation in Nucleotide Composition in Arabidopsis thaliana and Rice Protein-Coding Genes.

Ressayre A, Glémin S, Montalent P, Serre-Giardi L, Dillmann C, Joets J.

Genome Biol Evol. 2015 Oct 7;7(10):2913-28. doi: 10.1093/gbe/evv189.


OptiMAS: a decision support tool to conduct marker-assisted selection programs.

Valente F, Gauthier F, Bardol N, Blanc G, Joets J, Charcosset A, Moreau L.

Methods Mol Biol. 2014;1145:97-116. doi: 10.1007/978-1-4939-0446-4_9.


OptiMAS: a decision support tool for marker-assisted assembly of diverse alleles.

Valente F, Gauthier F, Bardol N, Blanc G, Joets J, Charcosset A, Moreau L.

J Hered. 2013 Jul-Aug;104(4):586-90. doi: 10.1093/jhered/est020. Epub 2013 Apr 10.


Management and dissemination of MS proteomic data with PROTICdb: example of a quantitative comparison between methods of protein extraction.

Langella O, Valot B, Jacob D, Balliau T, Flores R, Hoogland C, Joets J, Zivy M.

Proteomics. 2013 May;13(9):1457-66. doi: 10.1002/pmic.201200564. Epub 2013 Apr 5.


Allopolyploidy has a moderate impact on restructuring at three contrasting transposable element insertion sites in resynthesized Brassica napus allotetraploids.

Sarilar V, Palacios PM, Rousselet A, Ridel C, Falque M, Eber F, Chèvre AM, Joets J, Brabant P, Alix K.

New Phytol. 2013 Apr;198(2):593-604. doi: 10.1111/nph.12156. Epub 2013 Feb 6.


BioMercator V3: an upgrade of genetic map compilation and quantitative trait loci meta-analysis algorithms.

Sosnowski O, Charcosset A, Joets J.

Bioinformatics. 2012 Aug 1;28(15):2082-3. doi: 10.1093/bioinformatics/bts313. Epub 2012 Jun 1.


A large maize (Zea mays L.) SNP genotyping array: development and germplasm genotyping, and genetic mapping to compare with the B73 reference genome.

Ganal MW, Durstewitz G, Polley A, Bérard A, Buckler ES, Charcosset A, Clarke JD, Graner EM, Hansen M, Joets J, Le Paslier MC, McMullen MD, Montalent P, Rose M, Schön CC, Sun Q, Walter H, Martin OC, Falque M.

PLoS One. 2011;6(12):e28334. doi: 10.1371/journal.pone.0028334. Epub 2011 Dec 8.


Secretome of the free-living mycelium from the ectomycorrhizal basidiomycete Laccaria bicolor.

Vincent D, Kohler A, Claverol S, Solier E, Joets J, Gibon J, Lebrun MH, Plomion C, Martin F.

J Proteome Res. 2012 Jan 1;11(1):157-71. doi: 10.1021/pr200895f. Epub 2011 Nov 29.


BraSto, a Stowaway MITE from Brassica: recently active copies preferentially accumulate in the gene space.

Sarilar V, Marmagne A, Brabant P, Joets J, Alix K.

Plant Mol Biol. 2011 Sep;77(1-2):59-75. doi: 10.1007/s11103-011-9794-9. Epub 2011 May 28.


Guidelines for reporting the use of gel image informatics in proteomics.

Hoogland C, O'Gorman M, Bogard P, Gibson F, Berth M, Cockell SJ, Ekefjärd A, Forsstrom-Olsson O, Kapferer A, Nilsson M, Martínez-Bartolomé S, Albar JP, Echevarría-Zomeño S, Martínez-Gomariz M, Joets J, Binz PA, Taylor CF, Dowsey A, Jones AR; Minimum Information About a Proteomics Experiment (MIAPE).

Nat Biotechnol. 2010 Jul;28(7):655-6. doi: 10.1038/nbt0710-655. No abstract available.


EuGène-maize: a web site for maize gene prediction.

Montalent P, Joets J.

Bioinformatics. 2010 May 1;26(9):1254-5. doi: 10.1093/bioinformatics/btq123. Epub 2010 Apr 16.


Hunting down fungal secretomes using liquid-phase IEF prior to high resolution 2-DE.

Vincent D, Balesdent MH, Gibon J, Claverol S, Lapaillerie D, Lomenech AM, Blaise F, Rouxel T, Martin F, Bonneu M, Amselem J, Dominguez V, Howlett BJ, Wincker P, Joets J, Lebrun MH, Plomion C.

Electrophoresis. 2009 Dec;30(23):4118-36. doi: 10.1002/elps.200900415.


Contrasting evolutionary patterns and target specificities among three Tourist-like MITE families in the maize genome.

Zerjal T, Joets J, Alix K, Grandbastien MA, Tenaillon MI.

Plant Mol Biol. 2009 Sep;71(1-2):99-114. doi: 10.1007/s11103-009-9511-0. Epub 2009 Jun 17.


Comparative proteomics of leaf, stem, and root tissues of synthetic Brassica napus.

Albertin W, Langella O, Joets J, Négroni L, Zivy M, Damerval C, Thiellement H.

Proteomics. 2009 Feb;9(3):793-9. doi: 10.1002/pmic.200800479.


The CACTA transposon Bot1 played a major role in Brassica genome divergence and gene proliferation.

Alix K, Joets J, Ryder CD, Moore J, Barker GC, Bailey JP, King GJ, Pat Heslop-Harrison JS.

Plant J. 2008 Dec;56(6):1030-44. doi: 10.1111/j.1365-313X.2008.03660.x. Epub 2008 Aug 21.


Proteomic analysis reveals differences between Vitis vinifera L. cv. Chardonnay and cv. Cabernet Sauvignon and their responses to water deficit and salinity.

Vincent D, Ergül A, Bohlman MC, Tattersall EA, Tillett RL, Wheatley MD, Woolsey R, Quilici DR, Joets J, Schlauch K, Schooley DA, Cushman JC, Cramer GR.

J Exp Bot. 2007;58(7):1873-92. Epub 2007 Apr 18.


The PROTICdb database for 2-DE proteomics.

Langella O, Zivy M, Joets J.

Methods Mol Biol. 2007;355:279-303.


Linkage mapping of 1454 new maize candidate gene Loci.

Falque M, Décousset L, Dervins D, Jacob AM, Joets J, Martinant JP, Raffoux X, Ribière N, Ridel C, Samson D, Charcosset A, Murigneux A.

Genetics. 2005 Aug;170(4):1957-66. Epub 2005 Jun 3.


PROTICdb: a web-based application to store, track, query, and compare plant proteome data.

Ferry-Dumazet H, Houel G, Montalent P, Moreau L, Langella O, Negroni L, Vincent D, Lalanne C, de Daruvar A, Plomion C, Zivy M, Joets J.

Proteomics. 2005 May;5(8):2069-81.


Genetic architecture of flowering time in maize as inferred from quantitative trait loci meta-analysis and synteny conservation with the rice genome.

Chardon F, Virlon B, Moreau L, Falque M, Joets J, Decousset L, Murigneux A, Charcosset A.

Genetics. 2004 Dec;168(4):2169-85.


BioMercator: integrating genetic maps and QTL towards discovery of candidate genes.

Arcade A, Labourdette A, Falque M, Mangin B, Chardon F, Charcosset A, Joets J.

Bioinformatics. 2004 Sep 22;20(14):2324-6. Epub 2004 Apr 1.


ActionMap: A web-based software that automates loci assignments to framework maps.

Albini G, Falque M, Joets J.

Nucleic Acids Res. 2003 Jul 1;31(13):3815-8.


Interaction of per 3,6-anhydro-alpha cyclodextrins (alpha 36CD) and lead-alpha 36CD complex with biological systems.

Debouzy JC, Fauvelle F, Gadelle A, Baudin C, Richard M, Perly B, Chouteau F, Joets J, Tazz JJ, Daveloose D.

Boll Chim Farm. 1998 May;137(5):144-51.


Characterization of the Saccharomyces cerevisiae FMS1 gene related to Candida albicans corticosteroid-binding protein 1.

Joets J, Pousset D, Marcireau C, Karst F.

Curr Genet. 1996 Jul 31;30(2):115-20.


FEN2: a gene implicated in the catabolite repression-mediated regulation of ergosterol biosynthesis in yeast.

Marcireau C, Joets J, Pousset D, Guilloton M, Karst F.

Yeast. 1996 May;12(6):531-9.

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