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Transmission time delays organize the brain network synchronization.

Petkoski S, Jirsa VK.

Philos Trans A Math Phys Eng Sci. 2019 Sep 9;377(2153):20180132. doi: 10.1098/rsta.2018.0132. Epub 2019 Jul 22.


Differences in MEG and EEG power-law scaling explained by a coupling between spatial coherence and frequency: a simulation study.

Bénar CG, Grova C, Jirsa VK, Lina JM.

J Comput Neurosci. 2019 Jul 11. doi: 10.1007/s10827-019-00721-9. [Epub ahead of print]


The Human Brain Project-Synergy between neuroscience, computing, informatics, and brain-inspired technologies.

Amunts K, Knoll AC, Lippert T, Pennartz CMA, Ryvlin P, Destexhe A, Jirsa VK, D'Angelo E, Bjaalie JG.

PLoS Biol. 2019 Jul 1;17(7):e3000344. doi: 10.1371/journal.pbio.3000344. eCollection 2019 Jul.


Lifespan Changes in Network Structure and Network Topology Dynamics During Rest and Auditory Oddball Performance.

Müller V, Jirsa V, Perdikis D, Sleimen-Malkoun R, von Oertzen T, Lindenberger U.

Front Aging Neurosci. 2019 Jun 11;11:138. doi: 10.3389/fnagi.2019.00138. eCollection 2019.


Optimization of surgical intervention outside the epileptogenic zone in the Virtual Epileptic Patient (VEP).

An S, Bartolomei F, Guye M, Jirsa V.

PLoS Comput Biol. 2019 Jun 26;15(6):e1007051. doi: 10.1371/journal.pcbi.1007051. eCollection 2019 Jun.


The Scientific Case for Brain Simulations.

Einevoll GT, Destexhe A, Diesmann M, Grün S, Jirsa V, de Kamps M, Migliore M, Ness TV, Plesser HE, Schürmann F.

Neuron. 2019 May 22;102(4):735-744. doi: 10.1016/j.neuron.2019.03.027. Review.


Controlling seizure propagation in large-scale brain networks.

Olmi S, Petkoski S, Guye M, Bartolomei F, Jirsa V.

PLoS Comput Biol. 2019 Feb 25;15(2):e1006805. doi: 10.1371/journal.pcbi.1006805. eCollection 2019 Feb.


Phase-lags in large scale brain synchronization: Methodological considerations and in-silico analysis.

Petkoski S, Palva JM, Jirsa VK.

PLoS Comput Biol. 2018 Jul 10;14(7):e1006160. doi: 10.1371/journal.pcbi.1006160. eCollection 2018 Jul.


Predicting the spatiotemporal diversity of seizure propagation and termination in human focal epilepsy.

Proix T, Jirsa VK, Bartolomei F, Guye M, Truccolo W.

Nat Commun. 2018 Mar 14;9(1):1088. doi: 10.1038/s41467-018-02973-y.


Multiple Kernel Learning Model for Relating Structural and Functional Connectivity in the Brain.

Surampudi SG, Naik S, Surampudi RB, Jirsa VK, Sharma A, Roy D.

Sci Rep. 2018 Feb 19;8(1):3265. doi: 10.1038/s41598-018-21456-0.


Resting Brains Never Rest: Computational Insights into Potential Cognitive Architectures: (Trends in Neurosciences 36, 268-274, 2013).

Deco G, Jirsa VK, McIntosh AR.

Trends Neurosci. 2018 Mar;41(3):161. doi: 10.1016/j.tins.2017.12.007. Epub 2018 Jan 6. No abstract available.


Inferring multi-scale neural mechanisms with brain network modelling.

Schirner M, McIntosh AR, Jirsa V, Deco G, Ritter P.

Elife. 2018 Jan 8;7. pii: e28927. doi: 10.7554/eLife.28927.


MULAN: Evaluation and ensemble statistical inference for functional connectivity.

Wang HE, Friston KJ, Bénar CG, Woodman MM, Chauvel P, Jirsa V, Bernard C.

Neuroimage. 2018 Feb 1;166:167-184. doi: 10.1016/j.neuroimage.2017.10.036. Epub 2017 Oct 27.


Anatomic consistencies across epilepsies: a stereotactic-EEG informed high-resolution structural connectivity study.

Besson P, Bandt SK, Proix T, Lagarde S, Jirsa VK, Ranjeva JP, Bartolomei F, Guye M.

Brain. 2017 Oct 1;140(10):2639-2652. doi: 10.1093/brain/awx181.


Complementary contributions of concurrent EEG and fMRI connectivity for predicting structural connectivity.

Wirsich J, Ridley B, Besson P, Jirsa V, Bénar C, Ranjeva JP, Guye M.

Neuroimage. 2017 Nov 1;161:251-260. doi: 10.1016/j.neuroimage.2017.08.055. Epub 2017 Aug 24.


Fast-Slow Bursters in the Unfolding of a High Codimension Singularity and the Ultra-slow Transitions of Classes.

Saggio ML, Spiegler A, Bernard C, Jirsa VK.

J Math Neurosci. 2017 Dec;7(1):7. doi: 10.1186/s13408-017-0050-8. Epub 2017 Jul 25.


The Virtual Mouse Brain: A Computational Neuroinformatics Platform to Study Whole Mouse Brain Dynamics.

Melozzi F, Woodman MM, Jirsa VK, Bernard C.

eNeuro. 2017 Jun 28;4(3). pii: ENEURO.0111-17.2017. doi: 10.1523/ENEURO.0111-17.2017. eCollection 2017 May-Jun.


The dynamics of resting fluctuations in the brain: metastability and its dynamical cortical core.

Deco G, Kringelbach ML, Jirsa VK, Ritter P.

Sci Rep. 2017 Jun 8;7(1):3095. doi: 10.1038/s41598-017-03073-5.


Ebbinghaus figures that deceive the eye do not necessarily deceive the hand.

Knol H, Huys R, Sarrazin JC, Spiegler A, Jirsa VK.

Sci Rep. 2017 Jun 8;7(1):3111. doi: 10.1038/s41598-017-02925-4.


Symmetry Breaking in Space-Time Hierarchies Shapes Brain Dynamics and Behavior.

Pillai AS, Jirsa VK.

Neuron. 2017 Jun 7;94(5):1010-1026. doi: 10.1016/j.neuron.2017.05.013. Review.


Defining epileptogenic networks: Contribution of SEEG and signal analysis.

Bartolomei F, Lagarde S, Wendling F, McGonigal A, Jirsa V, Guye M, Bénar C.

Epilepsia. 2017 Jul;58(7):1131-1147. doi: 10.1111/epi.13791. Epub 2017 May 20. Review.


Individual brain structure and modelling predict seizure propagation.

Proix T, Bartolomei F, Guye M, Jirsa VK.

Brain. 2017 Mar 1;140(3):641-654. doi: 10.1093/brain/awx004.


Dynamical signatures of isometric force control as a function of age, expertise, and task constraints.

Vieluf S, Sleimen-Malkoun R, Voelcker-Rehage C, Jirsa V, Reuter EM, Godde B, Temprado JJ, Huys R.

J Neurophysiol. 2017 Jul 1;118(1):176-186. doi: 10.1152/jn.00691.2016. Epub 2017 Mar 29.


[What can we expect from clinical trials in psychiatry?]

Marsot A, Boucherie Q, Kheloufi F, Riff C, Braunstein D, Dupouey J, Guilhaumou R, Zendjidjian X, Bonin-Guillaume S, Fakra E, Guye M, Jirsa V, Azorin JM, Belzeaux R, Adida M, Micallef J, Blin O.

Encephale. 2016 Dec;42(6S):S2-S6. doi: 10.1016/S0013-7006(17)30046-5. French.


Structure and Topology Dynamics of Hyper-Frequency Networks during Rest and Auditory Oddball Performance.

Müller V, Perdikis D, von Oertzen T, Sleimen-Malkoun R, Jirsa V, Lindenberger U.

Front Comput Neurosci. 2016 Oct 17;10:108. eCollection 2016.


The multiscale entropy: Guidelines for use and interpretation in brain signal analysis.

Courtiol J, Perdikis D, Petkoski S, Müller V, Huys R, Sleimen-Malkoun R, Jirsa VK.

J Neurosci Methods. 2016 Nov 1;273:175-190. doi: 10.1016/j.jneumeth.2016.09.004. Epub 2016 Sep 14.


Selective Activation of Resting-State Networks following Focal Stimulation in a Connectome-Based Network Model of the Human Brain.

Spiegler A, Hansen EC, Bernard C, McIntosh AR, Jirsa VK.

eNeuro. 2016 Oct 6;3(5). pii: ENEURO.0068-16.2016. eCollection 2016 Sep-Oct. Erratum in: eNeuro. 2016 Oct 31;3(5):.


Heterogeneity of time delays determines synchronization of coupled oscillators.

Petkoski S, Spiegler A, Proix T, Aram P, Temprado JJ, Jirsa VK.

Phys Rev E. 2016 Jul;94(1-1):012209. doi: 10.1103/PhysRevE.94.012209. Epub 2016 Jul 11.


Analytical Operations Relate Structural and Functional Connectivity in the Brain.

Saggio ML, Ritter P, Jirsa VK.

PLoS One. 2016 Aug 18;11(8):e0157292. doi: 10.1371/journal.pone.0157292. eCollection 2016.


Resting state brain dynamics and its transients: a combined TMS-EEG study.

Bonnard M, Chen S, Gaychet J, Carrere M, Woodman M, Giusiano B, Jirsa V.

Sci Rep. 2016 Aug 4;6:31220. doi: 10.1038/srep31220.


How do parcellation size and short-range connectivity affect dynamics in large-scale brain network models?

Proix T, Spiegler A, Schirner M, Rothmeier S, Ritter P, Jirsa VK.

Neuroimage. 2016 Nov 15;142:135-149. doi: 10.1016/j.neuroimage.2016.06.016. Epub 2016 Jul 30.


The Virtual Epileptic Patient: Individualized whole-brain models of epilepsy spread.

Jirsa VK, Proix T, Perdikis D, Woodman MM, Wang H, Gonzalez-Martinez J, Bernard C, Bénar C, Guye M, Chauvel P, Bartolomei F.

Neuroimage. 2017 Jan 15;145(Pt B):377-388. doi: 10.1016/j.neuroimage.2016.04.049. Epub 2016 Jul 28. Review.


Whole-brain analytic measures of network communication reveal increased structure-function correlation in right temporal lobe epilepsy.

Wirsich J, Perry A, Ridley B, Proix T, Golos M, Bénar C, Ranjeva JP, Bartolomei F, Breakspear M, Jirsa V, Guye M.

Neuroimage Clin. 2016 May 19;11:707-718. doi: 10.1016/j.nicl.2016.05.010. eCollection 2016.


Functional coordination of muscles underlying changes in behavioural dynamics.

Vernooij CA, Rao G, Perdikis D, Huys R, Jirsa VK, Temprado JJ.

Sci Rep. 2016 Jun 10;6:27759. doi: 10.1038/srep27759.


A new neuroinformatics approach to personalized medicine in neurology: The Virtual Brain.

Falcon MI, Jirsa V, Solodkin A.

Curr Opin Neurol. 2016 Aug;29(4):429-36. doi: 10.1097/WCO.0000000000000344. Review.


Functional Mechanisms of Recovery after Chronic Stroke: Modeling with the Virtual Brain.

Falcon MI, Riley JD, Jirsa V, McIntosh AR, Chen EE, Solodkin A.

eNeuro. 2016 Apr 4;3(2). pii: ENEURO.0158-15.2016. doi: 10.1523/ENEURO.0158-15.2016. eCollection 2016 Mar-Apr.


Towards a Pathway Inventory of the Human Brain for Modeling Disease Mechanisms Underlying Neurodegeneration.

Iyappan A, Gündel M, Shahid M, Wang J, Li H, Mevissen HT, Müller B, Fluck J, Jirsa V, Domide L, Younesi E, Hofmann-Apitius M.

J Alzheimers Dis. 2016 Apr 12;52(4):1343-60. doi: 10.3233/JAD-151178.


Transcranial direct current stimulation changes resting state functional connectivity: A large-scale brain network modeling study.

Kunze T, Hunold A, Haueisen J, Jirsa V, Spiegler A.

Neuroimage. 2016 Oct 15;140:174-87. doi: 10.1016/j.neuroimage.2016.02.015. Epub 2016 Feb 13.


Visually Evoked Spiking Evolves While Spontaneous Ongoing Dynamics Persist.

Huys R, Jirsa VK, Darokhan Z, Valentiniene S, Roland PE.

Front Syst Neurosci. 2016 Jan 8;9:183. doi: 10.3389/fnsys.2015.00183. eCollection 2015.


Multistability in Large Scale Models of Brain Activity.

Golos M, Jirsa V, Daucé E.

PLoS Comput Biol. 2015 Dec 28;11(12):e1004644. doi: 10.1371/journal.pcbi.1004644. eCollection 2015 Dec.


TVB-EduPack-An Interactive Learning and Scripting Platform for The Virtual Brain.

Matzke H, Schirner M, Vollbrecht D, Rothmeier S, Llarena A, Rojas R, Triebkorn P, Domide L, Mersmann J, Solodkin A, Jirsa VK, McIntosh AR, Ritter P.

Front Neuroinform. 2015 Nov 25;9:27. doi: 10.3389/fninf.2015.00027. eCollection 2015.


Quantifying the Ebbinghaus figure effect: target size, context size, and target-context distance determine the presence and direction of the illusion.

Knol H, Huys R, Sarrazin JC, Jirsa VK.

Front Psychol. 2015 Nov 4;6:1679. doi: 10.3389/fpsyg.2015.01679. eCollection 2015.


The Virtual Brain: Modeling Biological Correlates of Recovery after Chronic Stroke.

Falcon MI, Riley JD, Jirsa V, McIntosh AR, Shereen AD, Chen EE, Solodkin A.

Front Neurol. 2015 Nov 2;6:228. doi: 10.3389/fneur.2015.00228. eCollection 2015.


Brain Dynamics of Aging: Multiscale Variability of EEG Signals at Rest and during an Auditory Oddball Task

Sleimen-Malkoun R, Perdikis D, Müller V, Blanc JL, Huys R, Temprado JJ, Jirsa VK.

eNeuro. 2015 Jun 3;2(3). pii: ENEURO.0067-14.2015. doi: 10.1523/ENEURO.0067-14.2015. eCollection 2015 May-Jun.


The Rediscovery of Slowness: Exploring the Timing of Cognition.

Kringelbach ML, McIntosh AR, Ritter P, Jirsa VK, Deco G.

Trends Cogn Sci. 2015 Oct;19(10):616-628. doi: 10.1016/j.tics.2015.07.011. Review.


Characterization of Cortical Networks and Corticocortical Functional Connectivity Mediating Arbitrary Visuomotor Mapping.

Brovelli A, Chicharro D, Badier JM, Wang H, Jirsa V.

J Neurosci. 2015 Sep 16;35(37):12643-58. doi: 10.1523/JNEUROSCI.4892-14.2015.


Relating Alpha Power and Phase to Population Firing and Hemodynamic Activity Using a Thalamo-cortical Neural Mass Model.

Becker R, Knock S, Ritter P, Jirsa V.

PLoS Comput Biol. 2015 Sep 3;11(9):e1004352. doi: 10.1371/journal.pcbi.1004352. eCollection 2015 Sep.


Editorial: State-dependent brain computation.

Ritter P, Jirsa VK, McIntosh AR, Breakspear M.

Front Comput Neurosci. 2015 Jun 23;9:77. doi: 10.3389/fncom.2015.00077. eCollection 2015. No abstract available.


Computational modeling of seizure dynamics using coupled neuronal networks: factors shaping epileptiform activity.

Naze S, Bernard C, Jirsa V.

PLoS Comput Biol. 2015 May 13;11(5):e1004209. doi: 10.1371/journal.pcbi.1004209. eCollection 2015 May.


Effects of task and age on the magnitude and structure of force fluctuations: insights into underlying neuro-behavioral processes.

Vieluf S, Temprado JJ, Berton E, Jirsa VK, Sleimen-Malkoun R.

BMC Neurosci. 2015 Mar 13;16:12. doi: 10.1186/s12868-015-0153-7.

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