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Items: 44

1.

Engineering Translational Resource Allocation Controllers: Mechanistic Models, Design Guidelines, and Potential Biological Implementations.

Darlington APS, Kim J, Jiménez JI, Bates DG.

ACS Synth Biol. 2018 Nov 16;7(11):2485-2496. doi: 10.1021/acssynbio.8b00029. Epub 2018 Oct 22.

PMID:
30346148
2.

Zika virus: Report from the task force on tropical diseases by the world Federation of Societies of intensive and critical care medicine.

Silva GS, Richards GA, Baker T, Hidalgo J, Jiménez JIS, Amin P; Council of the World Federation of Societies of Intensive and Critical Care Medicine.

J Crit Care. 2018 Aug;46:106-109. doi: 10.1016/j.jcrc.2018.03.030. Epub 2018 Apr 5.

PMID:
29779827
3.

Chikungunya: Report from the task force on tropical diseases by the World Federation of Societies of intensive and critical care medicine.

Amin P, Silva GS, Hidalgo J, Jiménez JIS, Karnad DR, Richards GA.

J Crit Care. 2018 Aug;46:110-114. doi: 10.1016/j.jcrc.2018.04.004. Epub 2018 Apr 7.

PMID:
29678361
4.

Dynamic allocation of orthogonal ribosomes facilitates uncoupling of co-expressed genes.

Darlington APS, Kim J, Jiménez JI, Bates DG.

Nat Commun. 2018 Feb 15;9(1):695. doi: 10.1038/s41467-018-02898-6.

5.

Dengue fever: Report from the task force on tropical diseases by the World Federation of Societies of Intensive and Critical Care Medicine.

Amin P, Acicbe Ö, Hidalgo J, Jiménez JIS, Baker T, Richards GA.

J Crit Care. 2018 Feb;43:346-351. doi: 10.1016/j.jcrc.2017.11.003. Epub 2017 Nov 5. Review.

PMID:
29221616
6.

Leptospirosis: Report from the task force on tropical diseases by the World Federation of Societies of Intensive and Critical Care Medicine.

Jiménez JIS, Marroquin JLH, Richards GA, Amin P.

J Crit Care. 2018 Feb;43:361-365. doi: 10.1016/j.jcrc.2017.11.005. Epub 2017 Nov 10. Review.

PMID:
29129539
7.

Viral hemorrhagic fever in the tropics: Report from the task force on tropical diseases by the World Federation of Societies of Intensive and Critical Care Medicine.

Hidalgo J, Richards GA, Jiménez JIS, Baker T, Amin P.

J Crit Care. 2017 Dec;42:366-372. doi: 10.1016/j.jcrc.2017.11.006. Epub 2017 Nov 4. Review.

PMID:
29128377
8.

Geo-economic variations in epidemiology, patterns of care, and outcomes in patients with acute respiratory distress syndrome: insights from the LUNG SAFE prospective cohort study.

Laffey JG, Madotto F, Bellani G, Pham T, Fan E, Brochard L, Amin P, Arabi Y, Bajwa EK, Bruhn A, Cerny V, Clarkson K, Heunks L, Kurahashi K, Laake JH, Lorente JA, McNamee L, Nin N, Palo JE, Piquilloud L, Qiu H, Jiménez JIS, Esteban A, McAuley DF, van Haren F, Ranieri M, Rubenfeld G, Wrigge H, Slutsky AS, Pesenti A; LUNG SAFE Investigators; ESICM Trials Group.

Lancet Respir Med. 2017 Aug;5(8):627-638. doi: 10.1016/S2213-2600(17)30213-8. Epub 2017 Jun 15.

PMID:
28624388
9.

Cooperation in microbial communities and their biotechnological applications.

Cavaliere M, Feng S, Soyer OS, Jiménez JI.

Environ Microbiol. 2017 Aug;19(8):2949-2963. doi: 10.1111/1462-2920.13767. Epub 2017 May 29. Review.

10.

Resource Competition Shapes the Response of Genetic Circuits.

Qian Y, Huang HH, Jiménez JI, Del Vecchio D.

ACS Synth Biol. 2017 Jul 21;6(7):1263-1272. doi: 10.1021/acssynbio.6b00361. Epub 2017 Apr 3.

PMID:
28350160
11.

Shedding light on the black box models of the cell.

Jiménez JI.

Microb Biotechnol. 2017 Jan;10(1):43-45. doi: 10.1111/1751-7915.12489. Epub 2017 Jan 3. No abstract available.

12.

Properties of alternative microbial hosts used in synthetic biology: towards the design of a modular chassis.

Kim J, Salvador M, Saunders E, González J, Avignone-Rossa C, Jiménez JI.

Essays Biochem. 2016 Nov 30;60(4):303-313. Review.

13.

Production of selenium nanoparticles in Pseudomonas putida KT2440.

Avendaño R, Chaves N, Fuentes P, Sánchez E, Jiménez JI, Chavarría M.

Sci Rep. 2016 Nov 15;6:37155. doi: 10.1038/srep37155.

14.

Computational analysis of fitness landscapes and evolutionary networks from in vitro evolution experiments.

Xulvi-Brunet R, Campbell GW, Rajamani S, Jiménez JI, Chen IA.

Methods. 2016 Aug 15;106:86-96. doi: 10.1016/j.ymeth.2016.05.012. Epub 2016 May 19.

PMID:
27211010
15.

Isocost Lines Describe the Cellular Economy of Genetic Circuits.

Gyorgy A, Jiménez JI, Yazbek J, Huang HH, Chung H, Weiss R, Del Vecchio D.

Biophys J. 2015 Aug 4;109(3):639-46. doi: 10.1016/j.bpj.2015.06.034.

16.

Phenotypic knockouts of selected metabolic pathways by targeting enzymes with camel-derived nanobodies (V(HH)s).

Jiménez JI, Fraile S, Zafra O, de Lorenzo V.

Metab Eng. 2015 Jul;30:40-48. doi: 10.1016/j.ymben.2015.04.002. Epub 2015 Apr 15.

PMID:
25887637
17.

Genetic drift suppresses bacterial conjugation in spatially structured populations.

Freese PD, Korolev KS, Jiménez JI, Chen IA.

Biophys J. 2014 Feb 18;106(4):944-54. doi: 10.1016/j.bpj.2014.01.012.

18.

A second chromosomal copy of the catA gene endows Pseudomonas putida mt-2 with an enzymatic safety valve for excess of catechol.

Jiménez JI, Pérez-Pantoja D, Chavarría M, Díaz E, de Lorenzo V.

Environ Microbiol. 2014 Jun;16(6):1767-78. doi: 10.1111/1462-2920.12361. Epub 2014 Jan 21.

19.

Comprehensive experimental fitness landscape and evolutionary network for small RNA.

Jiménez JI, Xulvi-Brunet R, Campbell GW, Turk-MacLeod R, Chen IA.

Proc Natl Acad Sci U S A. 2013 Sep 10;110(37):14984-9. doi: 10.1073/pnas.1307604110. Epub 2013 Aug 26.

20.

NanoPad: an integrated platform for bacterial production of camel nanobodies aimed at detecting environmental biomarkers.

Fraile S, Jiménez JI, Gutiérrez C, de Lorenzo V.

Proteomics. 2013 Oct;13(18-19):2766-75. doi: 10.1002/pmic.201300009. Epub 2013 Jun 18.

PMID:
23661305
21.

Aerobic degradation of aromatic compounds.

Díaz E, Jiménez JI, Nogales J.

Curr Opin Biotechnol. 2013 Jun;24(3):431-42. doi: 10.1016/j.copbio.2012.10.010. Epub 2012 Nov 1. Review.

PMID:
23122741
22.

Daedalols A-C, fungal-derived BACE1 inhibitors.

Sorribas A, Jiménez JI, Yoshida WY, Williams PG.

Bioorg Med Chem. 2011 Nov 15;19(22):6581-6. doi: 10.1016/j.bmc.2011.09.029. Epub 2011 Sep 22.

23.

Stictamides A-C, MMP12 inhibitors containing 4-amino-3-hydroxy-5-phenylpentanoic acid subunits.

Liang Z, Sorribas A, Sulzmaier FJ, Jiménez JI, Wang X, Sauvage T, Yoshida WY, Wang G, Ramos JW, Williams PG.

J Org Chem. 2011 May 20;76(10):3635-43. doi: 10.1021/jo200241h. Epub 2011 Apr 18.

24.

A finely tuned regulatory circuit of the nicotinic acid degradation pathway in Pseudomonas putida.

Jiménez JI, Juárez JF, García JL, Díaz E.

Environ Microbiol. 2011 Jul;13(7):1718-32. doi: 10.1111/j.1462-2920.2011.02471.x. Epub 2011 Mar 30.

PMID:
21450002
25.

Monitoring biodegradative enzymes with nanobodies raised in Camelus dromedarius with mixtures of catabolic proteins.

Zafra O, Fraile S, Gutiérrez C, Haro A, Páez-Espino AD, Jiménez JI, de Lorenzo V.

Environ Microbiol. 2011 Apr;13(4):960-74. doi: 10.1111/j.1462-2920.2010.02401.x. Epub 2011 Jan 10.

PMID:
21219561
26.

A preliminary crystallographic study of recombinant NicX, an Fe(2+)-dependent 2,5-dihydroxypyridine dioxygenase from Pseudomonas putida KT2440.

Jiménez JI, Acebrón I, García JL, Díaz E, Mancheño JM.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 May 1;66(Pt 5):549-53. doi: 10.1107/S174430911001119X. Epub 2010 Apr 29.

27.

Dictazoles: potential vinyl cyclobutane biosynthetic precursors to the dictazolines.

Dai J, Jiménez JI, Kelly M, Williams PG.

J Org Chem. 2010 Apr 2;75(7):2399-402. doi: 10.1021/jo902566n.

28.

[Cholecystolithotomy: first middle-long term results of our series].

Roqués JL, Pruneda RR, Sánchez J, Girón O, Aranda MJ, Trujillo A, Hernández JP, Guirao MJ, Zambudio G, Jiménez JI.

Cir Pediatr. 2009 Jul;22(3):153-6. Spanish.

PMID:
19957865
29.

Halogenated fatty acid amides and cyclic depsipeptides from an eastern Caribbean collection of the cyanobacterium Lyngbya majuscula.

Jiménez JI, Vansach T, Yoshida WY, Sakamoto B, Pörzgen P, Horgen FD.

J Nat Prod. 2009 Sep;72(9):1573-8. doi: 10.1021/np900173d.

30.

[Complete lower urinary tract duplication with true diphallia associated to anorrectal and neural malformations].

Guirao MJ, Zambudio G, Nortes L, Jiménez JI.

Cir Pediatr. 2008 Oct;21(4):235-7. Spanish.

PMID:
18998376
31.

Deciphering the genetic determinants for aerobic nicotinic acid degradation: the nic cluster from Pseudomonas putida KT2440.

Jiménez JI, Canales A, Jiménez-Barbero J, Ginalski K, Rychlewski L, García JL, Díaz E.

Proc Natl Acad Sci U S A. 2008 Aug 12;105(32):11329-34. doi: 10.1073/pnas.0802273105. Epub 2008 Aug 4.

32.

Dictazolines A and B, bisspiroimidazolidinones from the marine sponge Smenospongia cerebriformis.

Dai J, Jiménez JI, Kelly M, Barnes S, Lorenzo P, Williams P.

J Nat Prod. 2008 Jul;71(7):1287-90. doi: 10.1021/np8001018. Epub 2008 Jun 12.

33.

Potential of the volatile-producing fungus Muscodor albus for control of building molds.

Mercier J, Jiménez JI.

Can J Microbiol. 2007 Mar;53(3):404-10.

PMID:
17538650
34.

Growth phase-dependent expression of the Pseudomonas putida KT2440 transcriptional machinery analysed with a genome-wide DNA microarray.

Yuste L, Hervás AB, Canosa I, Tobes R, Jiménez JI, Nogales J, Pérez-Pérez MM, Santero E, Díaz E, Ramos JL, de Lorenzo V, Rojo F.

Environ Microbiol. 2006 Jan;8(1):165-77.

PMID:
16343331
35.

Jusbetonin, the first indolo[3,2-b]quinoline alkaloid glycoside, from Justicia betonica.

Subbaraju GV, Kavitha J, Rajasekhar D, Jimenez JI.

J Nat Prod. 2004 Mar;67(3):461-2.

PMID:
15043432
36.

Genomic analysis of the aromatic catabolic pathways from Pseudomonas putida KT2440.

Jiménez JI, Miñambres B, García JL, Díaz E.

Environ Microbiol. 2002 Dec;4(12):824-41.

PMID:
12534466
37.

Structure and absolute stereochemistry of hectochlorin, a potent stimulator of actin assembly.

Marquez BL, Watts KS, Yokochi A, Roberts MA, Verdier-Pinard P, Jimenez JI, Hamel E, Scheuer PJ, Gerwick WH.

J Nat Prod. 2002 Jun;65(6):866-71.

PMID:
12088429
38.

New lipopeptides from the Caribbean cyanobacterium Lyngbya majuscula.

Jiménez JI, Scheuer PJ.

J Nat Prod. 2001 Feb;64(2):200-3.

PMID:
11430000
39.

'Upenamide: An unprecedented macrocyclic alkaloid from the Indonesian sponge Echinochalina sp.

Jiménez JI, Goetz G, Mau CM, Yoshida WY, Scheuer PJ, Williamson RT, Kelly M.

J Org Chem. 2000 Dec 15;65(25):8465-9.

PMID:
11112565
40.

Scalarane-based sesterterpenes from an Indonesian sponge Strepsichordaia aliena.

Jiménez JI, Yoshida WY, Scheuer PJ, Kelly M.

J Nat Prod. 2000 Oct;63(10):1388-92.

PMID:
11076559
41.

Honulactones: new bishomoscalarane sesterterpenes from the Indonesian sponge Strepsichordaia aliena.

Jiménez JI, Yoshida WY, Scheuer PJ, Lobkovsky E, Clardy J, Kelly M.

J Org Chem. 2000 Oct 20;65(21):6837-40.

PMID:
11030999
42.

Oxidized welwitindolinones from terrestrial fischerella spp

Jimenez JI, Huber U, Moore RE and, Patterson GM.

J Nat Prod. 1999 Jun;62(6):940. No abstract available.

PMID:
10395527
43.

Oxidized welwitindolinones from terrestrial fischerella spp

Jimenez JI, Huber U, Moore RE, Patterson GM.

J Nat Prod. 1999 Apr;62(4):569-72.

PMID:
10217710
44.

A simple method of securing connectors to the heads of animals for EEG recordings.

JIMENEZ JI, ESCOBAR I.

Electroencephalogr Clin Neurophysiol. 1963 Feb;15:123-4. No abstract available.

PMID:
13957756

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