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Items: 38

1.

A continuous genome assembly of the corkwing wrasse (Symphodus melops).

Mattingsdal M, Jentoft S, Tørresen OK, Knutsen H, Hansen MM, Robalo JI, Zagrodzka Z, André C, Gonzalez EB.

Genomics. 2018 Apr 14. pii: S0888-7543(18)30038-7. doi: 10.1016/j.ygeno.2018.04.009. [Epub ahead of print]

PMID:
29665418
2.

Genomic architecture of haddock (Melanogrammus aeglefinus) shows expansions of innate immune genes and short tandem repeats.

Tørresen OK, Brieuc MSO, Solbakken MH, Sørhus E, Nederbragt AJ, Jakobsen KS, Meier S, Edvardsen RB, Jentoft S.

BMC Genomics. 2018 Apr 10;19(1):240. doi: 10.1186/s12864-018-4616-y.

3.

Loss of stomach, loss of appetite? Sequencing of the ballan wrasse (Labrus bergylta) genome and intestinal transcriptomic profiling illuminate the evolution of loss of stomach function in fish.

Lie KK, Tørresen OK, Solbakken MH, Rønnestad I, Tooming-Klunderud A, Nederbragt AJ, Jentoft S, Sæle Ø.

BMC Genomics. 2018 Mar 6;19(1):186. doi: 10.1186/s12864-018-4570-8.

4.

De novo gene evolution of antifreeze glycoproteins in codfishes revealed by whole genome sequence data.

Baalsrud HT, Tørresen OK, Hongrø Solbakken M, Salzburger W, Hanel R, Jakobsen KS, Jentoft S.

Mol Biol Evol. 2017 Dec 5. doi: 10.1093/molbev/msx311. [Epub ahead of print]

5.

Trans-oceanic genomic divergence of Atlantic cod ecotypes is associated with large inversions.

Berg PR, Star B, Pampoulie C, Bradbury IR, Bentzen P, Hutchings JA, Jentoft S, Jakobsen KS.

Heredity (Edinb). 2017 Dec;119(6):418-428. doi: 10.1038/hdy.2017.54. Epub 2017 Sep 20.

6.

Evolution of Hemoglobin Genes in Codfishes Influenced by Ocean Depth.

Baalsrud HT, Voje KL, Tørresen OK, Solbakken MH, Matschiner M, Malmstrøm M, Hanel R, Salzburger W, Jakobsen KS, Jentoft S.

Sci Rep. 2017 Aug 11;7(1):7956. doi: 10.1038/s41598-017-08286-2.

7.

Ancient DNA reveals the Arctic origin of Viking Age cod from Haithabu, Germany.

Star B, Boessenkool S, Gondek AT, Nikulina EA, Hufthammer AK, Pampoulie C, Knutsen H, André C, Nistelberger HM, Dierking J, Petereit C, Heinrich D, Jakobsen KS, Stenseth NC, Jentoft S, Barrett JH.

Proc Natl Acad Sci U S A. 2017 Aug 22;114(34):9152-9157. doi: 10.1073/pnas.1710186114. Epub 2017 Aug 7.

8.

Genome architecture enables local adaptation of Atlantic cod despite high connectivity.

Barth JMI, Berg PR, Jonsson PR, Bonanomi S, Corell H, Hemmer-Hansen J, Jakobsen KS, Johannesson K, Jorde PE, Knutsen H, Moksnes PO, Star B, Stenseth NC, Svedäng H, Jentoft S, André C.

Mol Ecol. 2017 Sep;26(17):4452-4466. doi: 10.1111/mec.14207. Epub 2017 Jul 19.

PMID:
28626905
9.

Linking species habitat and past palaeoclimatic events to evolution of the teleost innate immune system.

Solbakken MH, Voje KL, Jakobsen KS, Jentoft S.

Proc Biol Sci. 2017 Apr 26;284(1853). pii: 20162810. doi: 10.1098/rspb.2016.2810.

10.

Genomic differentiation and demographic histories of Atlantic and Indo-Pacific yellowfin tuna (Thunnus albacares) populations.

Barth JMI, Damerau M, Matschiner M, Jentoft S, Hanel R.

Genome Biol Evol. 2017 Apr 13. doi: 10.1093/gbe/evx067. [Epub ahead of print]

11.

Novel adverse outcome pathways revealed by chemical genetics in a developing marine fish.

Sørhus E, Incardona JP, Furmanek T, Goetz GW, Scholz NL, Meier S, Edvardsen RB, Jentoft S.

Elife. 2017 Jan 24;6. pii: e20707. doi: 10.7554/eLife.20707.

12.

An improved genome assembly uncovers prolific tandem repeats in Atlantic cod.

Tørresen OK, Star B, Jentoft S, Reinar WB, Grove H, Miller JR, Walenz BP, Knight J, Ekholm JM, Peluso P, Edvardsen RB, Tooming-Klunderud A, Skage M, Lien S, Jakobsen KS, Nederbragt AJ.

BMC Genomics. 2017 Jan 18;18(1):95. doi: 10.1186/s12864-016-3448-x.

13.

Whole genome sequencing data and de novo draft assemblies for 66 teleost species.

Malmstrøm M, Matschiner M, Tørresen OK, Jakobsen KS, Jentoft S.

Sci Data. 2017 Jan 17;4:160132. doi: 10.1038/sdata.2016.132.

14.

Successive Losses of Central Immune Genes Characterize the Gadiformes' Alternate Immunity.

Solbakken MH, Rise ML, Jakobsen KS, Jentoft S.

Genome Biol Evol. 2016 Dec 31;8(11):3508-3515. doi: 10.1093/gbe/evw250.

15.

Evolution of the immune system influences speciation rates in teleost fishes.

Malmstrøm M, Matschiner M, Tørresen OK, Star B, Snipen LG, Hansen TF, Baalsrud HT, Nederbragt AJ, Hanel R, Salzburger W, Stenseth NC, Jakobsen KS, Jentoft S.

Nat Genet. 2016 Oct;48(10):1204-10. doi: 10.1038/ng.3645. Epub 2016 Aug 22.

PMID:
27548311
16.

Crude oil exposures reveal roles for intracellular calcium cycling in haddock craniofacial and cardiac development.

Sørhus E, Incardona JP, Karlsen Ø, Linbo T, Sørensen L, Nordtug T, van der Meeren T, Thorsen A, Thorbjørnsen M, Jentoft S, Edvardsen RB, Meier S.

Sci Rep. 2016 Aug 10;6:31058. doi: 10.1038/srep31058.

17.

Genomic characterization of the Atlantic cod sex-locus.

Star B, Tørresen OK, Nederbragt AJ, Jakobsen KS, Pampoulie C, Jentoft S.

Sci Rep. 2016 Aug 8;6:31235. doi: 10.1038/srep31235.

18.

Genomics of speciation and introgression in Princess cichlid fishes from Lake Tanganyika.

Gante HF, Matschiner M, Malmstrøm M, Jakobsen KS, Jentoft S, Salzburger W.

Mol Ecol. 2016 Dec;25(24):6143-6161. doi: 10.1111/mec.13767. Epub 2016 Aug 26.

PMID:
27452499
19.

Long live the alien: is high genetic diversity a pivotal aspect of crested porcupine (Hystrix cristata) long-lasting and successful invasion?

Trucchi E, Facon B, Gratton P, Mori E, Stenseth NC, Jentoft S.

Mol Ecol. 2016 Aug;25(15):3527-39. doi: 10.1111/mec.13698. Epub 2016 Jun 30.

PMID:
27171527
20.

Evolutionary redesign of the Atlantic cod (Gadus morhua L.) Toll-like receptor repertoire by gene losses and expansions.

Solbakken MH, Tørresen OK, Nederbragt AJ, Seppola M, Gregers TF, Jakobsen KS, Jentoft S.

Sci Rep. 2016 Apr 29;6:25211. doi: 10.1038/srep25211.

21.

The Atlantic salmon genome provides insights into rediploidization.

Lien S, Koop BF, Sandve SR, Miller JR, Kent MP, Nome T, Hvidsten TR, Leong JS, Minkley DR, Zimin A, Grammes F, Grove H, Gjuvsland A, Walenz B, Hermansen RA, von Schalburg K, Rondeau EB, Di Genova A, Samy JK, Olav Vik J, Vigeland MD, Caler L, Grimholt U, Jentoft S, Våge DI, de Jong P, Moen T, Baranski M, Palti Y, Smith DR, Yorke JA, Nederbragt AJ, Tooming-Klunderud A, Jakobsen KS, Jiang X, Fan D, Hu Y, Liberles DA, Vidal R, Iturra P, Jones SJ, Jonassen I, Maass A, Omholt SW, Davidson WS.

Nature. 2016 May 12;533(7602):200-5. doi: 10.1038/nature17164. Epub 2016 Apr 18.

PMID:
27088604
22.

"Islands of Divergence" in the Atlantic Cod Genome Represent Polymorphic Chromosomal Rearrangements.

Sodeland M, Jorde PE, Lien S, Jentoft S, Berg PR, Grove H, Kent MP, Arnyasi M, Olsen EM, Knutsen H.

Genome Biol Evol. 2016 Apr 11;8(4):1012-22. doi: 10.1093/gbe/evw057.

23.

Three chromosomal rearrangements promote genomic divergence between migratory and stationary ecotypes of Atlantic cod.

Berg PR, Star B, Pampoulie C, Sodeland M, Barth JM, Knutsen H, Jakobsen KS, Jentoft S.

Sci Rep. 2016 Mar 17;6:23246. doi: 10.1038/srep23246.

24.

Developmental transcriptomics in Atlantic haddock: Illuminating pattern formation and organogenesis in non-model vertebrates.

Sørhus E, Incardona JP, Furmanek T, Jentoft S, Meier S, Edvardsen RB.

Dev Biol. 2016 Mar 15;411(2):301-313. doi: 10.1016/j.ydbio.2016.02.012. Epub 2016 Feb 12.

25.

Adaptation to Low Salinity Promotes Genomic Divergence in Atlantic Cod (Gadus morhua L.).

Berg PR, Jentoft S, Star B, Ring KH, Knutsen H, Lien S, Jakobsen KS, André C.

Genome Biol Evol. 2015 May 20;7(6):1644-63. doi: 10.1093/gbe/evv093.

26.

Unexpected interaction with dispersed crude oil droplets drives severe toxicity in Atlantic haddock embryos.

Sørhus E, Edvardsen RB, Karlsen Ø, Nordtug T, van der Meeren T, Thorsen A, Harman C, Jentoft S, Meier S.

PLoS One. 2015 Apr 29;10(4):e0124376. doi: 10.1371/journal.pone.0124376. eCollection 2015.

27.

Evolutionary history and adaptive significance of the polymorphic Pan I in migratory and stationary populations of Atlantic cod (Gadus morhua).

Andersen Ø, Johnsen H, De Rosa MC, Præbel K, Stjelja S, Kirubakaran TG, Pirolli D, Jentoft S, Fevolden SE.

Mar Genomics. 2015 Aug;22:45-54. doi: 10.1016/j.margen.2015.03.009. Epub 2015 Mar 31.

PMID:
25839752
28.

Differences in participation rates and lessons learned about recruitment of participants--the European Health Examination Survey Pilot Project.

Tolonen H, Ahonen S, Jentoft S, Kuulasmaa K, Heldal J; European Health Examination Pilot Project.

Scand J Public Health. 2015 Mar;43(2):212-9. doi: 10.1177/1403494814565692. Epub 2015 Jan 15.

PMID:
25592449
29.

Rhodopsin gene polymorphism associated with divergent light environments in Atlantic cod.

Pampoulie C, Skirnisdottir S, Star B, Jentoft S, Jónsdóttir IG, Hjörleifsson E, Thorsteinsson V, Pálsson ÓK, Berg PR, Andersen Ø, Magnusdottir S, Helyar SJ, Daníelsdóttir AK.

Behav Genet. 2015 Mar;45(2):236-44. doi: 10.1007/s10519-014-9701-7. Epub 2015 Jan 11.

PMID:
25577394
30.

Ancestral duplications and highly dynamic opsin gene evolution in percomorph fishes.

Cortesi F, Musilová Z, Stieb SM, Hart NS, Siebeck UE, Malmstrøm M, Tørresen OK, Jentoft S, Cheney KL, Marshall NJ, Carleton KL, Salzburger W.

Proc Natl Acad Sci U S A. 2015 Feb 3;112(5):1493-8. doi: 10.1073/pnas.1417803112. Epub 2014 Dec 29.

31.

The conserved Phe GH5 of importance for hemoglobin intersubunit contact is mutated in gadoid fish.

Andersen Ø, De Rosa MC, Yadav P, Pirolli D, Fernandes JM, Berg PR, Jentoft S, Andrè C.

BMC Evol Biol. 2014 Mar 21;14(1):54. doi: 10.1186/1471-2148-14-54.

32.

Palindromic sequence artifacts generated during next generation sequencing library preparation from historic and ancient DNA.

Star B, Nederbragt AJ, Hansen MH, Skage M, Gilfillan GD, Bradbury IR, Pampoulie C, Stenseth NC, Jakobsen KS, Jentoft S.

PLoS One. 2014 Mar 7;9(3):e89676. doi: 10.1371/journal.pone.0089676. eCollection 2014. Erratum in: PLoS One. 2014;9(7):e103170.

33.

Next generation sequencing shows high variation of the intestinal microbial species composition in Atlantic cod caught at a single location.

Star B, Haverkamp TH, Jentoft S, Jakobsen KS.

BMC Microbiol. 2013 Nov 9;13:248. doi: 10.1186/1471-2180-13-248.

34.

Unraveling the evolution of the Atlantic cod's (Gadus morhua L.) alternative immune strategy.

Malmstrøm M, Jentoft S, Gregers TF, Jakobsen KS.

PLoS One. 2013 Sep 3;8(9):e74004. doi: 10.1371/journal.pone.0074004. eCollection 2013. Erratum in: PLoS One. 2013;8(10). doi:10.1371/annotation/18b70612-fd3d-46ce-a04b-652d18c82d5b.

35.

Why does the immune system of Atlantic cod lack MHC II?

Star B, Jentoft S.

Bioessays. 2012 Aug;34(8):648-51. doi: 10.1002/bies.201200005. Epub 2012 Apr 13.

36.

The genome sequence of Atlantic cod reveals a unique immune system.

Star B, Nederbragt AJ, Jentoft S, Grimholt U, Malmstrøm M, Gregers TF, Rounge TB, Paulsen J, Solbakken MH, Sharma A, Wetten OF, Lanzén A, Winer R, Knight J, Vogel JH, Aken B, Andersen O, Lagesen K, Tooming-Klunderud A, Edvardsen RB, Tina KG, Espelund M, Nepal C, Previti C, Karlsen BO, Moum T, Skage M, Berg PR, Gjøen T, Kuhl H, Thorsen J, Malde K, Reinhardt R, Du L, Johansen SD, Searle S, Lien S, Nilsen F, Jonassen I, Omholt SW, Stenseth NC, Jakobsen KS.

Nature. 2011 Aug 10;477(7363):207-10. doi: 10.1038/nature10342.

37.

MPA in labor: securing the Pearl Cays of Nicaragua.

Gonzalez C, Jentoft S.

Environ Manage. 2011 Apr;47(4):617-29. doi: 10.1007/s00267-010-9587-y. Epub 2010 Dec 11.

38.

Effects of stress on growth, cortisol and glucose levels in non-domesticated Eurasian perch (Perca fluviatilis) and domesticated rainbow trout (Oncorhynchus mykiss).

Jentoft S, Aastveit AH, Torjesen PA, Andersen O.

Comp Biochem Physiol A Mol Integr Physiol. 2005 Jul;141(3):353-8.

PMID:
16006163

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