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Quantifying the impact of tissue metabolism on solute transport in feto-placental microvascular networks.

Erlich A, Nye GA, Brownbill P, Jensen OE, Chernyavsky IL.

Interface Focus. 2019 Oct 6;9(5):20190021. doi: 10.1098/rsfs.2019.0021. Epub 2019 Aug 16.


Physical and geometric determinants of transport in fetoplacental microvascular networks.

Erlich A, Pearce P, Mayo RP, Jensen OE, Chernyavsky IL.

Sci Adv. 2019 Apr 17;5(4):eaav6326. doi: 10.1126/sciadv.aav6326. eCollection 2019 Apr.


Decoupling the Roles of Cell Shape and Mechanical Stress in Orienting and Cueing Epithelial Mitosis.

Nestor-Bergmann A, Stooke-Vaughan GA, Goddard GK, Starborg T, Jensen OE, Woolner S.

Cell Rep. 2019 Feb 19;26(8):2088-2100.e4. doi: 10.1016/j.celrep.2019.01.102.


Modelling structural determinants of ventilation heterogeneity: A perturbative approach.

Whitfield CA, Horsley A, Jensen OE.

PLoS One. 2018 Nov 29;13(11):e0208049. doi: 10.1371/journal.pone.0208049. eCollection 2018.


Effect of intermittent inspiratory leaks on measurement of lung clearance index using nitrogen and sulfur hexafluoride.

Whitfield CA, Jensen OE, Horsley A.

ERJ Open Res. 2018 Oct 19;4(4). pii: 00132-2018. doi: 10.1183/23120541.00132-2018. eCollection 2018 Oct.


A Mechanosensitive RhoA Pathway that Protects Epithelia against Acute Tensile Stress.

Acharya BR, Nestor-Bergmann A, Liang X, Gupta S, Duszyc K, Gauquelin E, Gomez GA, Budnar S, Marcq P, Jensen OE, Bryant Z, Yap AS.

Dev Cell. 2018 Nov 19;47(4):439-452.e6. doi: 10.1016/j.devcel.2018.09.016. Epub 2018 Oct 11.


Curvature-Sensitive Kinesin Binding Can Explain Microtubule Ring Formation and Reveals Chaotic Dynamics in a Mathematical Model.

Pearce SP, Heil M, Jensen OE, Jones GW, Prokop A.

Bull Math Biol. 2018 Nov;80(11):3002-3022. doi: 10.1007/s11538-018-0505-4. Epub 2018 Sep 28.


Osmotic and electroosmotic fluid transport across the retinal pigment epithelium: A mathematical model.

Dvoriashyna M, Foss AJE, Gaffney EA, Jensen OE, Repetto R.

J Theor Biol. 2018 Nov 7;456:233-248. doi: 10.1016/j.jtbi.2018.08.009. Epub 2018 Aug 7.


Mechanical characterization of disordered and anisotropic cellular monolayers.

Nestor-Bergmann A, Johns E, Woolner S, Jensen OE.

Phys Rev E. 2018 May;97(5-1):052409. doi: 10.1103/PhysRevE.97.052409.


Three-dimensional plant architecture and sunlit-shaded patterns: a stochastic model of light dynamics in canopies.

Retkute R, Townsend AJ, Murchie EH, Jensen OE, Preston SP.

Ann Bot. 2018 Aug 1;122(2):291-302. doi: 10.1093/aob/mcy067.


Human placental oxygenation in late gestation: experimental and theoretical approaches.

Nye GA, Ingram E, Johnstone ED, Jensen OE, Schneider H, Lewis RM, Chernyavsky IL, Brownbill P.

J Physiol. 2018 Dec;596(23):5523-5534. doi: 10.1113/JP275633. Epub 2018 Feb 25.


Relating cell shape and mechanical stress in a spatially disordered epithelium using a vertex-based model.

Nestor-Bergmann A, Goddard G, Woolner S, Jensen OE.

Math Med Biol. 2018 Mar 16;35(suppl_1):1-27. doi: 10.1093/imammb/dqx008.


Root hydrotropism is controlled via a cortex-specific growth mechanism.

Dietrich D, Pang L, Kobayashi A, Fozard JA, Boudolf V, Bhosale R, Antoni R, Nguyen T, Hiratsuka S, Fujii N, Miyazawa Y, Bae TW, Wells DM, Owen MR, Band LR, Dyson RJ, Jensen OE, King JR, Tracy SR, Sturrock CJ, Mooney SJ, Roberts JA, Bhalerao RP, Dinneny JR, Rodriguez PL, Nagatani A, Hosokawa Y, Baskin TI, Pridmore TP, De Veylder L, Takahashi H, Bennett MJ.

Nat Plants. 2017 May 8;3:17057. doi: 10.1038/nplants.2017.57.


Corrigendum: Airway and Parenchymal Strains during Bronchoconstriction in the Precision Cut Lung Slice.

Hiorns JE, Bidan CM, Jensen OE, Gosens R, Kistemaker LE, Fredberg JJ, Butler JP, Krishnan R, Brook BS.

Front Physiol. 2017 Feb 28;8:117. doi: 10.3389/fphys.2017.00117. eCollection 2017.


Drop spreading with random viscosity.

Xu F, Jensen OE.

Proc Math Phys Eng Sci. 2016 Oct;472(2194):20160270.


Stochastic transport in the presence of spatial disorder: Fluctuation-induced corrections to homogenization.

Russell MJ, Jensen OE, Galla T.

Phys Rev E. 2016 Oct;94(4-1):042121. Epub 2016 Oct 17.


Image-Based Modeling of Blood Flow and Oxygen Transfer in Feto-Placental Capillaries.

Pearce P, Brownbill P, Janáček J, Jirkovská M, Kubínová L, Chernyavsky IL, Jensen OE.

PLoS One. 2016 Oct 27;11(10):e0165369. doi: 10.1371/journal.pone.0165369. eCollection 2016.


Hybrid vertex-midline modelling of elongated plant organs.

Fozard JA, Bennett MJ, King JR, Jensen OE.

Interface Focus. 2016 Oct 6;6(5):20160043.


The 4-Dimensional Plant: Effects of Wind-Induced Canopy Movement on Light Fluctuations and Photosynthesis.

Burgess AJ, Retkute R, Preston SP, Jensen OE, Pound MP, Pridmore TP, Murchie EH.

Front Plant Sci. 2016 Sep 21;7:1392. eCollection 2016.


Airway and Parenchymal Strains during Bronchoconstriction in the Precision Cut Lung Slice.

Hiorns JE, Bidan CM, Jensen OE, Gosens R, Kistemaker LE, Fredberg JJ, Butler JP, Krishnan R, Brook BS.

Front Physiol. 2016 Jul 21;7:309. doi: 10.3389/fphys.2016.00309. eCollection 2016. Erratum in: Front Physiol. 2017 Feb 28;8:117.


Static and dynamic stress heterogeneity in a multiscale model of the asthmatic airway wall.

Hiorns JE, Jensen OE, Brook BS.

J Appl Physiol (1985). 2016 Jul 1;121(1):233-47. doi: 10.1152/japplphysiol.00715.2015. Epub 2016 May 19.


Ribbon curling via stress relaxation in thin polymer films.

Prior C, Moussou J, Chakrabarti B, Jensen OE, Juel A.

Proc Natl Acad Sci U S A. 2016 Feb 16;113(7):1719-24. doi: 10.1073/pnas.1514626113. Epub 2016 Feb 1.


Patterns of recruitment and injury in a heterogeneous airway network model.

Stewart PS, Jensen OE.

J R Soc Interface. 2015 Oct 6;12(111):20150523. doi: 10.1098/rsif.2015.0523.


High-Resolution Three-Dimensional Structural Data Quantify the Impact of Photoinhibition on Long-Term Carbon Gain in Wheat Canopies in the Field.

Burgess AJ, Retkute R, Pound MP, Foulkes J, Preston SP, Jensen OE, Pridmore TP, Murchie EH.

Plant Physiol. 2015 Oct;169(2):1192-204. doi: 10.1104/pp.15.00722. Epub 2015 Aug 17.


Exploiting heterogeneous environments: does photosynthetic acclimation optimize carbon gain in fluctuating light?

Retkute R, Smith-Unna SE, Smith RW, Burgess AJ, Jensen OE, Johnson GN, Preston SP, Murchie EH.

J Exp Bot. 2015 May;66(9):2437-47. doi: 10.1093/jxb/erv055. Epub 2015 Mar 18.


Multiscale models in the biomechanics of plant growth.

Jensen OE, Fozard JA.

Physiology (Bethesda). 2015 Mar;30(2):159-66. doi: 10.1152/physiol.00030.2014. Review.


Nonlinear compliance modulates dynamic bronchoconstriction in a multiscale airway model.

Hiorns JE, Jensen OE, Brook BS.

Biophys J. 2014 Dec 16;107(12):3030-3042. doi: 10.1016/j.bpj.2014.10.067.


A theoretical model to allow prediction of the CSF pressure from observations of the retinal venous pulse.

Stewart PS, Jensen OE, Foss AJ.

Invest Ophthalmol Vis Sci. 2014 Sep 4;55(10):6319-23. doi: 10.1167/iovs.14-14331.


Mechanical modelling quantifies the functional importance of outer tissue layers during root elongation and bending.

Dyson RJ, Vizcay-Barrena G, Band LR, Fernandes AN, French AP, Fozard JA, Hodgman TC, Kenobi K, Pridmore TP, Stout M, Wells DM, Wilson MH, Bennett MJ, Jensen OE.

New Phytol. 2014 Jun;202(4):1212-22. doi: 10.1111/nph.12764. Epub 2014 Mar 18.


The role of inflammation resolution speed in airway smooth muscle mass accumulation in asthma: insight from a theoretical model.

Chernyavsky IL, Croisier H, Chapman LA, Kimpton LS, Hiorns JE, Brook BS, Jensen OE, Billington CK, Hall IP, Johnson SR.

PLoS One. 2014 Mar 14;9(3):e90162. doi: 10.1371/journal.pone.0090162. eCollection 2014.


Buckling of a growing tissue and the emergence of two-dimensional patterns.

Nelson MR, King JR, Jensen OE.

Math Biosci. 2013 Dec;246(2):229-41. doi: 10.1016/j.mbs.2013.09.008. Epub 2013 Oct 12.


On the role of stress anisotropy in the growth of stems.

Baskin TI, Jensen OE.

J Exp Bot. 2013 Nov;64(15):4697-707. doi: 10.1093/jxb/ert176. Epub 2013 Aug 3. Review.


Vertex-element models for anisotropic growth of elongated plant organs.

Fozard JA, Lucas M, King JR, Jensen OE.

Front Plant Sci. 2013 Jul 10;4:233. doi: 10.3389/fpls.2013.00233. eCollection 2013.


The role of contractile unit reorganization in force generation in airway smooth muscle.

Brook BS, Jensen OE.

Math Med Biol. 2014 Jun;31(2):99-124. doi: 10.1093/imammb/dqs031. Epub 2013 Jan 28.


Buckling as an origin of ordered cuticular patterns in flower petals.

Antoniou Kourounioti RL, Band LR, Fozard JA, Hampstead A, Lovrics A, Moyroud E, Vignolini S, King JR, Jensen OE, Glover BJ.

J R Soc Interface. 2012 Dec 26;10(80):20120847. doi: 10.1098/rsif.2012.0847. Print 2013 Mar 6.


Multiscale systems analysis of root growth and development: modeling beyond the network and cellular scales.

Band LR, Fozard JA, Godin C, Jensen OE, Pridmore T, Bennett MJ, King JR.

Plant Cell. 2012 Oct;24(10):3892-906. doi: 10.1105/tpc.112.101550. Epub 2012 Oct 30. Review.


Early gene regulation of osteogenesis in embryonic stem cells.

Kirkham GR, Lovrics A, Byrne HM, Jensen OE, King JR, Shakesheff KM, Buttery LD.

Integr Biol (Camb). 2012 Dec;4(12):1470-7. doi: 10.1039/c2ib20164j.


A biomechanical model of anther opening reveals the roles of dehydration and secondary thickening.

Nelson MR, Band LR, Dyson RJ, Lessinnes T, Wells DM, Yang C, Everitt NM, Jensen OE, Wilson ZA.

New Phytol. 2012 Dec;196(4):1030-7. doi: 10.1111/j.1469-8137.2012.04329.x. Epub 2012 Sep 21.


Auxin regulates aquaporin function to facilitate lateral root emergence.

Péret B, Li G, Zhao J, Band LR, Voß U, Postaire O, Luu DT, Da Ines O, Casimiro I, Lucas M, Wells DM, Lazzerini L, Nacry P, King JR, Jensen OE, Schäffner AR, Maurel C, Bennett MJ.

Nat Cell Biol. 2012 Oct;14(10):991-8. doi: 10.1038/ncb2573. Epub 2012 Sep 16.


A model of crosslink kinetics in the expanding plant cell wall: yield stress and enzyme action.

Dyson RJ, Band LR, Jensen OE.

J Theor Biol. 2012 Aug 21;307:125-36. doi: 10.1016/j.jtbi.2012.04.035. Epub 2012 May 11.


Growth-induced hormone dilution can explain the dynamics of plant root cell elongation.

Band LR, Úbeda-Tomás S, Dyson RJ, Middleton AM, Hodgman TC, Owen MR, Jensen OE, Bennett MJ, King JR.

Proc Natl Acad Sci U S A. 2012 May 8;109(19):7577-82. doi: 10.1073/pnas.1113632109. Epub 2012 Apr 20.


Techniques for analysing pattern formation in populations of stem cells and their progeny.

Fozard JA, Kirkham GR, Buttery LD, King JR, Jensen OE, Byrne HM.

BMC Bioinformatics. 2011 Oct 12;12:396. doi: 10.1186/1471-2105-12-396.


Transport in the placenta: homogenizing haemodynamics in a disordered medium.

Chernyavsky IL, Leach L, Dryden IL, Jensen OE.

Philos Trans A Math Phys Eng Sci. 2011 Nov 13;369(1954):4162-82. doi: 10.1098/rsta.2011.0170.


Growth-induced buckling of an epithelial layer.

Nelson MR, Howard D, Jensen OE, King JR, Rose FR, Waters SL.

Biomech Model Mechanobiol. 2011 Dec;10(6):883-900. doi: 10.1007/s10237-010-0280-0. Epub 2010 Dec 30.


Theoretical models for coronary vascular biomechanics: progress & challenges.

Waters SL, Alastruey J, Beard DA, Bovendeerd PH, Davies PF, Jayaraman G, Jensen OE, Lee J, Parker KH, Popel AS, Secomb TW, Siebes M, Sherwin SJ, Shipley RJ, Smith NP, van de Vosse FN.

Prog Biophys Mol Biol. 2011 Jan;104(1-3):49-76. doi: 10.1016/j.pbiomolbio.2010.10.001. Epub 2010 Oct 30. Review.


Growth of the chorioallantoic membrane into a rapid-prototyped model pore system: experiments and mathematical model.

Lemon G, Howard D, Yang H, Ratchev SM, Segal JI, Rose FR, Jensen OE, Waters SL, King JR.

Biomech Model Mechanobiol. 2011 Jul;10(4):539-58. doi: 10.1007/s10237-010-0254-2. Epub 2010 Oct 5.


A hybrid approach to multi-scale modelling of cancer.

Osborne JM, Walter A, Kershaw SK, Mirams GR, Fletcher AG, Pathmanathan P, Gavaghan D, Jensen OE, Maini PK, Byrne HM.

Philos Trans A Math Phys Eng Sci. 2010 Nov 13;368(1930):5013-28. doi: 10.1098/rsta.2010.0173.


A mathematical model of intervillous blood flow in the human placentone.

Chernyavsky IL, Jensen OE, Leach L.

Placenta. 2010 Jan;31(1):44-52. doi: 10.1016/j.placenta.2009.11.003. Epub 2009 Nov 27.


A biomechanical model of agonist-initiated contraction in the asthmatic airway.

Brook BS, Peel SE, Hall IP, Politi AZ, Sneyd J, Bai Y, Sanderson MJ, Jensen OE.

Respir Physiol Neurobiol. 2010 Jan 31;170(1):44-58. doi: 10.1016/j.resp.2009.11.006. Epub 2009 Nov 22.


On a biophysical and mathematical model of Pgp-mediated multidrug resistance: understanding the "space-time" dimension of MDR.

Panagiotopoulou V, Richardson G, Jensen OE, Rauch C.

Eur Biophys J. 2010 Jan;39(2):201-11. doi: 10.1007/s00249-009-0555-5. Epub 2009 Nov 4. Review.


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