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Items: 36

1.

Author Correction: Regulatory feedback from nascent RNA to chromatin and transcription.

Skalska L, Beltran-Nebot M, Ule J, Jenner RG.

Nat Rev Mol Cell Biol. 2019 Sep 10. doi: 10.1038/s41580-019-0174-7. [Epub ahead of print]

PMID:
31506602
2.

microRNA-142-mediated repression of phosphodiesterase 3B critically regulates peripheral immune tolerance.

Anandagoda N, Willis JC, Hertweck A, Roberts LB, Jackson I, Gökmen MR, Jenner RG, Howard JK, Lord GM.

J Clin Invest. 2019 Mar 1;129(3):1257-1271. doi: 10.1172/JCI124725. Epub 2019 Feb 11.

3.

Regulatory feedback from nascent RNA to chromatin and transcription.

Skalska L, Beltran-Nebot M, Ule J, Jenner RG.

Nat Rev Mol Cell Biol. 2017 May;18(5):331-337. doi: 10.1038/nrm.2017.12. Epub 2017 Mar 8. Review. Erratum in: Nat Rev Mol Cell Biol. 2019 Sep 10;:.

PMID:
28270684
4.

Genetic variants alter T-bet binding and gene expression in mucosal inflammatory disease.

Soderquest K, Hertweck A, Giambartolomei C, Henderson S, Mohamed R, Goldberg R, Perucha E, Franke L, Herrero J, Plagnol V, Jenner RG, Lord GM.

PLoS Genet. 2017 Feb 10;13(2):e1006587. doi: 10.1371/journal.pgen.1006587. eCollection 2017 Feb.

5.

T-bet Activates Th1 Genes through Mediator and the Super Elongation Complex.

Hertweck A, Evans CM, Eskandarpour M, Lau JC, Oleinika K, Jackson I, Kelly A, Ambrose J, Adamson P, Cousins DJ, Lavender P, Calder VL, Lord GM, Jenner RG.

Cell Rep. 2016 Jun 21;15(12):2756-70. doi: 10.1016/j.celrep.2016.05.054. Epub 2016 Jun 9.

6.

The interaction of PRC2 with RNA or chromatin is mutually antagonistic.

Beltran M, Yates CM, Skalska L, Dawson M, Reis FP, Viiri K, Fisher CL, Sibley CR, Foster BM, Bartke T, Ule J, Jenner RG.

Genome Res. 2016 Jul;26(7):896-907. doi: 10.1101/gr.197632.115. Epub 2016 May 9.

7.

RUNX super-enhancer control through the Notch pathway by Epstein-Barr virus transcription factors regulates B cell growth.

Gunnell A, Webb HM, Wood CD, McClellan MJ, Wichaidit B, Kempkes B, Jenner RG, Osborne C, Farrell PJ, West MJ.

Nucleic Acids Res. 2016 Jun 2;44(10):4636-50. doi: 10.1093/nar/gkw085. Epub 2016 Feb 15.

8.

HOTAIR and its surrogate DNA methylation signature indicate carboplatin resistance in ovarian cancer.

Teschendorff AE, Lee SH, Jones A, Fiegl H, Kalwa M, Wagner W, Chindera K, Evans I, Dubeau L, Orjalo A, Horlings HM, Niederreiter L, Kaser A, Yang W, Goode EL, Fridley BL, Jenner RG, Berns EM, Wik E, Salvesen HB, Wisman GB, van der Zee AG, Davidson B, Trope CG, Lambrechts S, Vergote I, Calvert H, Jacobs IJ, Widschwendter M.

Genome Med. 2015 Oct 24;7:108. doi: 10.1186/s13073-015-0233-4.

9.

Splicing of a non-coding antisense transcript controls LEF1 gene expression.

Beltran M, Aparicio-Prat E, Mazzolini R, Millanes-Romero A, Massó P, Jenner RG, Díaz VM, Peiró S, de Herreros AG.

Nucleic Acids Res. 2015 Jul 13;43(12):5785-97. doi: 10.1093/nar/gkv502. Epub 2015 May 18.

10.

The Dnmt3L ADD Domain Controls Cytosine Methylation Establishment during Spermatogenesis.

Vlachogiannis G, Niederhuth CE, Tuna S, Stathopoulou A, Viiri K, de Rooij DG, Jenner RG, Schmitz RJ, Ooi SKT.

Cell Rep. 2015 May 12;11(6):990. doi: 10.1016/j.celrep.2015.04.041. Epub 2015 May 12. No abstract available.

11.

Epstein-Barr virus transcription factor Zta acts through distal regulatory elements to directly control cellular gene expression.

Ramasubramanyan S, Osborn K, Al-Mohammad R, Naranjo Perez-Fernandez IB, Zuo J, Balan N, Godfrey A, Patel H, Peters G, Rowe M, Jenner RG, Sinclair AJ.

Nucleic Acids Res. 2015 Apr 20;43(7):3563-77. doi: 10.1093/nar/gkv212. Epub 2015 Mar 16.

12.

The Dnmt3L ADD Domain Controls Cytosine Methylation Establishment during Spermatogenesis.

Vlachogiannis G, Niederhuth CE, Tuna S, Stathopoulou A, Viiri K, de Rooij DG, Jenner RG, Schmitz RJ, Ooi SKT.

Cell Rep. 2015 Feb 17;10(6):944-956. doi: 10.1016/j.celrep.2015.01.021. Epub 2015 Feb 13. Erratum in: Cell Rep. 2015 May 12;11(6):990.

13.

Role and species-specific expression of colon T cell homing receptor GPR15 in colitis.

Nguyen LP, Pan J, Dinh TT, Hadeiba H, O'Hara E 3rd, Ebtikar A, Hertweck A, Gökmen MR, Lord GM, Jenner RG, Butcher EC, Habtezion A.

Nat Immunol. 2015 Feb;16(2):207-213. doi: 10.1038/ni.3079. Epub 2014 Dec 22.

14.

Human immunodeficiency virus Tat associates with a specific set of cellular RNAs.

Bouwman RD, Palser A, Parry CM, Coulter E, Rasaiyaah J, Kellam P, Jenner RG.

Retrovirology. 2014 Jul 3;11:53. doi: 10.1186/1742-4690-11-53.

15.

Genome-wide regulatory analysis reveals that T-bet controls Th17 lineage differentiation through direct suppression of IRF4.

Gökmen MR, Dong R, Kanhere A, Powell N, Perucha E, Jackson I, Howard JK, Hernandez-Fuentes M, Jenner RG, Lord GM.

J Immunol. 2013 Dec 15;191(12):5925-32. doi: 10.4049/jimmunol.1202254. Epub 2013 Nov 18.

16.

Modulation of enhancer looping and differential gene targeting by Epstein-Barr virus transcription factors directs cellular reprogramming.

McClellan MJ, Wood CD, Ojeniyi O, Cooper TJ, Kanhere A, Arvey A, Webb HM, Palermo RD, Harth-Hertle ML, Kempkes B, Jenner RG, West MJ.

PLoS Pathog. 2013 Sep;9(9):e1003636. doi: 10.1371/journal.ppat.1003636. Epub 2013 Sep 12.

17.

Transcription factor interplay in T helper cell differentiation.

Evans CM, Jenner RG.

Brief Funct Genomics. 2013 Nov;12(6):499-511. doi: 10.1093/bfgp/elt025. Epub 2013 Jul 22. Review.

18.

T-bet and GATA3 orchestrate Th1 and Th2 differentiation through lineage-specific targeting of distal regulatory elements.

Kanhere A, Hertweck A, Bhatia U, Gökmen MR, Perucha E, Jackson I, Lord GM, Jenner RG.

Nat Commun. 2012;3:1268. doi: 10.1038/ncomms2260.

19.

The transcription factor T-bet regulates intestinal inflammation mediated by interleukin-7 receptor+ innate lymphoid cells.

Powell N, Walker AW, Stolarczyk E, Canavan JB, Gökmen MR, Marks E, Jackson I, Hashim A, Curtis MA, Jenner RG, Howard JK, Parkhill J, MacDonald TT, Lord GM.

Immunity. 2012 Oct 19;37(4):674-84. doi: 10.1016/j.immuni.2012.09.008. Epub 2012 Oct 11.

20.

Genome-wide analyses of Zta binding to the Epstein-Barr virus genome reveals interactions in both early and late lytic cycles and an epigenetic switch leading to an altered binding profile.

Ramasubramanyan S, Kanhere A, Osborn K, Flower K, Jenner RG, Sinclair AJ.

J Virol. 2012 Dec;86(23):12494-502. doi: 10.1128/JVI.01705-12. Epub 2012 Sep 26.

21.

Downregulation of integrin receptor-signaling genes by Epstein-Barr virus EBNA 3C via promoter-proximal and -distal binding elements.

McClellan MJ, Khasnis S, Wood CD, Palermo RD, Schlick SN, Kanhere AS, Jenner RG, West MJ.

J Virol. 2012 May;86(9):5165-78. doi: 10.1128/JVI.07161-11. Epub 2012 Feb 22.

22.

Noncoding RNA localisation mechanisms in chromatin regulation.

Kanhere A, Jenner RG.

Silence. 2012 Jan 31;3(1):2. doi: 10.1186/1758-907X-3-2.

23.

HIV-1 capsid-cyclophilin interactions determine nuclear import pathway, integration targeting and replication efficiency.

Schaller T, Ocwieja KE, Rasaiyaah J, Price AJ, Brady TL, Roth SL, Hué S, Fletcher AJ, Lee K, KewalRamani VN, Noursadeghi M, Jenner RG, James LC, Bushman FD, Towers GJ.

PLoS Pathog. 2011 Dec;7(12):e1002439. doi: 10.1371/journal.ppat.1002439. Epub 2011 Dec 8.

24.

IL-2 regulates expression of C-MAF in human CD4 T cells.

Rani A, Afzali B, Kelly A, Tewolde-Berhan L, Hackett M, Kanhere AS, Pedroza-Pacheco I, Bowen H, Jurcevic S, Jenner RG, Cousins DJ, Ragheb JA, Lavender P, John S.

J Immunol. 2011 Oct 1;187(7):3721-9. doi: 10.4049/jimmunol.1002354. Epub 2011 Aug 29.

25.

Gyrase B inhibitor impairs HIV-1 replication by targeting Hsp90 and the capsid protein.

Vozzolo L, Loh B, Gane PJ, Tribak M, Zhou L, Anderson I, Nyakatura E, Jenner RG, Selwood D, Fassati A.

J Biol Chem. 2010 Dec 10;285(50):39314-28. doi: 10.1074/jbc.M110.155275. Epub 2010 Oct 11.

26.

Short RNAs are transcribed from repressed polycomb target genes and interact with polycomb repressive complex-2.

Kanhere A, Viiri K, Araújo CC, Rasaiyaah J, Bouwman RD, Whyte WA, Pereira CF, Brookes E, Walker K, Bell GW, Pombo A, Fisher AG, Young RA, Jenner RG.

Mol Cell. 2010 Jun 11;38(5):675-88. doi: 10.1016/j.molcel.2010.03.019.

27.

The transcription factors T-bet and GATA-3 control alternative pathways of T-cell differentiation through a shared set of target genes.

Jenner RG, Townsend MJ, Jackson I, Sun K, Bouwman RD, Young RA, Glimcher LH, Lord GM.

Proc Natl Acad Sci U S A. 2009 Oct 20;106(42):17876-81. doi: 10.1073/pnas.0909357106. Epub 2009 Oct 5.

29.

Control of developmental regulators by Polycomb in human embryonic stem cells.

Lee TI, Jenner RG, Boyer LA, Guenther MG, Levine SS, Kumar RM, Chevalier B, Johnstone SE, Cole MF, Isono K, Koseki H, Fuchikami T, Abe K, Murray HL, Zucker JP, Yuan B, Bell GW, Herbolsheimer E, Hannett NM, Sun K, Odom DT, Otte AP, Volkert TL, Bartel DP, Melton DA, Gifford DK, Jaenisch R, Young RA.

Cell. 2006 Apr 21;125(2):301-13.

30.

Coordinated binding of NF-kappaB family members in the response of human cells to lipopolysaccharide.

Schreiber J, Jenner RG, Murray HL, Gerber GK, Gifford DK, Young RA.

Proc Natl Acad Sci U S A. 2006 Apr 11;103(15):5899-904. Epub 2006 Apr 4.

31.

Core transcriptional regulatory circuitry in human embryonic stem cells.

Boyer LA, Lee TI, Cole MF, Johnstone SE, Levine SS, Zucker JP, Guenther MG, Kumar RM, Murray HL, Jenner RG, Gifford DK, Melton DA, Jaenisch R, Young RA.

Cell. 2005 Sep 23;122(6):947-56.

32.

Global and Hox-specific roles for the MLL1 methyltransferase.

Guenther MG, Jenner RG, Chevalier B, Nakamura T, Croce CM, Canaani E, Young RA.

Proc Natl Acad Sci U S A. 2005 Jun 14;102(24):8603-8. Epub 2005 Jun 7.

33.

Insights into host responses against pathogens from transcriptional profiling.

Jenner RG, Young RA.

Nat Rev Microbiol. 2005 Apr;3(4):281-94. Review.

PMID:
15806094
34.

Kaposi's sarcoma-associated herpesvirus-infected primary effusion lymphoma has a plasma cell gene expression profile.

Jenner RG, Maillard K, Cattini N, Weiss RA, Boshoff C, Wooster R, Kellam P.

Proc Natl Acad Sci U S A. 2003 Sep 2;100(18):10399-404. Epub 2003 Aug 18.

35.

The molecular pathology of Kaposi's sarcoma-associated herpesvirus.

Jenner RG, Boshoff C.

Biochim Biophys Acta. 2002 Mar 14;1602(1):1-22. Review.

PMID:
11960692
36.

Kaposi's sarcoma-associated herpesvirus latent and lytic gene expression as revealed by DNA arrays.

Jenner RG, Albà MM, Boshoff C, Kellam P.

J Virol. 2001 Jan;75(2):891-902.

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