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Items: 1 to 50 of 231

1.

Dynamics of Membrane-Bound G12V-KRAS from Simulations and Single-Molecule FRET in Native Nanodiscs.

Prakash P, Litwin D, Liang H, Sarkar-Banerjee S, Dolino D, Zhou Y, Hancock JF, Jayaraman V, Gorfe AA.

Biophys J. 2020 Jan 7. pii: S0006-3495(19)34432-7. doi: 10.1016/j.bpj.2019.12.032. [Epub ahead of print] No abstract available.

PMID:
31924346
2.

Mechanisms Underlying the Neural Computation of Head Direction.

Hulse BK, Jayaraman V.

Annu Rev Neurosci. 2019 Dec 24. doi: 10.1146/annurev-neuro-072116-031516. [Epub ahead of print]

PMID:
31874068
3.

Generation of stable heading representations in diverse visual scenes.

Kim SS, Hermundstad AM, Romani S, Abbott LF, Jayaraman V.

Nature. 2019 Dec;576(7785):126-131. doi: 10.1038/s41586-019-1767-1. Epub 2019 Nov 20.

PMID:
31748750
4.

Mechanism of modulation of AMPA receptors by TARP-γ8.

Carrillo E, Shaikh SA, Berka V, Durham RJ, Litwin DB, Lee G, MacLean DM, Nowak LM, Jayaraman V.

J Gen Physiol. 2020 Jan 6;152(1). pii: jgp.201912451. doi: 10.1085/jgp.201912451.

PMID:
31748249
5.

Evaluation of the Vibrant DNA microarray for the high-throughput multiplex detection of enteric pathogens in clinical samples.

Yang Y, Rajendran V, Jayaraman V, Wang T, Bei K, Krishna K, Rajasekaran K, Rajasekaran JJ, Krishnamurthy H.

Gut Pathog. 2019 Oct 18;11:51. doi: 10.1186/s13099-019-0329-2. eCollection 2019.

6.

Comparison of ISO and ASTM standards in determining the flexural strength of denture base resin.

Chander NG, Jayaraman V, Sriram V.

Eur Oral Res. 2019 Sep;53(3):137-140. doi: 10.26650/eor.20190072. Epub 2019 Sep 1.

7.

Significance of Anti-TPO as an Early Predictive Marker in Thyroid Disease.

Siriwardhane T, Krishna K, Ranganathan V, Jayaraman V, Wang T, Bei K, Ashman S, Rajasekaran K, Rajasekaran JJ, Krishnamurthy H.

Autoimmune Dis. 2019 Jul 28;2019:1684074. doi: 10.1155/2019/1684074. eCollection 2019.

8.

Identification, isolation and characterization of dolutegravir forced degradation products and their cytotoxicity potential.

Saida SJ, Manikandan A, Kaliyaperumal M, Rumalla CS, Khan AA, Jayaraman VB, Yanaka R, Venkat Rao S.

J Pharm Biomed Anal. 2019 Sep 10;174:588-594. doi: 10.1016/j.jpba.2019.06.022. Epub 2019 Jun 18.

PMID:
31261040
9.

Synergistic effect of band edge potentials on BiFeO3/V2O5 composite: Enhanced photo catalytic activity.

Jayaraman V, Sarkar D, Rajendran R, Palanivel B, Ayappan C, Chellamuthu M, Mani A.

J Environ Manage. 2019 Oct 1;247:104-114. doi: 10.1016/j.jenvman.2019.06.041. Epub 2019 Jun 21.

PMID:
31234045
10.

High-performance calcium sensors for imaging activity in neuronal populations and microcompartments.

Dana H, Sun Y, Mohar B, Hulse BK, Kerlin AM, Hasseman JP, Tsegaye G, Tsang A, Wong A, Patel R, Macklin JJ, Chen Y, Konnerth A, Jayaraman V, Looger LL, Schreiter ER, Svoboda K, Kim DS.

Nat Methods. 2019 Jul;16(7):649-657. doi: 10.1038/s41592-019-0435-6. Epub 2019 Jun 17.

PMID:
31209382
11.

The structural arrangement and dynamics of the heteromeric GluK2/GluK5 kainate receptor as determined by smFRET.

Litwin DB, Paudyal N, Carrillo E, Berka V, Jayaraman V.

Biochim Biophys Acta Biomembr. 2020 Jan 1;1862(1):183001. doi: 10.1016/j.bbamem.2019.05.023. Epub 2019 Jun 11.

PMID:
31194959
12.

Busted! A Dope Ring with Activity Clocked at Dawn and Dusk.

Hulse BK, Jayaraman V.

Neuron. 2019 May 22;102(4):713-715. doi: 10.1016/j.neuron.2019.05.004.

PMID:
31121121
13.

The structural arrangement at intersubunit interfaces in homomeric kainate receptors.

Litwin DB, Carrillo E, Shaikh SA, Berka V, Jayaraman V.

Sci Rep. 2019 May 6;9(1):6969. doi: 10.1038/s41598-019-43360-x.

14.

Visually Guided Behavior and Optogenetically Induced Learning in Head-Fixed Flies Exploring a Virtual Landscape.

Haberkern H, Basnak MA, Ahanonu B, Schauder D, Cohen JD, Bolstad M, Bruns C, Jayaraman V.

Curr Biol. 2019 May 20;29(10):1647-1659.e8. doi: 10.1016/j.cub.2019.04.033. Epub 2019 May 2.

15.

Exploring Systemic Autoimmunity in Thyroid Disease Subjects.

Siriwardhane T, Krishna K, Ranganathan V, Jayaraman V, Wang T, Bei K, Rajasekaran JJ, Krishnamurthy H.

J Immunol Res. 2018 Dec 17;2018:6895146. doi: 10.1155/2018/6895146. eCollection 2018.

16.

Overlap of Characteristic Serological Antibodies in Rheumatoid Arthritis and Wheat-Related Disorders.

Yang Y, Deshpande P, Krishna K, Ranganathan V, Jayaraman V, Wang T, Bei K, Rajasekaran JJ, Krishnamurthy H.

Dis Markers. 2019 Jan 10;2019:4089178. doi: 10.1155/2019/4089178. eCollection 2019.

17.

Insights into cardiovascular risk and nutritional status in subjects with wheat-related disorders.

Siriwardhane T, Krishna K, Devarajan K, Ranganathan V, Jayaraman V, Wang T, Bei K, Rajasekaran JJ, Krishnamurthy H.

Biomarkers. 2019 May;24(3):303-307. doi: 10.1080/1354750X.2019.1578829. Epub 2019 Apr 25.

PMID:
30734586
18.

Single-Molecule FRET Methods to Study Glutamate Receptors.

Litwin DB, Durham RJ, Jayaraman V.

Methods Mol Biol. 2019;1941:3-16. doi: 10.1007/978-1-4939-9077-1_1.

19.

Correction to "Phosphorylation Induces Conformational Rigidity at the C-Terminal Domain of AMPA Receptors".

Chatterjee S, Ade C, Nurik CE, Carrejo NC, Dutta C, Jayaraman V, Landes CF.

J Phys Chem B. 2019 Feb 7;123(5):1214. doi: 10.1021/acs.jpcb.9b00258. Epub 2019 Jan 24. No abstract available.

PMID:
30676747
20.

Dynamics of Membrane-Bound G12V-KRAS from Simulations and Single-Molecule FRET in Native Nanodiscs.

Prakash P, Litwin D, Liang H, Sarkar-Banerjee S, Dolino D, Zhou Y, Hancock JF, Jayaraman V, Gorfe AA.

Biophys J. 2019 Jan 22;116(2):179-183. doi: 10.1016/j.bpj.2018.12.011. Epub 2018 Dec 20. Erratum in: Biophys J. 2020 Jan 7;:.

PMID:
30616834
21.

Phosphorylation Induces Conformational Rigidity at the C-Terminal Domain of AMPA Receptors.

Chatterjee S, Ade C, Nurik CE, Carrejo NC, Dutta C, Jayaraman V, Landes CF.

J Phys Chem B. 2019 Jan 10;123(1):130-137. doi: 10.1021/acs.jpcb.8b10749. Epub 2018 Dec 27. Erratum in: J Phys Chem B. 2019 Feb 7;123(5):1214.

22.

Mapping the Conformational Landscape of Glutamate Receptors Using Single Molecule FRET.

MacLean DM, Durham RJ, Jayaraman V.

Trends Neurosci. 2019 Feb;42(2):128-139. doi: 10.1016/j.tins.2018.10.003. Epub 2018 Oct 29. Review.

PMID:
30385052
23.

Synthetic Neoepitopes of the Transglutaminase-Deamidated Gliadin Complex as Biomarkers for Diagnosing and Monitoring Celiac Disease.

Choung RS, Khaleghi Rostamkolaei S, Ju JM, Marietta EV, Van Dyke CT, Rajasekaran JJ, Jayaraman V, Wang T, Bei K, Rajasekaran KE, Krishna K, Krishnamurthy HK, Murray JA.

Gastroenterology. 2019 Feb;156(3):582-591.e1. doi: 10.1053/j.gastro.2018.10.025. Epub 2018 Oct 17.

PMID:
30342033
24.

Assessment of Barrett's esophagus and dysplasia with ultrahigh-speed volumetric en face and cross-sectional optical coherence tomography.

Ahsen OO, Liang K, Lee HC, Giacomelli MG, Wang Z, Potsaid B, Figueiredo M, Huang Q, Jayaraman V, Fujimoto JG, Mashimo H.

Endoscopy. 2019 Apr;51(4):355-359. doi: 10.1055/a-0725-7995. Epub 2018 Sep 27.

25.

Building a functional connectome of the Drosophila central complex.

Franconville R, Beron C, Jayaraman V.

Elife. 2018 Aug 20;7. pii: e37017. doi: 10.7554/eLife.37017.

26.

High Frequency of Extractable Nuclear Autoantibodies in Wheat-Related Disorders.

Yang Y, Krishna K, Deshpande P, Ranganathan V, Jayaraman V, Wang T, Bei K, Krishnamurthy H.

Biomark Insights. 2018 Jun 18;13:1177271918782893. doi: 10.1177/1177271918782893. eCollection 2018.

27.

Utility and limitations of exome sequencing as a genetic diagnostic tool for children with hearing loss.

Sheppard S, Biswas S, Li MH, Jayaraman V, Slack I, Romasko EJ, Sasson A, Brunton J, Rajagopalan R, Sarmady M, Abrudan JL, Jairam S, DeChene ET, Ying X, Choi J, Wilkens A, Raible SE, Scarano MI, Santani A, Pennington JW, Luo M, Conlin LK, Devkota B, Dulik MC, Spinner NB, Krantz ID.

Genet Med. 2018 Dec;20(12):1663-1676. doi: 10.1038/s41436-018-0004-x. Epub 2018 Jun 15.

28.

Cycloid scanning for wide field optical coherence tomography endomicroscopy and angiography in vivo.

Liang K, Wang Z, Ahsen OO, Lee HC, Potsaid BM, Jayaraman V, Cable A, Mashimo H, Li X, Fujimoto JG.

Optica. 2018 Jan 20;5(1):36-43. doi: 10.1364/OPTICA.5.000036.

29.

The α2δ-1-NMDA Receptor Complex Is Critically Involved in Neuropathic Pain Development and Gabapentin Therapeutic Actions.

Chen J, Li L, Chen SR, Chen H, Xie JD, Sirrieh RE, MacLean DM, Zhang Y, Zhou MH, Jayaraman V, Pan HL.

Cell Rep. 2018 Feb 27;22(9):2307-2321. doi: 10.1016/j.celrep.2018.02.021.

30.

Biochemical characterization and essentiality of Plasmodium fumarate hydratase.

Jayaraman V, Suryavanshi A, Kalale P, Kunala J, Balaram H.

J Biol Chem. 2018 Apr 20;293(16):5878-5894. doi: 10.1074/jbc.M117.816298. Epub 2018 Feb 15.

31.

Microscope-Integrated Intraoperative Ultrahigh-Speed Swept-Source Optical Coherence Tomography for Widefield Retinal and Anterior Segment Imaging.

Lu CD, Waheed NK, Witkin A, Baumal CR, Liu JJ, Potsaid B, Joseph A, Jayaraman V, Cable A, Chan K, Duker JS, Fujimoto JG.

Ophthalmic Surg Lasers Imaging Retina. 2018 Feb 1;49(2):94-102. doi: 10.3928/23258160-20180129-03.

32.

AllerBase: a comprehensive allergen knowledgebase.

Kadam K, Karbhal R, Jayaraman VK, Sawant S, Kulkarni-Kale U.

Database (Oxford). 2017 Jan 1;2017. doi: 10.1093/database/bax066.

33.

Ultrahigh-speed endoscopic optical coherence tomography and angiography enables delineation of lateral margins of endoscopic mucosal resection: a case report.

Ahsen OO, Lee HC, Liang K, Wang Z, Figueiredo M, Huang Q, Potsaid B, Jayaraman V, Fujimoto JG, Mashimo H.

Therap Adv Gastroenterol. 2017 Dec;10(12):931-936. doi: 10.1177/1756283X17739503. Epub 2017 Nov 21. No abstract available.

34.

Biophysics of the Brain: From Molecules to Networks.

Jayaraman V.

Biophys J. 2017 Nov 21;113(10):E1. doi: 10.1016/j.bpj.2017.10.019. Epub 2017 Oct 25. No abstract available.

35.

The structure-energy landscape of NMDA receptor gating.

Dolino DM, Chatterjee S, MacLean DM, Flatebo C, Bishop LDC, Shaikh SA, Landes CF, Jayaraman V.

Nat Chem Biol. 2017 Dec;13(12):1232-1238. doi: 10.1038/nchembio.2487. Epub 2017 Oct 9.

36.

Utility and limitations of exome sequencing in the molecular diagnosis of pediatric inherited platelet disorders.

Romasko EJ, Devkota B, Biswas S, Jayaraman V, Rajagopalan R, Dulik MC, Thom CS, Choi J, Jairam S, Scarano MI, Krantz ID, Spinner NB, Conlin LK, Lambert MP.

Am J Hematol. 2018 Jan;93(1):8-16. doi: 10.1002/ajh.24917. Epub 2017 Oct 20.

37.

Endoscopic forward-viewing optical coherence tomography and angiography with MHz swept source.

Liang K, Ahsen OO, Wang Z, Lee HC, Liang W, Potsaid BM, Tsai TH, Giacomelli MG, Jayaraman V, Mashimo H, Li X, Fujimoto JG.

Opt Lett. 2017 Aug 15;42(16):3193-3196. doi: 10.1364/OL.42.003193.

38.

Neurodevelopmental Disorders Caused by De Novo Variants in KCNB1 Genotypes and Phenotypes.

de Kovel CGF, Syrbe S, Brilstra EH, Verbeek N, Kerr B, Dubbs H, Bayat A, Desai S, Naidu S, Srivastava S, Cagaylan H, Yis U, Saunders C, Rook M, Plugge S, Muhle H, Afawi Z, Klein KM, Jayaraman V, Rajagopalan R, Goldberg E, Marsh E, Kessler S, Bergqvist C, Conlin LK, Krok BL, Thiffault I, Pendziwiat M, Helbig I, Polster T, Borggraefe I, Lemke JR, van den Boogaardt MJ, Møller RS, Koeleman BPC.

JAMA Neurol. 2017 Oct 1;74(10):1228-1236. doi: 10.1001/jamaneurol.2017.1714.

39.

Dual Effects of TARP γ-2 on Glutamate Efficacy Can Account for AMPA Receptor Autoinactivation.

Coombs ID, MacLean DM, Jayaraman V, Farrant M, Cull-Candy SG.

Cell Rep. 2017 Aug 1;20(5):1123-1135. doi: 10.1016/j.celrep.2017.07.014.

40.

Neural signatures of dynamic stimulus selection in Drosophila.

Sun Y, Nern A, Franconville R, Dana H, Schreiter ER, Looger LL, Svoboda K, Kim DS, Hermundstad AM, Jayaraman V.

Nat Neurosci. 2017 Aug;20(8):1104-1113. doi: 10.1038/nn.4581. Epub 2017 Jun 12.

PMID:
28604683
41.

High Precision FRET at Single-molecule Level for Biomolecule Structure Determination.

Ma J, Yanez-Orozco IS, Rezaei Adariani S, Dolino D, Jayaraman V, Sanabria H.

J Vis Exp. 2017 May 13;(123). doi: 10.3791/55623.

42.

Gamified Twitter Microblogging to Support Resident Preparation for the American Board of Surgery In-Service Training Examination.

Lamb LC, DiFiori MM, Jayaraman V, Shames BD, Feeney JM.

J Surg Educ. 2017 Nov - Dec;74(6):986-991. doi: 10.1016/j.jsurg.2017.05.010. Epub 2017 May 22.

PMID:
28545826
43.

Angular velocity integration in a fly heading circuit.

Turner-Evans D, Wegener S, Rouault H, Franconville R, Wolff T, Seelig JD, Druckmann S, Jayaraman V.

Elife. 2017 May 22;6. pii: e23496. doi: 10.7554/eLife.23496.

44.

Ring attractor dynamics in the Drosophila central brain.

Kim SS, Rouault H, Druckmann S, Jayaraman V.

Science. 2017 May 26;356(6340):849-853. doi: 10.1126/science.aal4835. Epub 2017 May 4.

PMID:
28473639
45.

Deactivation kinetics of acid-sensing ion channel 1a are strongly pH-sensitive.

MacLean DM, Jayaraman V.

Proc Natl Acad Sci U S A. 2017 Mar 21;114(12):E2504-E2513. doi: 10.1073/pnas.1620508114. Epub 2017 Mar 6.

46.

Cubic meter volume optical coherence tomography.

Wang Z, Potsaid B, Chen L, Doerr C, Lee HC, Nielson T, Jayaraman V, Cable AE, Swanson E, Fujimoto JG.

Optica. 2016 Dec;3(12):1496-1503. doi: 10.1364/OPTICA.3.001496. Epub 2016 Dec 15.

47.

1.6  kW Yb fiber amplifier using chirped seed amplification for stimulated Brillouin scattering suppression.

White JO, Harfouche M, Edgecumbe J, Satyan N, Rakuljic G, Jayaraman V, Burgner C, Yariv A.

Appl Opt. 2017 Jan 20;56(3):B116-B122. doi: 10.1364/AO.56.00B116.

PMID:
28157874
48.

Immediate Tube Feeding after Percutaneous Endoscopic Gastrostomy: Early Return to Goal Tube Feeds without Added Complications.

Lamb LC, Jayaraman V, Montgomery SC, Umer A, Shapiro DS, Feeney JM.

Conn Med. 2017 Feb;81(2):75-79.

PMID:
29738149
49.

Reliability of lip prints in personal identification: An inter-racial pilot study.

Kumar LB, Jayaraman V, Mathew P, Ramasamy S, Austin RD.

J Forensic Dent Sci. 2016 Sep-Dec;8(3):178. doi: 10.4103/0975-1475.195115.

50.

Dynamic Lipid-dependent Modulation of Protein Topology by Post-translational Phosphorylation.

Vitrac H, MacLean DM, Karlstaedt A, Taegtmeyer H, Jayaraman V, Bogdanov M, Dowhan W.

J Biol Chem. 2017 Feb 3;292(5):1613-1624. doi: 10.1074/jbc.M116.765719. Epub 2016 Dec 14.

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