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Items: 15


Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species.

Maughan PJ, Lee R, Walstead R, Vickerstaff RJ, Fogarty MC, Brouwer CR, Reid RR, Jay JJ, Bekele WA, Jackson EW, Tinker NA, Langdon T, Schlueter JA, Jellen EN.

BMC Biol. 2019 Nov 22;17(1):92. doi: 10.1186/s12915-019-0712-y.


Connecting nutrition composition measures to biomedical research.

Jay JJ, Sanders A, Reid RW, Brouwer CR.

BMC Res Notes. 2018 Dec 12;11(1):883. doi: 10.1186/s13104-018-3997-y.


A Consensus Map in Cultivated Hexaploid Oat Reveals Conserved Grass Synteny with Substantial Subgenome Rearrangement.

Chaffin AS, Huang YF, Smith S, Bekele WA, Babiker E, Gnanesh BN, Foresman BJ, Blanchard SG, Jay JJ, Reid RW, Wight CP, Chao S, Oliver R, Islamovic E, Kolb FL, McCartney C, Mitchell Fetch JW, Beattie AD, Bjørnstad Å, Bonman JM, Langdon T, Howarth CJ, Brouwer CR, Jellen EN, Klos KE, Poland JA, Hsieh TF, Brown R, Jackson E, Schlueter JA, Tinker NA.

Plant Genome. 2016 Jul;9(2). doi: 10.3835/plantgenome2015.10.0102.


Lollipops in the Clinic: Information Dense Mutation Plots for Precision Medicine.

Jay JJ, Brouwer C.

PLoS One. 2016 Aug 4;11(8):e0160519. doi: 10.1371/journal.pone.0160519. eCollection 2016.


Cross-Species Integrative Functional Genomics in GeneWeaver Reveals a Role for Pafah1b1 in Altered Response to Alcohol.

Bubier JA, Wilcox TD, Jay JJ, Langston MA, Baker EJ, Chesler EJ.

Front Behav Neurosci. 2016 Jan 21;10:1. doi: 10.3389/fnbeh.2016.00001. eCollection 2016.


Identification of a QTL in Mus musculus for alcohol preference, withdrawal, and Ap3m2 expression using integrative functional genomics and precision genetics.

Bubier JA, Jay JJ, Baker CL, Bergeson SE, Ohno H, Metten P, Crabbe JC, Chesler EJ.

Genetics. 2014 Aug;197(4):1377-93. doi: 10.1534/genetics.114.166165. Epub 2014 Jun 11.


Performing integrative functional genomics analysis in

Jay JJ, Chesler EJ.

Methods Mol Biol. 2014;1101:13-29. doi: 10.1007/978-1-62703-721-1_2.


High-precision genetic mapping of behavioral traits in the diversity outbred mouse population.

Logan RW, Robledo RF, Recla JM, Philip VM, Bubier JA, Jay JJ, Harwood C, Wilcox T, Gatti DM, Bult CJ, Churchill GA, Chesler EJ.

Genes Brain Behav. 2013 Jun;12(4):424-37. doi: 10.1111/gbb.12029. Epub 2013 Mar 20.


Cross species integration of functional genomics experiments.

Jay JJ.

Int Rev Neurobiol. 2012;104:1-24. doi: 10.1016/B978-0-12-398323-7.00001-X. Review.


A systematic comparison of genome-scale clustering algorithms.

Jay JJ, Eblen JD, Zhang Y, Benson M, Perkins AD, Saxton AM, Voy BH, Chesler EJ, Langston MA.

BMC Bioinformatics. 2012 Jun 25;13 Suppl 10:S7. doi: 10.1186/1471-2105-13-S10-S7.


GeneWeaver: a web-based system for integrative functional genomics.

Baker EJ, Jay JJ, Bubier JA, Langston MA, Chesler EJ.

Nucleic Acids Res. 2012 Jan;40(Database issue):D1067-76. doi: 10.1093/nar/gkr968. Epub 2011 Nov 12.


Autism candidate genes via mouse phenomics.

Meehan TF, Carr CJ, Jay JJ, Bult CJ, Chesler EJ, Blake JA.

J Biomed Inform. 2011 Dec;44 Suppl 1:S5-11. doi: 10.1016/j.jbi.2011.03.003. Epub 2011 Mar 21.


Complete genome sequence of Francisella tularensis subspecies holarctica FTNF002-00.

Barabote RD, Xie G, Brettin TS, Hinrichs SH, Fey PD, Jay JJ, Engle JL, Godbole SD, Noronha JM, Scheuermann RH, Zhou LW, Lion C, Dempsey MP.

PLoS One. 2009 Sep 16;4(9):e7041. doi: 10.1371/journal.pone.0007041.


Ontological Discovery Environment: a system for integrating gene-phenotype associations.

Baker EJ, Jay JJ, Philip VM, Zhang Y, Li Z, Kirova R, Langston MA, Chesler EJ.

Genomics. 2009 Dec;94(6):377-87. doi: 10.1016/j.ygeno.2009.08.016. Epub 2009 Sep 3.


Molecular analysis of Francisella tularensis subspecies tularensis and holarctica.

Fey PD, Dempsey MM, Olson ME, Chrustowski MS, Engle JL, Jay JJ, Dobson ME, Kalasinsky KS, Shea AA, Iwen PC, Wickert RC, Francesconi SC, Crawford RM, Hinrichs SH.

Am J Clin Pathol. 2007 Dec;128(6):926-35.


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