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Items: 12


A Quantitative and Predictive Model for RNA Binding by Human Pumilio Proteins.

Jarmoskaite I, Denny SK, Vaidyanathan PP, Becker WR, Andreasson JOL, Layton CJ, Kappel K, Shivashankar V, Sreenivasan R, Das R, Greenleaf WJ, Herschlag D.

Mol Cell. 2019 Jun 6;74(5):966-981.e18. doi: 10.1016/j.molcel.2019.04.012. Epub 2019 May 8.


Blind tests of RNA-protein binding affinity prediction.

Kappel K, Jarmoskaite I, Vaidyanathan PP, Greenleaf WJ, Herschlag D, Das R.

Proc Natl Acad Sci U S A. 2019 Apr 23;116(17):8336-8341. doi: 10.1073/pnas.1819047116. Epub 2019 Apr 8.


Demonstration of protein cooperativity mediated by RNA structure using the human protein PUM2.

Becker WR, Jarmoskaite I, Vaidyanathan PP, Greenleaf WJ, Herschlag D.

RNA. 2019 Jun;25(6):702-712. doi: 10.1261/rna.068585.118. Epub 2019 Mar 26.


Lessons from Enzyme Kinetics Reveal Specificity Principles for RNA-Guided Nucleases in RNA Interference and CRISPR-Based Genome Editing.

Bisaria N, Jarmoskaite I, Herschlag D.

Cell Syst. 2017 Jan 25;4(1):21-29. doi: 10.1016/j.cels.2016.12.010. Review.


Science Educational Outreach Programs That Benefit Students and Scientists.

Clark G, Russell J, Enyeart P, Gracia B, Wessel A, Jarmoskaite I, Polioudakis D, Stuart Y, Gonzalez T, MacKrell A, Rodenbusch S, Stovall GM, Beckham JT, Montgomery M, Tasneem T, Jones J, Simmons S, Roux S.

PLoS Biol. 2016 Feb 4;14(2):e1002368. doi: 10.1371/journal.pbio.1002368. eCollection 2016 Feb.


Hexapeptides that inhibit processing of branched DNA structures induce a dynamic ensemble of Holliday junction conformations.

Cannon B, Kachroo AH, Jarmoskaite I, Jayaram M, Russell R.

J Biol Chem. 2015 Sep 11;290(37):22734-46. doi: 10.1074/jbc.M115.663930. Epub 2015 Jul 24.


DEAD-box protein CYT-19 is activated by exposed helices in a group I intron RNA.

Jarmoskaite I, Bhaskaran H, Seifert S, Russell R.

Proc Natl Acad Sci U S A. 2014 Jul 22;111(29):E2928-36. doi: 10.1073/pnas.1404307111. Epub 2014 Jul 7.


RNA helicase proteins as chaperones and remodelers.

Jarmoskaite I, Russell R.

Annu Rev Biochem. 2014;83:697-725. doi: 10.1146/annurev-biochem-060713-035546. Epub 2014 Mar 12. Review.


The long-range P3 helix of the Tetrahymena ribozyme is disrupted during folding between the native and misfolded conformations.

Mitchell D 3rd, Jarmoskaite I, Seval N, Seifert S, Russell R.

J Mol Biol. 2013 Aug 9;425(15):2670-86. doi: 10.1016/j.jmb.2013.05.008. Epub 2013 May 20.


Toward a molecular understanding of RNA remodeling by DEAD-box proteins.

Russell R, Jarmoskaite I, Lambowitz AM.

RNA Biol. 2013 Jan;10(1):44-55. doi: 10.4161/rna.22210. Epub 2012 Sep 20. Review.


Solution structures of DEAD-box RNA chaperones reveal conformational changes and nucleic acid tethering by a basic tail.

Mallam AL, Jarmoskaite I, Tijerina P, Del Campo M, Seifert S, Guo L, Russell R, Lambowitz AM.

Proc Natl Acad Sci U S A. 2011 Jul 26;108(30):12254-9. doi: 10.1073/pnas.1109566108. Epub 2011 Jul 11.


DEAD-box proteins as RNA helicases and chaperones.

Jarmoskaite I, Russell R.

Wiley Interdiscip Rev RNA. 2011 Jan-Feb;2(1):135-52. doi: 10.1002/wrna.50. Review.

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