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Items: 49

1.

HIV-1 infection modulates IL-24 expression which contributes to cell apoptosis in vitro.

Strumillo ST, Curcio MF, de Carvalho FF Jr, Sucupira MA, Diaz RS, Monteiro HP, Janini LMR.

Cell Biol Int. 2019 Feb 13. doi: 10.1002/cbin.11111. [Epub ahead of print]

PMID:
30761646
2.

Stochastic Modeling and Simulation of Viral Evolution.

Fabreti LG, Castro D, Gorzoni B, Janini LMR, Antoneli F.

Bull Math Biol. 2019 Apr;81(4):1031-1069. doi: 10.1007/s11538-018-00550-4. Epub 2018 Dec 14.

PMID:
30552628
3.

Modulation of epigenetic factors during the early stages of HIV-1 infection in CD4+ T cells in vitro.

Nunes JM, Furtado MN, de Morais Nunes ER, Sucupira MCA, Diaz RS, Janini LMR.

Virology. 2018 Oct;523:41-51. doi: 10.1016/j.virol.2018.07.026. Epub 2018 Aug 2.

PMID:
30077875
4.

Pace of Coreceptor Tropism Switch in HIV-1-Infected Individuals after Recent Infection.

Arif MS, Hunter J, Léda AR, Zukurov JPL, Samer S, Camargo M, Galinskas J, Kallás EG, Komninakis SV, Janini LM, Sucupira MC, Diaz RS.

J Virol. 2017 Sep 12;91(19). pii: e00793-17. doi: 10.1128/JVI.00793-17. Print 2017 Oct 1.

5.

Evidence of Noncompetent HIV after Ex Vivo Purging Among ART-Suppressed Individuals.

Samer S, Namiyama G, Oshiro T, Arif MS, Cardoso da Silva W, Sucupira MCA, Janini LM, Diaz RS.

AIDS Res Hum Retroviruses. 2017 Oct;33(10):993-994. doi: 10.1089/aid.2017.0036. Epub 2017 Jun 20. No abstract available.

PMID:
28632400
6.

Genetic Diversity of HIV-1 Gene vif Among Treatment-Naive Brazilians.

Villanova F, Barreiros M, Janini LM, Diaz RS, Leal É.

AIDS Res Hum Retroviruses. 2017 Sep;33(9):952-959. doi: 10.1089/AID.2016.0230. Epub 2017 May 24.

PMID:
28443724
7.

Correction: Plasma Metabolomics Biosignature According to HIV Stage of Infection, Pace of Disease Progression, Viremia Level and Immunological Response to Treatment.

Scarpellini B, Zanoni M, Sucupira MC, Truong HM, Janini LM, da Silva ID, Diaz RS.

PLoS One. 2017 Feb 24;12(2):e0173164. doi: 10.1371/journal.pone.0173164. eCollection 2017.

8.

Plasma Metabolomics Biosignature According to HIV Stage of Infection, Pace of Disease Progression, Viremia Level and Immunological Response to Treatment.

Scarpellini B, Zanoni M, Sucupira MC, Truong HM, Janini LM, Segurado ID, Diaz RS.

PLoS One. 2016 Dec 12;11(12):e0161920. doi: 10.1371/journal.pone.0161920. eCollection 2016. Erratum in: PLoS One. 2017 Feb 24;12 (2):e0173164. Scarpelini, Bruno [corrected to Scapellini, Bruno].

9.

Estimation of genetic diversity in viral populations from next generation sequencing data with extremely deep coverage.

Zukurov JP, do Nascimento-Brito S, Volpini AC, Oliveira GC, Janini LM, Antoneli F.

Algorithms Mol Biol. 2016 Mar 11;11:2. doi: 10.1186/s13015-016-0064-x. eCollection 2016.

10.

HIV-1 Tropism Determines Different Mutation Profiles in Proviral DNA.

Nascimento-Brito S, Paulo Zukurov J, Maricato JT, Volpini AC, Salim AC, Araújo FM, Coimbra RS, Oliveira GC, Antoneli F, Janini LM.

PLoS One. 2015 Sep 28;10(9):e0139037. doi: 10.1371/journal.pone.0139037. eCollection 2015.

11.

High prevalence and incidence of HIV-1 in a counseling and testing center in the city of Itajaí, Brazil.

Grinberg G, Giron LB, Knoll RK, Galinskas J, Camargo M, Arif MS, Samer S, Janini LM, Sucupira MC, Diaz RS.

Braz J Infect Dis. 2015 Nov-Dec;19(6):631-5. doi: 10.1016/j.bjid.2015.08.001. Epub 2015 Sep 9.

12.

Epigenetic modulations in activated cells early after HIV-1 infection and their possible functional consequences.

Maricato JT, Furtado MN, Takenaka MC, Nunes ER, Fincatti P, Meliso FM, da Silva ID, Jasiulionis MG, Cecília de Araripe Sucupira M, Diaz RS, Janini LM.

PLoS One. 2015 Apr 13;10(4):e0119234. doi: 10.1371/journal.pone.0119234. eCollection 2015.

13.

Prevalence of transmitted HIV-1 antiretroviral resistance among patients initiating antiretroviral therapy in Brazil: a surveillance study using dried blood spots.

de Moraes Soares CM, Vergara TR, Brites C, Brito JD, Grinberg G, Caseiro MM, Correa C, Suffert TA, Pereira FR, Camargo M, Janini LM, Komninakis S, Sucupira MC, Diaz RS.

J Int AIDS Soc. 2014 Sep 22;17:19042. doi: 10.7448/IAS.17.1.19042. eCollection 2014.

14.

In vivo HIV-1 hypermutation and viral loads among antiretroviral-naive Brazilian patients.

de Lima-Stein ML, Alkmim WT, Bizinoto MC, Lopez LF, Burattini MN, Maricato JT, Giron L, Sucupira MC, Diaz RS, Janini LM.

AIDS Res Hum Retroviruses. 2014 Sep;30(9):867-80. doi: 10.1089/AID.2013.0241. Epub 2014 Aug 25.

15.

High rates of human immunodeficiency virus type 1 mutational profiles by single-genome amplification after 48-hour propagation in peripheral blood mononuclear cells at different levels of cell activation.

Russo CT, Alkmim W, Munerato P, Zukurov J, Maricato JT, Sucupira MC, Diaz RS, Janini LM.

Intervirology. 2014;57(5):277-88. doi: 10.1159/000362415. Epub 2014 Jun 28.

16.

Homogenous HIV-1 subtype B quasispecies in Brazilian men and women recently infected via heterosexual transmission.

Gouveia NL, Camargo M, Caseiro MM, Janini LM, Sucupira MC, Diaz RS.

Virus Genes. 2014 Jun;48(3):421-8. doi: 10.1007/s11262-014-1048-x. Epub 2014 Feb 14.

PMID:
24526349
17.

Analysis of HIV-1 protease gene reveals frequent multiple infections followed by recombination among drug treated individuals living in São Paulo and Santos, Brazil.

Nunes ER, Zukurov JP, Maricato JT, Sucupira MC, Diaz RS, Janini LM.

PLoS One. 2014 Jan 3;9(1):e84066. doi: 10.1371/journal.pone.0084066. eCollection 2014.

18.

Codon pairs of the HIV-1 vif gene correlate with CD4+ T cell count.

Bizinoto MC, Yabe S, Leal É, Kishino H, Martins Lde O, de Lima ML, Morais ER, Diaz RS, Janini LM.

BMC Infect Dis. 2013 Apr 11;13:173. doi: 10.1186/1471-2334-13-173.

19.

Virus replication as a phenotypic version of polynucleotide evolution.

Antoneli F, Bosco F, Castro D, Janini LM.

Bull Math Biol. 2013 Apr;75(4):602-28. doi: 10.1007/s11538-013-9822-9. Epub 2013 Feb 15.

PMID:
23413154
20.

Phenotypic susceptibility to antiretrovirals among clades C, F, and B/F recombinant antiretroviral-naive HIV type 1 strains.

Sucupira MC, Munerato P, Silveira J, Santos AF, Janini LM, Soares MA, Diaz RS.

AIDS Res Hum Retroviruses. 2013 Jun;29(6):880-6. doi: 10.1089/AID.2012.0259. Epub 2013 Mar 8.

PMID:
23398474
21.

A recombinant protein based on Trypanosoma cruzi P21 enhances phagocytosis.

Rodrigues AA, Clemente TM, Dos Santos MA, Machado FC, Gomes RG, Moreira HH, Cruz MC, Brígido PC, Dos Santos PC, Martins FA, Bahia D, Maricato JT, Janini LM, Reboredo EH, Mortara RA, da Silva CV.

PLoS One. 2012;7(12):e51384. doi: 10.1371/journal.pone.0051384. Epub 2012 Dec 10.

22.

Intermediate levels of transmitted antiretroviral drug resistance in Midwestern Brazil.

Pfrimer IA, Bizinoto MC, Brandão NA, Camargo M, Sucupira MC, Janini LM, Diaz RS.

AIDS Res Hum Retroviruses. 2013 Feb;29(2):205-6. doi: 10.1089/AID.2012.0012. Epub 2012 Oct 9. No abstract available.

PMID:
22978276
23.

Faster HIV-1 disease progression among Brazilian individuals recently infected with CXCR4-utilizing strains.

Sucupira MC, Sanabani S, Cortes RM, Giret MT, Tomiyama H, Sauer MM, Sabino EC, Janini LM, Kallas EG, Diaz RS.

PLoS One. 2012;7(1):e30292. doi: 10.1371/journal.pone.0030292. Epub 2012 Jan 26.

24.

Differential persistence of transmitted HIV-1 drug resistance mutation classes.

Jain V, Sucupira MC, Bacchetti P, Hartogensis W, Diaz RS, Kallas EG, Janini LM, Liegler T, Pilcher CD, Grant RM, Cortes R, Deeks SG, Hecht FM.

J Infect Dis. 2011 Apr 15;203(8):1174-81. doi: 10.1093/infdis/jiq167.

25.

Analysis of the origin and evolutionary history of HIV-1 CRF28_BF and CRF29_BF reveals a decreasing prevalence in the AIDS epidemic of Brazil.

Ristic N, Zukurov J, Alkmim W, Diaz RS, Janini LM, Chin MP.

PLoS One. 2011 Mar 1;6(3):e17485. doi: 10.1371/journal.pone.0017485. Erratum in: PLoS One. 2011;6(3). doi: 10.1371/annotation/25854e06-a961-4fec-8664-38667cc278b8.

26.

The association between primary antiretroviral resistance and HAART virologic failure in a developing set.

Gagliani LH, Alkmim Maia WT, Sá-Filho D, Janini LM, Sucupira MC, Caseiro MM, Diaz RS.

AIDS Res Hum Retroviruses. 2011 Mar;27(3):251-6. doi: 10.1089/aid.2010.0150. Epub 2010 Oct 26.

PMID:
20977353
27.

Loci polymorphisms of the APOBEC3G gene in HIV type 1-infected Brazilians.

Bizinoto MC, Leal E, Diaz RS, Janini LM.

AIDS Res Hum Retroviruses. 2011 Feb;27(2):137-41. doi: 10.1089/aid.2010.0146. Epub 2010 Sep 28.

PMID:
20874421
28.

The detection of in vivo and in vitro HIV type 1 B/F profiles in Brazil using a real-time PCR assay for five HIV type 1 genomic regions.

Teixeira D, Munerato P, Komninakis SC, Fusuma EE, Janini LM, Sucupira MC, Diaz RS.

AIDS Res Hum Retroviruses. 2010 Sep;26(9):981-90. doi: 10.1089/aid.2010.0023.

PMID:
20707640
29.

Short communication: high polymorphism rates in the HR1 and HR2 gp41 and presence of primary resistance-related mutations in HIV type 1 circulating in Brazil: possible impact on enfuvirtide efficacy.

Teixeira C, de Sá-Filho D, Alkmim W, Janini LM, Diaz RS, Komninakis S.

AIDS Res Hum Retroviruses. 2010 Mar;26(3):307-11. doi: 10.1089/aid.2008.0297.

PMID:
20334566
30.

HIV type 1 antiretroviral resistance mutations in subtypes B, C, and F in the City of São Paulo, Brazil.

Munerato P, Sucupira MC, Oliveros MP, Janini LM, de Souza DF, Pereira AA, Inocencio LA, Diaz RS.

AIDS Res Hum Retroviruses. 2010 Mar;26(3):265-73. doi: 10.1089/aid.2009.0288.

PMID:
20210652
31.

Intrahost and interhost variability of the HIV type 1 nef gene in Brazilian children.

Cavalieri E, Florido C, Leal E, Machado DM, Camargo M, Diaz RS, Janini LM.

AIDS Res Hum Retroviruses. 2009 Nov;25(11):1129-40. doi: 10.1089/aid.2009.0061.

PMID:
19943790
32.

Molecular and structural characterization of HIV-1 subtype B Brazilian isolates with GWGR tetramer at the tip of the V3-loop.

Leal E, Silva WP, Sucupira MC, Janini LM, Diaz RS.

Virology. 2008 Nov 25;381(2):222-9. doi: 10.1016/j.virol.2008.08.029. Epub 2008 Sep 23.

33.

Selective regimes and evolutionary rates of HIV-1 subtype B V3 variants in the Brazilian epidemic.

Diaz RS, Leal E, Sanabani S, Sucupira MC, Tanuri A, Sabino EC, Janini LM.

Virology. 2008 Nov 25;381(2):184-93. doi: 10.1016/j.virol.2008.08.014. Epub 2008 Sep 21.

34.

Profiling resistance-related mutations in the protease region of the pol gene: single genome sequencing of HIV in plasma and peripheral blood mononuclear cells.

Guimarães AP, Sa-Filho DJ, Sucupira MC, Janini LM, Diaz RS.

AIDS Res Hum Retroviruses. 2008 Jul;24(7):969-71. doi: 10.1089/aid.2008.0020.

PMID:
18593345
35.

Variable contexts and levels of hypermutation in HIV-1 proviral genomes recovered from primary peripheral blood mononuclear cells.

Kijak GH, Janini LM, Tovanabutra S, Sanders-Buell E, Arroyo MA, Robb ML, Michael NL, Birx DL, McCutchan FE.

Virology. 2008 Jun 20;376(1):101-11. doi: 10.1016/j.virol.2008.03.017. Epub 2008 Apr 24.

36.

Characterization of the full-length human immunodeficiency virus-1 genome from recently infected subjects in Brazil.

Sa-Filho D, Kallas EG, Sanabani S, Sabino E, Sucupira MC, Sanchez-Rosa AC, Tescarollo G, Tomiyama H, Bassichetto K, Janini LM, Diaz RS.

AIDS Res Hum Retroviruses. 2007 Sep;23(9):1087-94. No abstract available.

PMID:
17919103
37.

High levels of primary antiretroviral resistance genotypic mutations and B/F recombinants in Santos, Brazil.

Sucupira MC, Caseiro MM, Alves K, Tescarollo G, Janini LM, Sabino EC, Castelo A, Page-Shafer K, Diaz RS.

AIDS Patient Care STDS. 2007 Feb;21(2):116-28.

PMID:
17328661
38.

Analysis of the near full length genomes of HIV-1 subtypes B, F and BF recombinant from a cohort of 14 patients in São Paulo, Brazil.

Sanabani S, Kleine Neto W, Kalmar EM, Diaz RS, Janini LM, Sabino EC.

Infect Genet Evol. 2006 Sep;6(5):368-77. Epub 2006 Mar 7.

PMID:
16522378
39.

Full-length genome analysis of human immunodeficiency virus type 1 subtype C in Brazil.

Sanabani S, Neto WK, de Sa Filho DJ, Diaz RS, Munerato P, Janini LM, Sabino EC.

AIDS Res Hum Retroviruses. 2006 Feb;22(2):171-6.

PMID:
16478399
40.

Identification of two HIV type 1 circulating recombinant forms in Brazil.

De Sá Filho DJ, Sucupira MC, Caseiro MM, Sabino EC, Diaz RS, Janini LM.

AIDS Res Hum Retroviruses. 2006 Jan;22(1):1-13. Erratum in: AIDS Res Hum Retroviruses. 2006 Aug;22(8):824. Casiero, Marcos M [corrected to Caseiro, Marcos M].

PMID:
16438639
41.

Duplication of peri-kappaB and NF-kappab sites of the first human immunodeficiency virus type 2 (HIV-2) transmission in Brazil.

Fusuma EE, Caruso SC, Lopez DF, Costa LJ, Janini LM, De Mendonça JS, Kallas EG, Diaz RS.

AIDS Res Hum Retroviruses. 2005 Nov;21(11):965-70.

PMID:
16386115
42.

Analysis of full-length human immunodeficiency virus type 1 genome reveals a variable spectrum of subtypes B and f recombinants in São Paulo, Brazil.

Sa Filho DJ, Sanabani S, Diaz RS, Munerato P, Brunstein A, Fusuma E, Sabino EC, Janini LM.

AIDS Res Hum Retroviruses. 2005 Feb;21(2):145-51.

PMID:
15725753
43.

HIV-1 subtype F in single and dual infections in Puerto Rico: A potential sentinel site for monitoring novel genetic HIV variants in North America.

Flores I, Pieniazek D, Morán N, Soler A, Rodríguez N, Alegría M, Vera M, Janini LM, Bandea CI, Ramos A, Rayfield M, Yamamura Y.

Emerg Infect Dis. 1999 May-Jun;5(3):481-3. No abstract available.

44.

Predominance of human immunodeficiency virus type 2 subtype B in Abidjan, Ivory Coast.

Pieniazek D, Ellenberger D, Janini LM, Ramos AC, Nkengasong J, Sassan-Morokro M, Hu DJ, Coulibally IM, Ekpini E, Bandea C, Tanuri A, Greenberg AE, Wiktor SZ, Rayfield MA.

AIDS Res Hum Retroviruses. 1999 Apr 10;15(6):603-8.

PMID:
10221538
45.

Genetic variation and susceptibilities to protease inhibitors among subtype B and F isolates in Brazil.

Tanuri A, Vicente AC, Otsuki K, Ramos CA, Ferreira OC Jr, Schechter M, Janini LM, Pieniazek D, Rayfield MA.

Antimicrob Agents Chemother. 1999 Feb;43(2):253-8.

46.

Introduction of HIV-2 and multiple HIV-1 subtypes to Lebanon.

Pieniazek D, Baggs J, Hu DJ, Matar GM, Abdelnoor AM, Mokhbat JE, Uwaydah M, Bizri AR, Ramos A, Janini LM, Tanuri A, Fridlund C, Schable C, Heyndrickx L, Rayfield MA, Heneine W.

Emerg Infect Dis. 1998 Oct-Dec;4(4):649-56.

47.

Horizontal and vertical transmission of human immunodeficiency virus type 1 dual infections caused by viruses of subtypes B and C.

Janini LM, Tanuri A, Schechter M, Peralta JM, Vicente AC, Dela Torre N, Pieniazek NJ, Luo CC, Ramos A, Soriano V, Schochetman G, Rayfield MA, Pieniazek D.

J Infect Dis. 1998 Jan;177(1):227-31.

PMID:
9419195
48.

Identification of single and dual infections with distinct subtypes of human immunodeficiency virus type 1 by using restriction fragment length polymorphism analysis.

Janini LM, Pieniazek D, Peralta JM, Schechter M, Tanuri A, Vicente AC, dela Torre N, Pieniazek NJ, Luo CC, Kalish ML, Schochetman G, Rayfield MA.

Virus Genes. 1996;13(1):69-81.

PMID:
8938982
49.

HIV-1 patients may harbor viruses of different phylogenetic subtypes: implications for the evolution of the HIV/AIDS pandemic.

Pieniazek D, Janini LM, Ramos A, Tanuri A, Schechter M, Peralta JM, Vicente AC, Pieniazek NK, Schochetman G, Rayfield MA.

Emerg Infect Dis. 1995 Jul-Sep;1(3):86-8. No abstract available.

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