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Items: 1 to 50 of 88


How do nursing students experience the clinical learning environment and respond to their experiences? A qualitative study.

Najafi Kalyani M, Jamshidi N, Molazem Z, Torabizadeh C, Sharif F.

BMJ Open. 2019 Jul 26;9(7):e028052. doi: 10.1136/bmjopen-2018-028052.


Insights into Dynamic Network States Using Metabolomic Data.

Mostolizadeh R, Dräger A, Jamshidi N.

Methods Mol Biol. 2019;1978:243-258. doi: 10.1007/978-1-4939-9236-2_15.


Acute effects of dietary plant nutrients on transcriptome profiles: evidence from human studies.

Jamshidi N, Mantri N, Cohen MM.

Crit Rev Food Sci Nutr. 2019 Apr 29:1-12. doi: 10.1080/10408398.2019.1608154. [Epub ahead of print]


The hot patient: acute drug-induced hyperthermia.

Jamshidi N, Dawson A.

Aust Prescr. 2019 Feb;42(1):24-28. doi: 10.18773/austprescr.2019.006. Epub 2019 Feb 1. Review. No abstract available. Erratum in: Aust Prescr. 2019 Apr;42(2):79.


Baclofen Response in Alcohol Dependent Patients Concurrently Receiving Antidepressants: Secondary Analysis From the BacALD Study.

Heng S, Jamshidi N, Baillie A, Louie E, Dore G, Phung N, Haber PS, Morley KC.

Front Psychiatry. 2018 Nov 19;9:576. doi: 10.3389/fpsyt.2018.00576. eCollection 2018.


A Review of Baclofen Overdoses in Australia: Calls to a Poisons Information Centre and a Case Series.

Jamshidi N, Morley KC, Cairns R, Dawson A, Haber PS.

Alcohol Alcohol. 2019 Jan 1;54(1):73-78. doi: 10.1093/alcalc/agy082.


Radiomics and radiogenomics of primary liver cancers.

Jeong WK, Jamshidi N, Felker ER, Raman SS, Lu DS.

Clin Mol Hepatol. 2019 Mar;25(1):21-29. doi: 10.3350/cmh.2018.1007. Epub 2018 Nov 16. Review.


Receptor-based Surrogate Subtypes and Discrepancies with Breast Cancer Intrinsic Subtypes: Implications for Image Biomarker Development.

Jamshidi N, Yamamoto S, Gornbein J, Kuo MD.

Radiology. 2018 Oct;289(1):210-217. doi: 10.1148/radiol.2018171118. Epub 2018 Jul 24.


Comparison of grip and pinch strength in young women with and without hyperkyphosis: A cross-sectional study.

Kordi Yoosefinejad A, Ghaffarinejad F, Hemati M, Jamshidi N.

J Back Musculoskelet Rehabil. 2019;32(1):21-26. doi: 10.3233/BMR-170932.


The effect of Knee-Ankle-Foot orthosis stiffness on the parameters of walking.

Abtahi SMA, Jamshidi N, Ghaziasgar A.

Comput Methods Biomech Biomed Engin. 2018 Feb;21(3):201-207. doi: 10.1080/10255842.2018.1438417. Epub 2018 Feb 21. Erratum in: Comput Methods Biomech Biomed Engin. 2018 Feb;21(3):i.


Functional interrogation of Plasmodium genus metabolism identifies species- and stage-specific differences in nutrient essentiality and drug targeting.

Abdel-Haleem AM, Hefzi H, Mineta K, Gao X, Gojobori T, Palsson BO, Lewis NE, Jamshidi N.

PLoS Comput Biol. 2018 Jan 4;14(1):e1005895. doi: 10.1371/journal.pcbi.1005895. eCollection 2018 Jan.


Integrated Host-Pathogen Metabolic Reconstructions.

Raghunathan A, Jamshidi N.

Methods Mol Biol. 2018;1716:197-217. doi: 10.1007/978-1-4939-7528-0_9.


Effects of Different Angles of the Traction Table on Lumbar Spine Ligaments: A Finite Element Study.

Farajpour H, Jamshidi N.

Clin Orthop Surg. 2017 Dec;9(4):480-488. doi: 10.4055/cios.2017.9.4.480. Epub 2017 Nov 10.


Biomechanical assessment of new surgical method instead of kyphoplasty to improve the mechanical behavior of the vertebra: Micro finite element study.

Faradonbeh SAH, Jamshidi N.

World J Orthop. 2017 Nov 18;8(11):829-835. doi: 10.5312/wjo.v8.i11.829. eCollection 2017 Nov 18.


The Emerging Facets of Non-Cancerous Warburg Effect.

Abdel-Haleem AM, Lewis NE, Jamshidi N, Mineta K, Gao X, Gojobori T.

Front Endocrinol (Lausanne). 2017 Oct 23;8:279. doi: 10.3389/fendo.2017.00279. eCollection 2017.


Investigation of the Relationship between Psychological Variables and Sleep Quality in Students of Medical Sciences.

Najafi Kalyani M, Jamshidi N, Salami J, Pourjam E.

Depress Res Treat. 2017;2017:7143547. doi: 10.1155/2017/7143547. Epub 2017 Sep 28.


Quality of Radiomic Features in Glioblastoma Multiforme: Impact of Semi-Automated Tumor Segmentation Software.

Lee M, Woo B, Kuo MD, Jamshidi N, Kim JH.

Korean J Radiol. 2017 May-Jun;18(3):498-509. doi: 10.3348/kjr.2017.18.3.498. Epub 2017 Apr 3.


Multiregional Radiogenomic Assessment of Prostate Microenvironments with Multiparametric MR Imaging and DNA Whole-Exome Sequencing of Prostate Glands with Adenocarcinoma.

Jamshidi N, Margolis DJ, Raman S, Huang J, Reiter RE, Kuo MD.

Radiology. 2017 Jul;284(1):109-119. doi: 10.1148/radiol.2017162827. Epub 2017 Apr 28.


The Clinical Efficacy and Safety of Tulsi in Humans: A Systematic Review of the Literature.

Jamshidi N, Cohen MM.

Evid Based Complement Alternat Med. 2017;2017:9217567. doi: 10.1155/2017/9217567. Epub 2017 Mar 16. Review.


Investigating the effect of external trauma through a dynamic system modeling approach for clustering causality in diabetic foot ulcer development.

Salimi P, Hamedi M, Jamshidi N, Vismeh M.

Med Hypotheses. 2017 Apr;101:37-43. doi: 10.1016/j.mehy.2017.01.025. Epub 2017 Feb 8.


Systems biology analysis of drivers underlying hallmarks of cancer cell metabolism.

Zielinski DC, Jamshidi N, Corbett AJ, Bordbar A, Thomas A, Palsson BO.

Sci Rep. 2017 Jan 25;7:41241. doi: 10.1038/srep41241.


Finite element analysis of post dental implant fixation in drilled mandible sites.

Pirjamalineisiani A, Sarafbidabad M, Jamshidi N, Esfahani FA.

Comput Biol Med. 2017 Feb 1;81:159-166. doi: 10.1016/j.compbiomed.2016.11.012. Epub 2016 Nov 27.


Design, simulation and modelling of auxiliary exoskeleton to improve human gait cycle.

Ashkani O, Maleki A, Jamshidi N.

Australas Phys Eng Sci Med. 2017 Mar;40(1):137-144. doi: 10.1007/s13246-016-0502-6. Epub 2016 Nov 28.


Genomic Adequacy from Solid Tumor Core Needle Biopsies of ex Vivo Tissue and in Vivo Lung Masses: Prospective Study.

Jamshidi N, Huang D, Abtin FG, Loh CT, Kee ST, Suh RD, Yamamoto S, Das K, Dry S, Binder S, Enzmann DR, Kuo MD.

Radiology. 2017 Mar;282(3):903-912. doi: 10.1148/radiol.2016132230. Epub 2016 Oct 18.


An Organic Anion Transporter 1 (OAT1)-centered Metabolic Network.

Liu HC, Jamshidi N, Chen Y, Eraly SA, Cho SY, Bhatnagar V, Wu W, Bush KT, Abagyan R, Palsson BO, Nigam SK.

J Biol Chem. 2016 Sep 9;291(37):19474-86. doi: 10.1074/jbc.M116.745216. Epub 2016 Jul 20.


The Challenges of Nursing Students in the Clinical Learning Environment: A Qualitative Study.

Jamshidi N, Molazem Z, Sharif F, Torabizadeh C, Najafi Kalyani M.

ScientificWorldJournal. 2016;2016:1846178. doi: 10.1155/2016/1846178. Epub 2016 Jun 5.


Transcriptome profiling reveals novel gene expression signatures and regulating transcription factors of TGFβ-induced epithelial-to-mesenchymal transition.

Du L, Yamamoto S, Burnette BL, Huang D, Gao K, Jamshidi N, Kuo MD.

Cancer Med. 2016 Aug;5(8):1962-72. doi: 10.1002/cam4.719. Epub 2016 Jun 18.


Personalized Whole-Cell Kinetic Models of Metabolism for Discovery in Genomics and Pharmacodynamics.

Bordbar A, McCloskey D, Zielinski DC, Sonnenschein N, Jamshidi N, Palsson BO.

Cell Syst. 2015 Oct 28;1(4):283-92. doi: 10.1016/j.cels.2015.10.003. Epub 2015 Oct 28.


Radiogenomic Analysis Demonstrates Associations between (18)F-Fluoro-2-Deoxyglucose PET, Prognosis, and Epithelial-Mesenchymal Transition in Non-Small Cell Lung Cancer.

Yamamoto S, Huang D, Du L, Korn RL, Jamshidi N, Burnette BL, Kuo MD.

Radiology. 2016 Jul;280(1):261-70. doi: 10.1148/radiol.2016160259. Epub 2016 Apr 15.


The radiogenomic risk score stratifies outcomes in a renal cell cancer phase 2 clinical trial.

Jamshidi N, Jonasch E, Zapala M, Korn RL, Brooks JD, Ljungberg B, Kuo MD.

Eur Radiol. 2016 Aug;26(8):2798-807. doi: 10.1007/s00330-015-4082-8. Epub 2015 Nov 11.


Cell scale host-pathogen modeling: another branch in the evolution of constraint-based methods.

Jamshidi N, Raghunathan A.

Front Microbiol. 2015 Oct 6;6:1032. doi: 10.3389/fmicb.2015.01032. eCollection 2015.


Assessment of experimental thermal, numerical, and mandibular drilling factors in implantology.

Pirjamalineisiani A, Jamshidi N, Sarafbidabad M, Soltani N.

Br J Oral Maxillofac Surg. 2016 May;54(4):400-4. doi: 10.1016/j.bjoms.2015.09.017. Epub 2015 Oct 19.


Do genome-scale models need exact solvers or clearer standards?

Ebrahim A, Almaas E, Bauer E, Bordbar A, Burgard AP, Chang RL, Dräger A, Famili I, Feist AM, Fleming RM, Fong SS, Hatzimanikatis V, Herrgård MJ, Holder A, Hucka M, Hyduke D, Jamshidi N, Lee SY, Le Novère N, Lerman JA, Lewis NE, Ma D, Mahadevan R, Maranas C, Nagarajan H, Navid A, Nielsen J, Nielsen LK, Nogales J, Noronha A, Pal C, Palsson BO, Papin JA, Patil KR, Price ND, Reed JL, Saunders M, Senger RS, Sonnenschein N, Sun Y, Thiele I.

Mol Syst Biol. 2015 Oct 14;11(10):831. doi: 10.15252/msb.20156157. No abstract available.


The Radiogenomic Risk Score: Construction of a Prognostic Quantitative, Noninvasive Image-based Molecular Assay for Renal Cell Carcinoma.

Jamshidi N, Jonasch E, Zapala M, Korn RL, Aganovic L, Zhao H, Tumkur Sitaram R, Tibshirani RJ, Banerjee S, Brooks JD, Ljungberg B, Kuo MD.

Radiology. 2015 Oct;277(1):114-23. doi: 10.1148/radiol.2015150800. Epub 2015 Aug 19.


Systems analysis of host-parasite interactions.

Swann J, Jamshidi N, Lewis NE, Winzeler EA.

Wiley Interdiscip Rev Syst Biol Med. 2015 Nov-Dec;7(6):381-400. doi: 10.1002/wsbm.1311. Epub 2015 Aug 26. Review.


Breast Cancer: Radiogenomic Biomarker Reveals Associations among Dynamic Contrast-enhanced MR Imaging, Long Noncoding RNA, and Metastasis.

Yamamoto S, Han W, Kim Y, Du L, Jamshidi N, Huang D, Kim JH, Kuo MD.

Radiology. 2015 May;275(2):384-92. doi: 10.1148/radiol.15142698. Epub 2015 Feb 26.


Manufacturing and finite element assessment of a novel pressure reducing insole for Diabetic Neuropathic patients.

Ghassemi A, Mossayebi AR, Jamshidi N, Naemi R, Karimi MT.

Australas Phys Eng Sci Med. 2015 Mar;38(1):63-70. doi: 10.1007/s13246-014-0319-0. Epub 2014 Dec 24.


Network reconstruction of platelet metabolism identifies metabolic signature for aspirin resistance.

Thomas A, Rahmanian S, Bordbar A, Palsson BØ, Jamshidi N.

Sci Rep. 2014 Jan 29;4:3925. doi: 10.1038/srep03925.


Behind the numbers: Decoding molecular phenotypes with radiogenomics--guiding principles and technical considerations.

Kuo MD, Jamshidi N.

Radiology. 2014 Feb;270(2):320-5. doi: 10.1148/radiol.13132195. No abstract available.


Effectiveness of video information on coronary angiography patients' outcomes.

Jamshidi N, Abbaszadeh A, Kalyani MN, Sharif F.

Collegian. 2013;20(3):153-9.


Illuminating radiogenomic characteristics of glioblastoma multiforme through integration of MR imaging, messenger RNA expression, and DNA copy number variation.

Jamshidi N, Diehn M, Bredel M, Kuo MD.

Radiology. 2014 Jan;270(1):1-2. doi: 10.1148/radiol.13130078. Epub 2013 Oct 28.


A new approach to measure stability during quiet standing.

Taghi Karimi M, Jamshidi N, Bahreinizad H, Bani MS, Omar AH.

Work. 2014;49(4):663-8. doi: 10.3233/WOR-131699.


Multispecific drug transporter Slc22a8 (Oat3) regulates multiple metabolic and signaling pathways.

Wu W, Jamshidi N, Eraly SA, Liu HC, Bush KT, Palsson BO, Nigam SK.

Drug Metab Dispos. 2013 Oct;41(10):1825-34. doi: 10.1124/dmd.113.052647. Epub 2013 Aug 6.


A community-driven global reconstruction of human metabolism.

Thiele I, Swainston N, Fleming RM, Hoppe A, Sahoo S, Aurich MK, Haraldsdottir H, Mo ML, Rolfsson O, Stobbe MD, Thorleifsson SG, Agren R, Bölling C, Bordel S, Chavali AK, Dobson P, Dunn WB, Endler L, Hala D, Hucka M, Hull D, Jameson D, Jamshidi N, Jonsson JJ, Juty N, Keating S, Nookaew I, Le Novère N, Malys N, Mazein A, Papin JA, Price ND, Selkov E Sr, Sigurdsson MI, Simeonidis E, Sonnenschein N, Smallbone K, Sorokin A, van Beek JH, Weichart D, Goryanin I, Nielsen J, Westerhoff HV, Kell DB, Mendes P, Palsson BØ.

Nat Biotechnol. 2013 May;31(5):419-25. doi: 10.1038/nbt.2488. Epub 2013 Mar 3.


Updating and curating metabolic pathways of TB.

Slayden RA, Jackson M, Zucker J, Ramirez MV, Dawson CC, Crew R, Sampson NS, Thomas ST, Jamshidi N, Sisk P, Caspi R, Crick DC, McNeil MR, Pavelka MS, Niederweis M, Siroy A, Dona V, McFadden J, Boshoff H, Lew JM.

Tuberculosis (Edinb). 2013 Jan;93(1):47-59. doi: 10.1016/ Epub 2013 Feb 1. Review.


Parameter optimization for quantitative signal-concentration mapping using spoiled gradient echo MRI.

Hathout G, Jamshidi N.

Radiol Res Pract. 2012;2012:815729. doi: 10.1155/2012/815729. Epub 2012 Nov 5.


Psychological problems in patients awaiting coronary angiography: a preliminary study.

Jamshidi N, Abbaszadeh A, Kalyani MN.

Anadolu Kardiyol Derg. 2013 Feb;13(1):84-5. doi: 10.5152/akd.2013.026. Epub 2012 Nov 16. No abstract available.


Design and testing of statistical methods to classify the severity of steppage gait based on center of pressure data.

Jamshidi N, Esfahani MH, Farzad A, Jamshidi M.

Med Hypotheses. 2012 Sep;79(3):334-7. doi: 10.1016/j.mehy.2012.05.028. Epub 2012 Jun 27.


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